Functional clusters

Information

  • Type MapMan
  • Description External stimuli response.toxic compounds.arsenic.arsenate reductase (HAC)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Ananas comosus LG03 1 CH_aco_112 2 2 0.000248839
Aegilops tauschii 6D 1 CH_ata_106 3 4 0.000000290953
Ceratophyllum demersum 3 1 CH_cde_247 2 2 0.000473878
Cenchrus purpureus GWHAORA00000012 1 CH_cpu_861 3 20 0.000741614
Eragrostis curvula 1 1 CH_ecu_704 2 2 0.000387725
Eragrostis curvula 3 1 CH_ecu_705 2 2 0.000387725
Hordeum vulgare chr6H 1 CH_hvu_167 3 4 0.000000345855
Lolium perenne Lp_chr3_0 1 CH_lpe_437 2 2 0.000899989
Miscanthus sinensis Chr19 1 CH_msi_241 3 6 0.00000373129
Panicum hallii Chr01 1 CH_pha_428 2 2 0.000871662
Physcomitrium patens Chr16 1 CH_ppa_184 2 2 0.000183818
Sorghum bicolor Chr10 1 CH_sbi_429 2 2 0.000586682
Secale cereale GWHASIY00000004 1 CH_sce_266 3 3 0.000000513053
Setaria italica scaffold_4 1 CH_sit_467 2 2 0.00087065
Setaria italica scaffold_1 1 CH_sit_468 2 2 0.00087065
Saccharum spontaneum Chr8D 1 CH_ssp_56 5 10 0.00000000000183828
Setaria viridis Chr_01 1 CH_svi_473 2 2 0.000782677
Setaria viridis Chr_04 1 CH_svi_474 2 2 0.000782677
Triticum aestivum Chr7B 1 CH_tae_1080 3 9 0.000128833
Triticum aestivum Chr6D 1 CH_tae_320 4 4 0.000000000344665
Triticum aestivum Chr6B 1 CH_tae_700 3 3 0.00000153537
Triticum aestivum Chr7D 1 CH_tae_883 3 5 0.0000153482
Triticum dicoccoides 6B 1 CH_tdi_38 6 9 8.08477e-16
Ananas comosus LG03 2 CH_aco_112 2 2 0.000248839
Aegilops tauschii 6D 2 CH_ata_106 3 4 0.000000290953
Ceratophyllum demersum 3 2 CH_cde_247 2 2 0.000473878
Cenchrus purpureus GWHAORA00000012 2 CH_cpu_861 3 20 0.000741614
Eragrostis curvula 1 2 CH_ecu_704 2 2 0.000387725
Eragrostis curvula 3 2 CH_ecu_705 2 2 0.000387725
Hordeum vulgare chr6H 2 CH_hvu_167 3 4 0.000000345855
Lolium perenne Lp_chr3_0 2 CH_lpe_437 2 2 0.000899989
Miscanthus sinensis Chr19 2 CH_msi_241 3 6 0.00000373129
Panicum hallii Chr01 2 CH_pha_428 2 2 0.000871662
Physcomitrium patens Chr16 2 CH_ppa_184 2 2 0.000183818
Sorghum bicolor Chr10 2 CH_sbi_429 2 2 0.000586682
Secale cereale GWHASIY00000004 2 CH_sce_266 3 3 0.000000513053
Setaria italica scaffold_4 2 CH_sit_467 2 2 0.00087065
Setaria italica scaffold_1 2 CH_sit_468 2 2 0.00087065
Saccharum spontaneum Chr8D 2 CH_ssp_56 5 10 0.00000000000183828
Setaria viridis Chr_01 2 CH_svi_473 2 2 0.000782677
Setaria viridis Chr_04 2 CH_svi_474 2 2 0.000782677
Triticum aestivum Chr7B 2 CH_tae_1080 3 9 0.000128833
Triticum aestivum Chr6D 2 CH_tae_320 4 4 0.000000000344665
Triticum aestivum Chr6B 2 CH_tae_700 3 3 0.00000153537
Triticum aestivum Chr7D 2 CH_tae_883 3 5 0.0000153482
Triticum dicoccoides 6B 2 CH_tdi_38 6 9 8.08477e-16

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001