Functional clusters
Information
- Type MapMan
- Description Solute transport.channels.MIP family.plasma membrane intrinsic protein (PIP)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Cenchrus purpureus | GWHAORA00000002 | 1 | CH_cpu_155 | 5 | 11 | 0.000000000207827 |
| Cenchrus purpureus | GWHAORA00000010 | 1 | CH_cpu_216 | 4 | 5 | 0.00000000662347 |
| Eragrostis curvula | 6 | 1 | CH_ecu_311 | 4 | 12 | 0.000000418491 |
| Marchantia polymorpha | scaffold_44 | 1 | CH_mpo_17 | 4 | 4 | 0.000000000848827 |
| Miscanthus sinensis | Chr04 | 1 | CH_msi_111 | 4 | 5 | 0.00000000633286 |
| Miscanthus sinensis | Chr03 | 1 | CH_msi_112 | 4 | 5 | 0.00000000633286 |
| Oryza alta | GWHAZTO00000019 | 1 | CH_oal_130 | 4 | 9 | 0.0000000273685 |
| Oryza alta | GWHAZTO00000007 | 1 | CH_oal_328 | 3 | 6 | 0.0000215646 |
| Oryza brachyantha | 7 | 1 | CH_obr_141 | 3 | 6 | 0.0000176516 |
| Oryza sativa ssp. indica | Chr7 | 1 | CH_osaindica_61 | 4 | 4 | 0.000000000295765 |
| Oryza sativa Kitaake | Chr7 | 1 | CH_osak_116 | 4 | 5 | 0.00000000191218 |
| Oryza sativa ssp. japonica | chr07 | 1 | CH_osa_157 | 3 | 6 | 0.00000501892 |
| Panicum hallii | Chr02 | 1 | CH_pha_183 | 3 | 4 | 0.00000243097 |
| Sorghum bicolor | Chr02 | 1 | CH_sbi_37 | 6 | 12 | 0.0000000000000722328 |
| Sequoiadendron giganteum | chr8 | 1 | CH_sgi_310 | 5 | 8 | 0.00000000010043 |
| Sequoiadendron giganteum | chr2 | 1 | CH_sgi_425 | 4 | 4 | 0.00000000368565 |
| Sequoiadendron giganteum | chr6 | 1 | CH_sgi_698 | 3 | 4 | 0.0000288087 |
| Setaria italica | scaffold_2 | 1 | CH_sit_227 | 3 | 4 | 0.00000444625 |
| Saccharum spontaneum | Chr2C | 1 | CH_ssp_30 | 6 | 7 | 0.00000000000000336092 |
| Setaria viridis | Chr_02 | 1 | CH_svi_213 | 3 | 4 | 0.00000359319 |
| Cenchrus purpureus | GWHAORA00000002 | 2 | CH_cpu_155 | 5 | 11 | 0.000000000207827 |
| Cenchrus purpureus | GWHAORA00000010 | 2 | CH_cpu_216 | 4 | 5 | 0.00000000662347 |
| Eragrostis curvula | 6 | 2 | CH_ecu_311 | 4 | 12 | 0.000000418491 |
| Marchantia polymorpha | scaffold_44 | 2 | CH_mpo_17 | 4 | 4 | 0.000000000848827 |
| Miscanthus sinensis | Chr04 | 2 | CH_msi_111 | 4 | 5 | 0.00000000633286 |
| Miscanthus sinensis | Chr03 | 2 | CH_msi_112 | 4 | 5 | 0.00000000633286 |
| Oryza alta | GWHAZTO00000019 | 2 | CH_oal_130 | 4 | 9 | 0.0000000273685 |
| Oryza alta | GWHAZTO00000007 | 2 | CH_oal_328 | 3 | 6 | 0.0000215646 |
| Oryza brachyantha | 7 | 2 | CH_obr_141 | 3 | 6 | 0.0000176516 |
| Oryza sativa ssp. indica | Chr7 | 2 | CH_osaindica_61 | 4 | 4 | 0.000000000295765 |
| Oryza sativa Kitaake | Chr7 | 2 | CH_osak_116 | 4 | 5 | 0.00000000191218 |
| Oryza sativa ssp. japonica | chr07 | 2 | CH_osa_157 | 3 | 6 | 0.00000501892 |
| Panicum hallii | Chr02 | 2 | CH_pha_183 | 3 | 4 | 0.00000243097 |
| Sorghum bicolor | Chr02 | 2 | CH_sbi_37 | 6 | 12 | 0.0000000000000722328 |
| Sequoiadendron giganteum | chr8 | 2 | CH_sgi_310 | 5 | 8 | 0.00000000010043 |
| Sequoiadendron giganteum | chr2 | 2 | CH_sgi_425 | 4 | 4 | 0.00000000368565 |
| Sequoiadendron giganteum | chr6 | 2 | CH_sgi_698 | 3 | 4 | 0.0000288087 |
| Setaria italica | scaffold_2 | 2 | CH_sit_227 | 3 | 4 | 0.00000444625 |
| Saccharum spontaneum | Chr2C | 2 | CH_ssp_30 | 6 | 7 | 0.00000000000000336092 |
| Setaria viridis | Chr_02 | 2 | CH_svi_213 | 3 | 4 | 0.00000359319 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |