Functional clusters

Information

  • Type MapMan
  • Description External stimuli response.toxic compounds.arsenic.glutathione-mediated detoxification.phytochelatin synthase (PCS)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cenchrus purpureus GWHAORA00000007 1 CH_cpu_700 3 45 0.000203086
Digitaria exilis Dexi_CM05836_chr05A 1 CH_dex_630 2 2 0.000501303
Digitaria exilis Dexi_CM05836_chr05B 1 CH_dex_631 2 2 0.000501303
Glycine max Gm03 1 CH_gma_379 2 2 0.000113867
Miscanthus sinensis Chr06 1 CH_msi_307 2 2 0.0000321989
Panicum hallii Chr05 1 CH_pha_291 2 3 0.000174327
Populus trichocarpa Chr14 1 CH_ptr_308 2 2 0.0000578001
Sorghum bicolor Chr03 1 CH_sbi_275 2 2 0.0000586682
Secale cereale GWHASIY00000004 1 CH_sce_631 2 2 0.000136587
Setaria italica scaffold_5 1 CH_sit_285 2 2 0.0000580434
Saccharum spontaneum Chr3B 1 CH_ssp_1185 2 2 0.00066805
Setaria viridis Chr_05 1 CH_svi_270 2 2 0.0000521785
Cenchrus purpureus GWHAORA00000007 2 CH_cpu_700 3 45 0.000203086
Digitaria exilis Dexi_CM05836_chr05A 2 CH_dex_630 2 2 0.000501303
Digitaria exilis Dexi_CM05836_chr05B 2 CH_dex_631 2 2 0.000501303
Glycine max Gm03 2 CH_gma_379 2 2 0.000113867
Miscanthus sinensis Chr06 2 CH_msi_307 2 2 0.0000321989
Panicum hallii Chr05 2 CH_pha_291 2 3 0.000174327
Populus trichocarpa Chr14 2 CH_ptr_308 2 2 0.0000578001
Sorghum bicolor Chr03 2 CH_sbi_275 2 2 0.0000586682
Secale cereale GWHASIY00000004 2 CH_sce_631 2 2 0.000136587
Setaria italica scaffold_5 2 CH_sit_285 2 2 0.0000580434
Saccharum spontaneum Chr3B 2 CH_ssp_1185 2 2 0.00066805
Setaria viridis Chr_05 2 CH_svi_270 2 2 0.0000521785

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001