Functional clusters
Information
- Type MapMan
- Description Lipid metabolism.lipid degradation.phospholipase activities.phospholipase A1 activities.phospholipase A1 (PC-PLA1)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr4 | 1 | CH_asa_68 | 5 | 7 | 0.0000000000021976 |
| Aegilops tauschii | 1D | 1 | CH_ata_191 | 3 | 6 | 0.0000407043 |
| Amborella trichopoda | AmTr_v1.0_scaffold00038 | 1 | CH_atr_81 | 4 | 9 | 0.000000039755 |
| Brachypodium distachyon | Bd2 | 1 | CH_bdi_158 | 3 | 5 | 0.0000163063 |
| Cenchrus purpureus | GWHAORA00000006 | 1 | CH_cpu_172 | 6 | 20 | 0.000000000496983 |
| Cenchrus purpureus | GWHAORA00000007 | 1 | CH_cpu_36 | 7 | 8 | 7.35346e-17 |
| Cenchrus purpureus | GWHAORA00000009 | 1 | CH_cpu_743 | 3 | 5 | 0.000316438 |
| Cenchrus purpureus | GWHAORA00000007 | 1 | CH_cpu_744 | 3 | 5 | 0.000316438 |
| Dioscorea dumetorum | contig200 | 1 | CH_ddu_136 | 3 | 4 | 0.0000194682 |
| Dioscorea dumetorum | contig199 | 1 | CH_ddu_196 | 3 | 7 | 0.000170144 |
| Digitaria exilis | Dexi_CM05836_chr05B | 1 | CH_dex_137 | 5 | 18 | 0.00000000947746 |
| Digitaria exilis | Dexi_CM05836_chr05A | 1 | CH_dex_362 | 3 | 4 | 0.0000244792 |
| Digitaria exilis | Dexi_CM05836_chr03B | 1 | CH_dex_532 | 3 | 7 | 0.000213973 |
| Eragrostis curvula | Contig8 | 1 | CH_ecu_139 | 6 | 24 | 0.0000000000992995 |
| Eragrostis curvula | Contig8 | 1 | CH_ecu_251 | 4 | 6 | 0.0000000536651 |
| Eragrostis curvula | 7 | 1 | CH_ecu_94 | 6 | 10 | 0.000000000000155767 |
| Glycine max | Gm18 | 1 | CH_gma_247 | 3 | 3 | 0.00000382712 |
| Glycine max | Gm02 | 1 | CH_gma_294 | 3 | 4 | 0.0000153038 |
| Hordeum vulgare | chr1H | 1 | CH_hvu_345 | 3 | 9 | 0.000200778 |
| Hordeum vulgare | chr3H | 1 | CH_hvu_374 | 3 | 10 | 0.00028675 |
| Lolium perenne | Lp_chr3_0 | 1 | CH_lpe_205 | 3 | 6 | 0.000030015 |
| Lolium perenne | Lp_chr1_0 | 1 | CH_lpe_81 | 5 | 24 | 0.00000000394162 |
| Miscanthus sinensis | Chr16 | 1 | CH_msi_291 | 3 | 4 | 0.0000203725 |
| Miscanthus sinensis | Chr06 | 1 | CH_msi_331 | 3 | 5 | 0.0000509151 |
| Miscanthus sinensis | Chr05 | 1 | CH_msi_391 | 3 | 6 | 0.000101798 |
| Oryza alta | GWHAZTO00000001 | 1 | CH_oal_229 | 4 | 13 | 0.00000103147 |
| Oryza alta | GWHAZTO00000013 | 1 | CH_oal_230 | 4 | 13 | 0.00000103147 |
| Oryza brachyantha | 1 | 1 | CH_obr_197 | 3 | 9 | 0.00007409 |
| Oryza sativa ssp. indica | Chr1 | 1 | CH_osaindica_253 | 3 | 9 | 0.0000960505 |
| Oryza sativa Kitaake | Chr1 | 1 | CH_osak_172 | 4 | 9 | 0.000000160178 |
| Phyllostachys edulis | hic_scaffold_14 | 1 | CH_ped_356 | 3 | 6 | 0.000162972 |
| Phyllostachys edulis | hic_scaffold_16 | 1 | CH_ped_357 | 3 | 6 | 0.000162972 |
| Phyllostachys edulis | hic_scaffold_2 | 1 | CH_ped_515 | 3 | 10 | 0.000976257 |
| Panicum hallii | Chr05 | 1 | CH_pha_268 | 3 | 6 | 0.0000825799 |
| Physcomitrium patens | Chr22 | 1 | CH_ppa_40 | 3 | 4 | 0.000000788338 |
| Sorghum bicolor | Chr10 | 1 | CH_sbi_119 | 4 | 5 | 0.000000032173 |
| Sorghum bicolor | Chr03 | 1 | CH_sbi_306 | 3 | 5 | 0.000104398 |
| Sequoiadendron giganteum | chr1 | 1 | CH_sgi_982 | 3 | 10 | 0.0000704006 |
| Setaria italica | scaffold_5 | 1 | CH_sit_312 | 3 | 5 | 0.000077758 |
| Solanum lycopersicum | SL4.0ch02 | 1 | CH_sly_18 | 12 | 44 | 7.18875e-24 |
| Saccharum spontaneum | Chr7B | 1 | CH_ssp_101 | 6 | 20 | 0.000000000242882 |
| Saccharum spontaneum | Chr7D | 1 | CH_ssp_1104 | 3 | 6 | 0.000498951 |
| Saccharum spontaneum | Chr3B | 1 | CH_ssp_1105 | 3 | 6 | 0.000498951 |
| Saccharum spontaneum | Chr7A | 1 | CH_ssp_134 | 5 | 11 | 0.00000000468678 |
| Saccharum spontaneum | Chr7C | 1 | CH_ssp_577 | 3 | 3 | 0.0000249846 |
| Setaria viridis | Chr_05 | 1 | CH_svi_320 | 3 | 6 | 0.000125637 |
| Triticum aestivum | Chr1B | 1 | CH_tae_1021 | 3 | 4 | 0.0000833432 |
| Triticum aestivum | Chr3A | 1 | CH_tae_1159 | 3 | 5 | 0.000208268 |
| Triticum aestivum | Chr3B | 1 | CH_tae_1160 | 3 | 5 | 0.000208268 |
| Triticum aestivum | Chr1A | 1 | CH_tae_697 | 4 | 9 | 0.00000147066 |
| Triticum aestivum | Chr3A | 1 | CH_tae_918 | 3 | 3 | 0.0000208448 |
| Triticum dicoccoides | 1A | 1 | CH_tdi_435 | 3 | 6 | 0.000144086 |
| Triticum turgidum | chr3B | 1 | CH_ttu_400 | 3 | 3 | 0.0000104614 |
| Triticum turgidum | chr3A | 1 | CH_ttu_462 | 3 | 4 | 0.0000418289 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00036.1 | 1 | CH_zjn_79 | 3 | 4 | 0.000012643 |
| Allium sativum | chr4 | 2 | CH_asa_68 | 5 | 7 | 0.0000000000021976 |
| Aegilops tauschii | 1D | 2 | CH_ata_191 | 3 | 6 | 0.0000407043 |
| Amborella trichopoda | AmTr_v1.0_scaffold00038 | 2 | CH_atr_81 | 4 | 9 | 0.000000039755 |
| Brachypodium distachyon | Bd2 | 2 | CH_bdi_158 | 3 | 5 | 0.0000163063 |
| Cenchrus purpureus | GWHAORA00000006 | 2 | CH_cpu_172 | 6 | 20 | 0.000000000496983 |
| Cenchrus purpureus | GWHAORA00000007 | 2 | CH_cpu_36 | 7 | 8 | 7.35346e-17 |
| Cenchrus purpureus | GWHAORA00000009 | 2 | CH_cpu_743 | 3 | 5 | 0.000316438 |
| Cenchrus purpureus | GWHAORA00000007 | 2 | CH_cpu_744 | 3 | 5 | 0.000316438 |
| Dioscorea dumetorum | contig200 | 2 | CH_ddu_136 | 3 | 4 | 0.0000194682 |
| Dioscorea dumetorum | contig199 | 2 | CH_ddu_196 | 3 | 7 | 0.000170144 |
| Digitaria exilis | Dexi_CM05836_chr05B | 2 | CH_dex_137 | 5 | 18 | 0.00000000947746 |
| Digitaria exilis | Dexi_CM05836_chr05A | 2 | CH_dex_362 | 3 | 4 | 0.0000244792 |
| Digitaria exilis | Dexi_CM05836_chr03B | 2 | CH_dex_532 | 3 | 7 | 0.000213973 |
| Eragrostis curvula | Contig8 | 2 | CH_ecu_139 | 6 | 24 | 0.0000000000992995 |
| Eragrostis curvula | Contig8 | 2 | CH_ecu_251 | 4 | 6 | 0.0000000536651 |
| Eragrostis curvula | 7 | 2 | CH_ecu_94 | 6 | 10 | 0.000000000000155767 |
| Glycine max | Gm18 | 2 | CH_gma_247 | 3 | 3 | 0.00000382712 |
| Glycine max | Gm02 | 2 | CH_gma_294 | 3 | 4 | 0.0000153038 |
| Hordeum vulgare | chr1H | 2 | CH_hvu_345 | 3 | 9 | 0.000200778 |
| Hordeum vulgare | chr3H | 2 | CH_hvu_374 | 3 | 10 | 0.00028675 |
| Lolium perenne | Lp_chr3_0 | 2 | CH_lpe_205 | 3 | 6 | 0.000030015 |
| Lolium perenne | Lp_chr1_0 | 2 | CH_lpe_81 | 5 | 24 | 0.00000000394162 |
| Miscanthus sinensis | Chr16 | 2 | CH_msi_291 | 3 | 4 | 0.0000203725 |
| Miscanthus sinensis | Chr06 | 2 | CH_msi_331 | 3 | 5 | 0.0000509151 |
| Miscanthus sinensis | Chr05 | 2 | CH_msi_391 | 3 | 6 | 0.000101798 |
| Oryza alta | GWHAZTO00000001 | 2 | CH_oal_229 | 4 | 13 | 0.00000103147 |
| Oryza alta | GWHAZTO00000013 | 2 | CH_oal_230 | 4 | 13 | 0.00000103147 |
| Oryza brachyantha | 1 | 2 | CH_obr_197 | 3 | 9 | 0.00007409 |
| Oryza sativa ssp. indica | Chr1 | 2 | CH_osaindica_253 | 3 | 9 | 0.0000960505 |
| Oryza sativa Kitaake | Chr1 | 2 | CH_osak_172 | 4 | 9 | 0.000000160178 |
| Phyllostachys edulis | hic_scaffold_14 | 2 | CH_ped_356 | 3 | 6 | 0.000162972 |
| Phyllostachys edulis | hic_scaffold_16 | 2 | CH_ped_357 | 3 | 6 | 0.000162972 |
| Phyllostachys edulis | hic_scaffold_2 | 2 | CH_ped_515 | 3 | 10 | 0.000976257 |
| Panicum hallii | Chr05 | 2 | CH_pha_268 | 3 | 6 | 0.0000825799 |
| Physcomitrium patens | Chr22 | 2 | CH_ppa_40 | 3 | 4 | 0.000000788338 |
| Sorghum bicolor | Chr10 | 2 | CH_sbi_119 | 4 | 5 | 0.000000032173 |
| Sorghum bicolor | Chr03 | 2 | CH_sbi_306 | 3 | 5 | 0.000104398 |
| Sequoiadendron giganteum | chr1 | 2 | CH_sgi_982 | 3 | 10 | 0.0000704006 |
| Setaria italica | scaffold_5 | 2 | CH_sit_312 | 3 | 5 | 0.000077758 |
| Solanum lycopersicum | SL4.0ch02 | 2 | CH_sly_18 | 12 | 44 | 7.18875e-24 |
| Saccharum spontaneum | Chr7B | 2 | CH_ssp_101 | 6 | 20 | 0.000000000242882 |
| Saccharum spontaneum | Chr7D | 2 | CH_ssp_1104 | 3 | 6 | 0.000498951 |
| Saccharum spontaneum | Chr3B | 2 | CH_ssp_1105 | 3 | 6 | 0.000498951 |
| Saccharum spontaneum | Chr7A | 2 | CH_ssp_134 | 5 | 11 | 0.00000000468678 |
| Saccharum spontaneum | Chr7C | 2 | CH_ssp_577 | 3 | 3 | 0.0000249846 |
| Setaria viridis | Chr_05 | 2 | CH_svi_320 | 3 | 6 | 0.000125637 |
| Triticum aestivum | Chr1B | 2 | CH_tae_1021 | 3 | 4 | 0.0000833432 |
| Triticum aestivum | Chr3A | 2 | CH_tae_1159 | 3 | 5 | 0.000208268 |
| Triticum aestivum | Chr3B | 2 | CH_tae_1160 | 3 | 5 | 0.000208268 |
| Triticum aestivum | Chr1A | 2 | CH_tae_697 | 4 | 9 | 0.00000147066 |
| Triticum aestivum | Chr3A | 2 | CH_tae_918 | 3 | 3 | 0.0000208448 |
| Triticum dicoccoides | 1A | 2 | CH_tdi_435 | 3 | 6 | 0.000144086 |
| Triticum turgidum | chr3B | 2 | CH_ttu_400 | 3 | 3 | 0.0000104614 |
| Triticum turgidum | chr3A | 2 | CH_ttu_462 | 3 | 4 | 0.0000418289 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00036.1 | 2 | CH_zjn_79 | 3 | 4 | 0.000012643 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |