Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.lipid degradation.sphingolipid degradation.ceramidase activities.neutral ceramidase (NCER)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Ceratophyllum demersum 7 1 CH_cde_183 2 2 0.000236939
Cenchrus purpureus GWHAORA00000007 1 CH_cpu_676 2 2 0.000185483
Cenchrus purpureus GWHAORA00000009 1 CH_cpu_827 2 3 0.000556429
Miscanthus sinensis Chr06 1 CH_msi_436 2 2 0.000193193
Miscanthus sinensis Chr05 1 CH_msi_437 2 2 0.000193193
Oryza alta GWHAZTO00000001 1 CH_oal_412 2 2 0.000060454
Panicum hallii Chr05 1 CH_pha_351 2 4 0.000348645
Sorghum bicolor Chr03 1 CH_sbi_282 2 2 0.0000586682
Sequoiadendron giganteum HRSCAF_1 1 CH_sgi_314 4 8 0.000000000121377
Setaria italica scaffold_5 1 CH_sit_291 2 2 0.0000580434
Saccharum spontaneum Chr3D 1 CH_ssp_794 2 2 0.000143154
Setaria viridis Chr_05 1 CH_svi_274 2 2 0.0000521785
Ceratophyllum demersum 7 2 CH_cde_183 2 2 0.000236939
Cenchrus purpureus GWHAORA00000007 2 CH_cpu_676 2 2 0.000185483
Cenchrus purpureus GWHAORA00000009 2 CH_cpu_827 2 3 0.000556429
Miscanthus sinensis Chr06 2 CH_msi_436 2 2 0.000193193
Miscanthus sinensis Chr05 2 CH_msi_437 2 2 0.000193193
Oryza alta GWHAZTO00000001 2 CH_oal_412 2 2 0.000060454
Panicum hallii Chr05 2 CH_pha_351 2 4 0.000348645
Sorghum bicolor Chr03 2 CH_sbi_282 2 2 0.0000586682
Sequoiadendron giganteum HRSCAF_1 2 CH_sgi_314 4 8 0.000000000121377
Setaria italica scaffold_5 2 CH_sit_291 2 2 0.0000580434
Saccharum spontaneum Chr3D 2 CH_ssp_794 2 2 0.000143154
Setaria viridis Chr_05 2 CH_svi_274 2 2 0.0000521785

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001