Functional clusters

Information

  • Type MapMan
  • Description Cellular respiration.glycolysis.methylglyoxal degradation.lactoyl-glutathione lyase (GLX1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aegilops tauschii 5D 1 CH_ata_333 2 2 0.000738625
Calamus simplicifolius scaffold888 1 CH_calsi_92 3 3 0.000000567866
Chara braunii BFEA01000135 1 CH_cbr_123 2 4 0.00043153
Ceratophyllum demersum 3 1 CH_cde_280 2 2 0.000789796
Marchantia polymorpha scaffold_33 1 CH_mpo_131 2 3 0.000993889
Secale cereale GWHASIY00000005 1 CH_sce_414 3 8 0.0000208804
Sequoiadendron giganteum chr9 1 CH_sgi_1126 2 2 0.000146145
Setaria italica scaffold_6 1 CH_sit_445 2 2 0.000580434
Saccharum spontaneum Chr6B 1 CH_ssp_188 4 9 0.0000000454182
Saccharum spontaneum Chr7A 1 CH_ssp_538 3 5 0.0000151165
Setaria viridis Chr_06 1 CH_svi_451 2 2 0.000521785
Zea mays B73 5 1 CH_zma_258 2 2 0.000511313
Aegilops tauschii 5D 2 CH_ata_333 2 2 0.000738625
Calamus simplicifolius scaffold888 2 CH_calsi_92 3 3 0.000000567866
Chara braunii BFEA01000135 2 CH_cbr_123 2 4 0.00043153
Ceratophyllum demersum 3 2 CH_cde_280 2 2 0.000789796
Marchantia polymorpha scaffold_33 2 CH_mpo_131 2 3 0.000993889
Secale cereale GWHASIY00000005 2 CH_sce_414 3 8 0.0000208804
Sequoiadendron giganteum chr9 2 CH_sgi_1126 2 2 0.000146145
Setaria italica scaffold_6 2 CH_sit_445 2 2 0.000580434
Saccharum spontaneum Chr6B 2 CH_ssp_188 4 9 0.0000000454182
Saccharum spontaneum Chr7A 2 CH_ssp_538 3 5 0.0000151165
Setaria viridis Chr_06 2 CH_svi_451 2 2 0.000521785
Zea mays B73 5 2 CH_zma_258 2 2 0.000511313

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001