Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.lipid degradation.fatty acid degradation.auxiliary degradation activities.dienoyl-CoA reductase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cenchrus purpureus GWHAORA00000014 1 CH_cpu_274 4 34 0.0000000615829
Cenchrus purpureus GWHAORA00000005 1 CH_cpu_788 2 2 0.000463707
Digitaria exilis Dexi_CM05836_chr07A 1 CH_dex_444 2 2 0.000100261
Eragrostis curvula Contig30 1 CH_ecu_241 3 6 0.0000000450974
Elaeis guineensis p5_sc00010 1 CH_egu_189 2 3 0.000284185
Miscanthus sinensis Chr11 1 CH_msi_434 2 2 0.000193193
Miscanthus sinensis Chr12 1 CH_msi_435 2 2 0.000193193
Oropetium thomaeum Chromosome_6 1 CH_oth_146 2 2 0.0000711845
Panicum hallii Chr07 1 CH_pha_240 2 2 0.0000581108
Sorghum bicolor Chr06 1 CH_sbi_281 2 2 0.0000586682
Setaria italica scaffold_7 1 CH_sit_290 2 2 0.0000580434
Saccharum spontaneum Chr5D 1 CH_ssp_904 2 2 0.000238589
Setaria viridis Chr_07 1 CH_svi_273 2 2 0.0000521785
Zoysia japonica ssp. nagirizaki Zjn_sc00023.1 1 CH_zjn_146 2 2 0.000110986
Cenchrus purpureus GWHAORA00000014 2 CH_cpu_274 4 34 0.0000000615829
Cenchrus purpureus GWHAORA00000005 2 CH_cpu_788 2 2 0.000463707
Digitaria exilis Dexi_CM05836_chr07A 2 CH_dex_444 2 2 0.000100261
Eragrostis curvula Contig30 2 CH_ecu_241 3 6 0.0000000450974
Elaeis guineensis p5_sc00010 2 CH_egu_189 2 3 0.000284185
Miscanthus sinensis Chr11 2 CH_msi_434 2 2 0.000193193
Miscanthus sinensis Chr12 2 CH_msi_435 2 2 0.000193193
Oropetium thomaeum Chromosome_6 2 CH_oth_146 2 2 0.0000711845
Panicum hallii Chr07 2 CH_pha_240 2 2 0.0000581108
Sorghum bicolor Chr06 2 CH_sbi_281 2 2 0.0000586682
Setaria italica scaffold_7 2 CH_sit_290 2 2 0.0000580434
Saccharum spontaneum Chr5D 2 CH_ssp_904 2 2 0.000238589
Setaria viridis Chr_07 2 CH_svi_273 2 2 0.0000521785
Zoysia japonica ssp. nagirizaki Zjn_sc00023.1 2 CH_zjn_146 2 2 0.000110986

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001