Functional clusters
Information
- Type MapMan
- Description Cellular respiration.oxidative phosphorylation.cytochrome c.CCM cytochrome c maturation system (system I)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aegilops tauschii | 6D | 1 | CH_ata_253 | 3 | 4 | 0.000192534 |
| Aegilops tauschii | 3D | 1 | CH_ata_294 | 3 | 5 | 0.000480958 |
| Solanum lycopersicum | SL4.0ch12 | 1 | CH_sly_534 | 3 | 9 | 0.000666693 |
| Triticum aestivum | Chr7D | 1 | CH_tae_842 | 3 | 3 | 0.00000907887 |
| Aegilops tauschii | 6D | 2 | CH_ata_253 | 3 | 4 | 0.000192534 |
| Aegilops tauschii | 3D | 2 | CH_ata_294 | 3 | 5 | 0.000480958 |
| Solanum lycopersicum | SL4.0ch12 | 2 | CH_sly_534 | 3 | 9 | 0.000666693 |
| Triticum aestivum | Chr7D | 2 | CH_tae_842 | 3 | 3 | 0.00000907887 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| 2.4.4.2.1.1 | Cellular respiration.oxidative phosphorylation.cytochrome c.CCM cytochrome c maturation system (system I).CcmABC complex.ATP-binding component CcmA | 12 |
| 2.4.4.2.2 | Cellular respiration.oxidative phosphorylation.cytochrome c.CCM cytochrome c maturation system (system I).heme chaperone (CcmE) | 4 |
| 2.4.4.2.3.2 | Cellular respiration.oxidative phosphorylation.cytochrome c.CCM cytochrome c maturation system (system I).apocytochrome-heme assembly complex.component CcmFn | 8 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |