Functional clusters

Information

  • Type MapMan
  • Description Cellular respiration.oxidative phosphorylation.cytochrome c.CCM cytochrome c maturation system (system I).CcmABC complex.ATP-binding component CcmA

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Magnolia biondii Chr02 1 CH_mbi_400 2 3 0.000145695
Miscanthus sinensis Chr12 1 CH_msi_411 2 4 0.000193187
Sorghum bicolor Chr06 1 CH_sbi_319 2 3 0.000176
Sequoiadendron giganteum chr2 1 CH_sgi_763 2 2 0.0000487151
Saccharum spontaneum Chr5A 1 CH_ssp_879 2 2 0.000238589
Zea mays B73 2 1 CH_zma_30 5 27 0.0000000000248158
Magnolia biondii Chr02 2 CH_mbi_400 2 3 0.000145695
Miscanthus sinensis Chr12 2 CH_msi_411 2 4 0.000193187
Sorghum bicolor Chr06 2 CH_sbi_319 2 3 0.000176
Sequoiadendron giganteum chr2 2 CH_sgi_763 2 2 0.0000487151
Saccharum spontaneum Chr5A 2 CH_ssp_879 2 2 0.000238589
Zea mays B73 2 2 CH_zma_30 5 27 0.0000000000248158

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001