Functional clusters
Information
- Type MapMan
- Description Multi-process regulation.SnRK1-kinase regulatory system.SnRK1-interacting factor (FLZ)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Asparagus officinalis | AsparagusV1_04 | 1 | CH_aof_26 | 5 | 47 | 0.000000742094 |
| Allium sativum | chr4 | 1 | CH_asa_111 | 7 | 66 | 0.00000000207384 |
| Allium sativum | chr1 | 1 | CH_asa_12 | 9 | 14 | 1.79249e-21 |
| Allium sativum | chr5 | 1 | CH_asa_332 | 3 | 3 | 0.0000175044 |
| Aegilops tauschii | 2D | 1 | CH_ata_1 | 19 | 22 | 7.33538e-53 |
| Aegilops tauschii | 6D | 1 | CH_ata_279 | 3 | 5 | 0.000306423 |
| Brachypodium distachyon | Bd5 | 1 | CH_bdi_11 | 7 | 8 | 2.27896e-17 |
| Brachypodium distachyon | Bd3 | 1 | CH_bdi_179 | 3 | 4 | 0.0000592934 |
| Cenchrus purpureus | GWHAORA00000005 | 1 | CH_cpu_116 | 5 | 5 | 0.0000000000117299 |
| Cenchrus purpureus | GWHAORA00000013 | 1 | CH_cpu_242 | 4 | 4 | 0.0000000172464 |
| Cenchrus purpureus | GWHAORA00000014 | 1 | CH_cpu_330 | 6 | 59 | 0.000000340807 |
| Digitaria exilis | Dexi_CM05836_chr01B | 1 | CH_dex_173 | 4 | 4 | 0.0000000546092 |
| Digitaria exilis | Dexi_CM05836_chr01A | 1 | CH_dex_174 | 4 | 4 | 0.0000000546092 |
| Digitaria exilis | Dexi_CM05836_chr07B | 1 | CH_dex_44 | 7 | 11 | 0.0000000000000139436 |
| Digitaria exilis | Dexi_CM05836_chr07A | 1 | CH_dex_62 | 6 | 8 | 0.0000000000013131 |
| Eragrostis curvula | Contig30 | 1 | CH_ecu_101 | 6 | 8 | 0.000000000000247961 |
| Eragrostis curvula | 3 | 1 | CH_ecu_462 | 4 | 15 | 0.0000240157 |
| Eragrostis curvula | 1 | 1 | CH_ecu_47 | 8 | 13 | 5.0895e-18 |
| Hordeum vulgare | chr2H | 1 | CH_hvu_1 | 12 | 14 | 2.36459e-33 |
| Hordeum vulgare | chr6H | 1 | CH_hvu_413 | 3 | 7 | 0.000428103 |
| Lolium perenne | Lp_chr2_0 | 1 | CH_lpe_2 | 12 | 38 | 3.35776e-27 |
| Lolium perenne | Lp_chr6_0 | 1 | CH_lpe_421 | 3 | 10 | 0.000833858 |
| Miscanthus sinensis | Chr08 | 1 | CH_msi_134 | 4 | 4 | 0.0000000424919 |
| Miscanthus sinensis | Chr07 | 1 | CH_msi_135 | 4 | 4 | 0.0000000424919 |
| Miscanthus sinensis | Chr11 | 1 | CH_msi_26 | 7 | 10 | 0.00000000000000316023 |
| Miscanthus sinensis | Chr12 | 1 | CH_msi_33 | 6 | 6 | 0.0000000000000315243 |
| Oryza alta | GWHAZTO00000002 | 1 | CH_oal_109 | 4 | 4 | 0.00000000718876 |
| Oryza alta | GWHAZTO00000014 | 1 | CH_oal_110 | 4 | 4 | 0.00000000718876 |
| Oryza alta | GWHAZTO00000016 | 1 | CH_oal_137 | 4 | 5 | 0.0000000359293 |
| Oryza alta | GWHAZTO00000004 | 1 | CH_oal_169 | 4 | 6 | 0.000000107744 |
| Oryza brachyantha | 2 | 1 | CH_obr_59 | 4 | 4 | 0.0000000112226 |
| Oryza brachyantha | 4 | 1 | CH_obr_93 | 4 | 7 | 0.000000392108 |
| Oryza sativa ssp. indica | Chr4 | 1 | CH_osaindica_55 | 5 | 7 | 0.0000000000737351 |
| Oryza sativa ssp. indica | Chr2 | 1 | CH_osaindica_99 | 4 | 6 | 0.0000000926735 |
| Oryza sativa Kitaake | Chr2 | 1 | CH_osak_157 | 4 | 5 | 0.0000000634962 |
| Oryza sativa Kitaake | Chr4 | 1 | CH_osak_72 | 5 | 5 | 0.00000000000894085 |
| Oryza sativa ssp. japonica | chr02 | 1 | CH_osa_167 | 3 | 3 | 0.0000108779 |
| Oryza sativa ssp. japonica | chr04 | 1 | CH_osa_31 | 5 | 5 | 0.00000000000383851 |
| Oropetium thomaeum | Chromosome_1 | 1 | CH_oth_49 | 4 | 4 | 0.0000000136904 |
| Oropetium thomaeum | Chromosome_6 | 1 | CH_oth_61 | 4 | 5 | 0.0000000684084 |
| Phyllostachys edulis | hic_scaffold_3 | 1 | CH_ped_123 | 4 | 4 | 0.0000000641835 |
| Phyllostachys edulis | hic_scaffold_24 | 1 | CH_ped_124 | 4 | 4 | 0.0000000641835 |
| Phyllostachys edulis | hic_scaffold_23 | 1 | CH_ped_125 | 4 | 4 | 0.0000000641835 |
| Phyllostachys edulis | hic_scaffold_17 | 1 | CH_ped_295 | 3 | 3 | 0.0000617709 |
| Panicum hallii | Chr01 | 1 | CH_pha_108 | 4 | 4 | 0.0000000273038 |
| Panicum hallii | Chr07 | 1 | CH_pha_8 | 8 | 8 | 1.28056e-20 |
| Sorghum bicolor | Chr04 | 1 | CH_sbi_118 | 4 | 4 | 0.0000000280971 |
| Sorghum bicolor | Chr06 | 1 | CH_sbi_27 | 7 | 9 | 6.21278e-16 |
| Sorghum bicolor | Chr05 | 1 | CH_sbi_310 | 3 | 4 | 0.000123496 |
| Secale cereale | GWHASIY00000008 | 1 | CH_sce_433 | 3 | 3 | 0.000030721 |
| Secale cereale | GWHASIY00000002 | 1 | CH_sce_5 | 11 | 13 | 2.68959e-28 |
| Sequoiadendron giganteum | chr1 | 1 | CH_sgi_312 | 4 | 4 | 0.000000000114461 |
| Setaria italica | scaffold_7 | 1 | CH_sit_12 | 8 | 9 | 6.61835e-20 |
| Setaria italica | scaffold_1 | 1 | CH_sit_127 | 4 | 4 | 0.0000000210978 |
| Spirodela polyrhiza | pseudo5 | 1 | CH_spo_41 | 4 | 4 | 0.00000000433625 |
| Saccharum spontaneum | Chr5D | 1 | CH_ssp_1034 | 3 | 4 | 0.000374518 |
| Saccharum spontaneum | Chr5B | 1 | CH_ssp_167 | 5 | 10 | 0.0000000238944 |
| Saccharum spontaneum | Chr4A | 1 | CH_ssp_723 | 3 | 3 | 0.0000937018 |
| Setaria viridis | Chr_07 | 1 | CH_svi_13 | 8 | 8 | 6.02576e-21 |
| Setaria viridis | Chr_01 | 1 | CH_svi_143 | 4 | 5 | 0.0000000987663 |
| Triticum aestivum | Chr2B | 1 | CH_tae_1 | 23 | 23 | 1.0441e-64 |
| Triticum aestivum | Chr6A | 1 | CH_tae_1088 | 3 | 3 | 0.000140107 |
| Triticum aestivum | Chr6B | 1 | CH_tae_1338 | 3 | 4 | 0.000559972 |
| Triticum aestivum | Chr6A | 1 | CH_tae_1339 | 3 | 4 | 0.000559972 |
| Triticum aestivum | Chr4A | 1 | CH_tae_1340 | 3 | 4 | 0.000559972 |
| Triticum aestivum | Chr2D | 1 | CH_tae_2 | 22 | 22 | 1.16258e-61 |
| Triticum aestivum | Chr2A | 1 | CH_tae_6 | 14 | 15 | 2.86042e-36 |
| Triticum dicoccoides | 2B | 1 | CH_tdi_2 | 15 | 19 | 1.55675e-38 |
| Triticum dicoccoides | 2A | 1 | CH_tdi_4 | 13 | 16 | 4.16821e-33 |
| Triticum dicoccoides | 6A | 1 | CH_tdi_469 | 3 | 4 | 0.00020982 |
| Triticum dicoccoides | 6B | 1 | CH_tdi_547 | 3 | 5 | 0.000524192 |
| Triticum turgidum | chr2B | 1 | CH_ttu_1 | 19 | 20 | 3.48006e-52 |
| Triticum turgidum | chr2A | 1 | CH_ttu_3 | 16 | 16 | 3.24421e-44 |
| Triticum turgidum | chr6A | 1 | CH_ttu_489 | 3 | 3 | 0.000076767 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00023.1 | 1 | CH_zjn_15 | 5 | 9 | 0.00000000088675 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00004.1 | 1 | CH_zjn_18 | 5 | 12 | 0.00000000556504 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00007.1 | 1 | CH_zjn_33 | 4 | 6 | 0.000000168022 |
| Zea mays B104 | scaffold5.3054 | 1 | CH_zma-b104_12 | 3 | 3 | 0.00000487768 |
| Zea mays B73 | 2 | 1 | CH_zma_14 | 6 | 6 | 0.0000000000000301908 |
| Zea mays B73 | 5 | 1 | CH_zma_141 | 3 | 3 | 0.0000387465 |
| Zea mays B73 | 4 | 1 | CH_zma_203 | 3 | 4 | 0.000154872 |
| Zostera marina | Chr03 | 1 | CH_zosmarina_183 | 4 | 36 | 0.000372066 |
| Asparagus officinalis | AsparagusV1_04 | 2 | CH_aof_26 | 5 | 47 | 0.000000742094 |
| Allium sativum | chr4 | 2 | CH_asa_111 | 7 | 66 | 0.00000000207384 |
| Allium sativum | chr1 | 2 | CH_asa_12 | 9 | 14 | 1.79249e-21 |
| Allium sativum | chr5 | 2 | CH_asa_332 | 3 | 3 | 0.0000175044 |
| Aegilops tauschii | 2D | 2 | CH_ata_1 | 19 | 22 | 7.33538e-53 |
| Aegilops tauschii | 6D | 2 | CH_ata_279 | 3 | 5 | 0.000306423 |
| Brachypodium distachyon | Bd5 | 2 | CH_bdi_11 | 7 | 8 | 2.27896e-17 |
| Brachypodium distachyon | Bd3 | 2 | CH_bdi_179 | 3 | 4 | 0.0000592934 |
| Cenchrus purpureus | GWHAORA00000005 | 2 | CH_cpu_116 | 5 | 5 | 0.0000000000117299 |
| Cenchrus purpureus | GWHAORA00000013 | 2 | CH_cpu_242 | 4 | 4 | 0.0000000172464 |
| Cenchrus purpureus | GWHAORA00000014 | 2 | CH_cpu_330 | 6 | 59 | 0.000000340807 |
| Digitaria exilis | Dexi_CM05836_chr01B | 2 | CH_dex_173 | 4 | 4 | 0.0000000546092 |
| Digitaria exilis | Dexi_CM05836_chr01A | 2 | CH_dex_174 | 4 | 4 | 0.0000000546092 |
| Digitaria exilis | Dexi_CM05836_chr07B | 2 | CH_dex_44 | 7 | 11 | 0.0000000000000139436 |
| Digitaria exilis | Dexi_CM05836_chr07A | 2 | CH_dex_62 | 6 | 8 | 0.0000000000013131 |
| Eragrostis curvula | Contig30 | 2 | CH_ecu_101 | 6 | 8 | 0.000000000000247961 |
| Eragrostis curvula | 3 | 2 | CH_ecu_462 | 4 | 15 | 0.0000240157 |
| Eragrostis curvula | 1 | 2 | CH_ecu_47 | 8 | 13 | 5.0895e-18 |
| Hordeum vulgare | chr2H | 2 | CH_hvu_1 | 12 | 14 | 2.36459e-33 |
| Hordeum vulgare | chr6H | 2 | CH_hvu_413 | 3 | 7 | 0.000428103 |
| Lolium perenne | Lp_chr2_0 | 2 | CH_lpe_2 | 12 | 38 | 3.35776e-27 |
| Lolium perenne | Lp_chr6_0 | 2 | CH_lpe_421 | 3 | 10 | 0.000833858 |
| Miscanthus sinensis | Chr08 | 2 | CH_msi_134 | 4 | 4 | 0.0000000424919 |
| Miscanthus sinensis | Chr07 | 2 | CH_msi_135 | 4 | 4 | 0.0000000424919 |
| Miscanthus sinensis | Chr11 | 2 | CH_msi_26 | 7 | 10 | 0.00000000000000316023 |
| Miscanthus sinensis | Chr12 | 2 | CH_msi_33 | 6 | 6 | 0.0000000000000315243 |
| Oryza alta | GWHAZTO00000002 | 2 | CH_oal_109 | 4 | 4 | 0.00000000718876 |
| Oryza alta | GWHAZTO00000014 | 2 | CH_oal_110 | 4 | 4 | 0.00000000718876 |
| Oryza alta | GWHAZTO00000016 | 2 | CH_oal_137 | 4 | 5 | 0.0000000359293 |
| Oryza alta | GWHAZTO00000004 | 2 | CH_oal_169 | 4 | 6 | 0.000000107744 |
| Oryza brachyantha | 2 | 2 | CH_obr_59 | 4 | 4 | 0.0000000112226 |
| Oryza brachyantha | 4 | 2 | CH_obr_93 | 4 | 7 | 0.000000392108 |
| Oryza sativa ssp. indica | Chr4 | 2 | CH_osaindica_55 | 5 | 7 | 0.0000000000737351 |
| Oryza sativa ssp. indica | Chr2 | 2 | CH_osaindica_99 | 4 | 6 | 0.0000000926735 |
| Oryza sativa Kitaake | Chr2 | 2 | CH_osak_157 | 4 | 5 | 0.0000000634962 |
| Oryza sativa Kitaake | Chr4 | 2 | CH_osak_72 | 5 | 5 | 0.00000000000894085 |
| Oryza sativa ssp. japonica | chr02 | 2 | CH_osa_167 | 3 | 3 | 0.0000108779 |
| Oryza sativa ssp. japonica | chr04 | 2 | CH_osa_31 | 5 | 5 | 0.00000000000383851 |
| Oropetium thomaeum | Chromosome_1 | 2 | CH_oth_49 | 4 | 4 | 0.0000000136904 |
| Oropetium thomaeum | Chromosome_6 | 2 | CH_oth_61 | 4 | 5 | 0.0000000684084 |
| Phyllostachys edulis | hic_scaffold_3 | 2 | CH_ped_123 | 4 | 4 | 0.0000000641835 |
| Phyllostachys edulis | hic_scaffold_24 | 2 | CH_ped_124 | 4 | 4 | 0.0000000641835 |
| Phyllostachys edulis | hic_scaffold_23 | 2 | CH_ped_125 | 4 | 4 | 0.0000000641835 |
| Phyllostachys edulis | hic_scaffold_17 | 2 | CH_ped_295 | 3 | 3 | 0.0000617709 |
| Panicum hallii | Chr01 | 2 | CH_pha_108 | 4 | 4 | 0.0000000273038 |
| Panicum hallii | Chr07 | 2 | CH_pha_8 | 8 | 8 | 1.28056e-20 |
| Sorghum bicolor | Chr04 | 2 | CH_sbi_118 | 4 | 4 | 0.0000000280971 |
| Sorghum bicolor | Chr06 | 2 | CH_sbi_27 | 7 | 9 | 6.21278e-16 |
| Sorghum bicolor | Chr05 | 2 | CH_sbi_310 | 3 | 4 | 0.000123496 |
| Secale cereale | GWHASIY00000008 | 2 | CH_sce_433 | 3 | 3 | 0.000030721 |
| Secale cereale | GWHASIY00000002 | 2 | CH_sce_5 | 11 | 13 | 2.68959e-28 |
| Sequoiadendron giganteum | chr1 | 2 | CH_sgi_312 | 4 | 4 | 0.000000000114461 |
| Setaria italica | scaffold_7 | 2 | CH_sit_12 | 8 | 9 | 6.61835e-20 |
| Setaria italica | scaffold_1 | 2 | CH_sit_127 | 4 | 4 | 0.0000000210978 |
| Spirodela polyrhiza | pseudo5 | 2 | CH_spo_41 | 4 | 4 | 0.00000000433625 |
| Saccharum spontaneum | Chr5D | 2 | CH_ssp_1034 | 3 | 4 | 0.000374518 |
| Saccharum spontaneum | Chr5B | 2 | CH_ssp_167 | 5 | 10 | 0.0000000238944 |
| Saccharum spontaneum | Chr4A | 2 | CH_ssp_723 | 3 | 3 | 0.0000937018 |
| Setaria viridis | Chr_07 | 2 | CH_svi_13 | 8 | 8 | 6.02576e-21 |
| Setaria viridis | Chr_01 | 2 | CH_svi_143 | 4 | 5 | 0.0000000987663 |
| Triticum aestivum | Chr2B | 2 | CH_tae_1 | 23 | 23 | 1.0441e-64 |
| Triticum aestivum | Chr6A | 2 | CH_tae_1088 | 3 | 3 | 0.000140107 |
| Triticum aestivum | Chr6B | 2 | CH_tae_1338 | 3 | 4 | 0.000559972 |
| Triticum aestivum | Chr6A | 2 | CH_tae_1339 | 3 | 4 | 0.000559972 |
| Triticum aestivum | Chr4A | 2 | CH_tae_1340 | 3 | 4 | 0.000559972 |
| Triticum aestivum | Chr2D | 2 | CH_tae_2 | 22 | 22 | 1.16258e-61 |
| Triticum aestivum | Chr2A | 2 | CH_tae_6 | 14 | 15 | 2.86042e-36 |
| Triticum dicoccoides | 2B | 2 | CH_tdi_2 | 15 | 19 | 1.55675e-38 |
| Triticum dicoccoides | 2A | 2 | CH_tdi_4 | 13 | 16 | 4.16821e-33 |
| Triticum dicoccoides | 6A | 2 | CH_tdi_469 | 3 | 4 | 0.00020982 |
| Triticum dicoccoides | 6B | 2 | CH_tdi_547 | 3 | 5 | 0.000524192 |
| Triticum turgidum | chr2B | 2 | CH_ttu_1 | 19 | 20 | 3.48006e-52 |
| Triticum turgidum | chr2A | 2 | CH_ttu_3 | 16 | 16 | 3.24421e-44 |
| Triticum turgidum | chr6A | 2 | CH_ttu_489 | 3 | 3 | 0.000076767 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00023.1 | 2 | CH_zjn_15 | 5 | 9 | 0.00000000088675 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00004.1 | 2 | CH_zjn_18 | 5 | 12 | 0.00000000556504 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00007.1 | 2 | CH_zjn_33 | 4 | 6 | 0.000000168022 |
| Zea mays B104 | scaffold5.3054 | 2 | CH_zma-b104_12 | 3 | 3 | 0.00000487768 |
| Zea mays B73 | 2 | 2 | CH_zma_14 | 6 | 6 | 0.0000000000000301908 |
| Zea mays B73 | 5 | 2 | CH_zma_141 | 3 | 3 | 0.0000387465 |
| Zea mays B73 | 4 | 2 | CH_zma_203 | 3 | 4 | 0.000154872 |
| Zostera marina | Chr03 | 2 | CH_zosmarina_183 | 4 | 36 | 0.000372066 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |