Functional clusters
Information
- Type MapMan
- Description Protein homeostasis.proteolysis.cysteine-type peptidase activities.C1-class protease (Papain)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Ananas comosus | LG05 | 1 | CH_aco_6 | 5 | 7 | 0.00000000149877 |
| Aegilops tauschii | 6D | 1 | CH_ata_81 | 5 | 14 | 0.0000000176875 |
| Amborella trichopoda | AmTr_v1.0_scaffold00061 | 1 | CH_atr_57 | 4 | 4 | 0.00000000357997 |
| Brachypodium distachyon | Bd4 | 1 | CH_bdi_64 | 4 | 4 | 0.0000000123483 |
| Calamus simplicifolius | scaffold62 | 1 | CH_calsi_26 | 5 | 11 | 0.00000000043461 |
| Cenchrus purpureus | GWHAORA00000003 | 1 | CH_cpu_159 | 5 | 6 | 0.000000000224317 |
| Cenchrus purpureus | GWHAORA00000008 | 1 | CH_cpu_561 | 3 | 3 | 0.000049055 |
| Cenchrus purpureus | GWHAORA00000003 | 1 | CH_cpu_562 | 3 | 3 | 0.000049055 |
| Cenchrus purpureus | GWHAORA00000008 | 1 | CH_cpu_699 | 3 | 4 | 0.000196087 |
| Cenchrus purpureus | GWHAORA00000014 | 1 | CH_cpu_703 | 4 | 20 | 0.000207046 |
| Cenchrus purpureus | GWHAORA00000011 | 1 | CH_cpu_811 | 3 | 5 | 0.000489887 |
| Dioscorea dumetorum | contig456 | 1 | CH_ddu_1 | 22 | 38 | 3.40896e-43 |
| Dioscorea dumetorum | contig588 | 1 | CH_ddu_2 | 19 | 25 | 2.68223e-40 |
| Dioscorea dumetorum | contig564 | 1 | CH_ddu_5 | 14 | 31 | 5.88522e-24 |
| Digitaria exilis | Dexi_CM05836_chr07A | 1 | CH_dex_234 | 4 | 7 | 0.000000531207 |
| Digitaria exilis | Dexi_CM05836_chr06B | 1 | CH_dex_235 | 4 | 7 | 0.000000531207 |
| Digitaria exilis | Dexi_CM05836_chr07B | 1 | CH_dex_236 | 4 | 7 | 0.000000531207 |
| Digitaria exilis | Dexi_CM05836_chr06A | 1 | CH_dex_604 | 3 | 6 | 0.000443073 |
| Eragrostis curvula | Contig4 | 1 | CH_ecu_464 | 4 | 16 | 0.0000260015 |
| Eragrostis curvula | Contig44 | 1 | CH_ecu_62 | 9 | 42 | 6.72285e-16 |
| Elaeis guineensis | EG5.1_Chr1 | 1 | CH_egu_118 | 3 | 4 | 0.0000715692 |
| Glycine max | Gm12 | 1 | CH_gma_26 | 8 | 10 | 6.22083e-18 |
| Glycine max | Gm06 | 1 | CH_gma_8 | 17 | 61 | 5.28825e-32 |
| Hordeum vulgare | chr2H | 1 | CH_hvu_245 | 4 | 15 | 0.000020079 |
| Hordeum vulgare | chr4H | 1 | CH_hvu_247 | 3 | 3 | 0.0000208419 |
| Hordeum vulgare | chr4H | 1 | CH_hvu_440 | 3 | 7 | 0.000727855 |
| Magnolia biondii | Chr07 | 1 | CH_mbi_17 | 7 | 10 | 3.94464e-18 |
| Oryza sativa Kitaake | Chr4 | 1 | CH_osak_270 | 4 | 20 | 0.0000325278 |
| Phyllostachys edulis | hic_scaffold_24 | 1 | CH_ped_188 | 4 | 8 | 0.00000143512 |
| Phyllostachys edulis | hic_scaffold_24 | 1 | CH_ped_209 | 4 | 10 | 0.00000429998 |
| Phyllostachys edulis | hic_scaffold_20 | 1 | CH_ped_64 | 6 | 15 | 0.0000000000565556 |
| Panicum hallii | Chr07 | 1 | CH_pha_137 | 4 | 8 | 0.000000246238 |
| Populus trichocarpa | Chr07 | 1 | CH_ptr_148 | 5 | 10 | 0.0000000138226 |
| Populus trichocarpa | Chr04 | 1 | CH_ptr_38 | 8 | 12 | 2.57724e-17 |
| Sorghum bicolor | Chr10 | 1 | CH_sbi_133 | 4 | 5 | 0.0000000952529 |
| Sorghum bicolor | Chr06 | 1 | CH_sbi_45 | 6 | 8 | 0.000000000000322073 |
| Setaria italica | scaffold_6 | 1 | CH_sit_66 | 5 | 5 | 0.0000000000236914 |
| Setaria italica | scaffold_8 | 1 | CH_sit_78 | 5 | 6 | 0.000000000142045 |
| Setaria italica | scaffold_7 | 1 | CH_sit_93 | 5 | 9 | 0.00000000297641 |
| Solanum lycopersicum | SL4.0ch02 | 1 | CH_sly_245 | 4 | 14 | 0.0000105969 |
| Solanum lycopersicum | SL4.0ch02 | 1 | CH_sly_252 | 3 | 3 | 0.0000151153 |
| Solanum lycopersicum | SL4.0ch12 | 1 | CH_sly_253 | 3 | 3 | 0.0000151153 |
| Saccharum spontaneum | Chr8B | 1 | CH_ssp_238 | 4 | 4 | 0.000000165813 |
| Saccharum spontaneum | Chr8A | 1 | CH_ssp_239 | 4 | 5 | 0.000000165813 |
| Setaria viridis | Chr_07 | 1 | CH_svi_105 | 5 | 10 | 0.0000000060857 |
| Setaria viridis | Chr_06 | 1 | CH_svi_61 | 5 | 5 | 0.0000000000242369 |
| Setaria viridis | Chr_08 | 1 | CH_svi_77 | 5 | 6 | 0.000000000145317 |
| Triticum aestivum | Chr4B | 1 | CH_tae_178 | 6 | 6 | 0.00000000000023018 |
| Triticum aestivum | Chr6B | 1 | CH_tae_230 | 7 | 18 | 0.00000000000799961 |
| Triticum aestivum | Chr4D | 1 | CH_tae_29 | 10 | 10 | 3.24533e-25 |
| Triticum aestivum | Chr2B | 1 | CH_tae_555 | 4 | 4 | 0.000000184239 |
| Triticum aestivum | Chr4A | 1 | CH_tae_668 | 4 | 5 | 0.000000920357 |
| Triticum aestivum | Chr6D | 1 | CH_tae_95 | 9 | 20 | 5.01299e-17 |
| Triticum dicoccoides | 4B | 1 | CH_tdi_225 | 4 | 6 | 0.000000900913 |
| Triticum dicoccoides | 6A | 1 | CH_tdi_357 | 4 | 12 | 0.0000295943 |
| Triticum dicoccoides | 2B | 1 | CH_tdi_385 | 3 | 3 | 0.0000633219 |
| Triticum dicoccoides | 6B | 1 | CH_tdi_42 | 8 | 19 | 0.00000000000000312782 |
| Triticum turgidum | chr6A | 1 | CH_ttu_188 | 5 | 11 | 0.000000016481 |
| Triticum turgidum | chr4B | 1 | CH_ttu_205 | 4 | 4 | 0.0000000416837 |
| Triticum turgidum | chr2B | 1 | CH_ttu_467 | 3 | 3 | 0.0000476318 |
| Triticum turgidum | chr6B | 1 | CH_ttu_515 | 4 | 17 | 0.0000983041 |
| Triticum turgidum | chr4A | 1 | CH_ttu_572 | 3 | 4 | 0.000190399 |
| Vanilla planifolia | CM028150.1 | 1 | CH_vpl_84 | 3 | 3 | 0.0000037262 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00089.1 | 1 | CH_zjn_72 | 3 | 4 | 0.00000795555 |
| Zea mays B73 | 9 | 1 | CH_zma_166 | 3 | 4 | 0.000063654 |
| Zostera marina | scaffold_262 | 1 | CH_zosmarina_184 | 3 | 7 | 0.000398489 |
| Zostera marina | Chr01 | 1 | CH_zosmarina_61 | 4 | 8 | 0.000000577219 |
| Ananas comosus | LG05 | 2 | CH_aco_6 | 5 | 7 | 0.00000000149877 |
| Aegilops tauschii | 6D | 2 | CH_ata_81 | 5 | 14 | 0.0000000176875 |
| Amborella trichopoda | AmTr_v1.0_scaffold00061 | 2 | CH_atr_57 | 4 | 4 | 0.00000000357997 |
| Brachypodium distachyon | Bd4 | 2 | CH_bdi_64 | 4 | 4 | 0.0000000123483 |
| Calamus simplicifolius | scaffold62 | 2 | CH_calsi_26 | 5 | 11 | 0.00000000043461 |
| Cenchrus purpureus | GWHAORA00000003 | 2 | CH_cpu_159 | 5 | 6 | 0.000000000224317 |
| Cenchrus purpureus | GWHAORA00000008 | 2 | CH_cpu_561 | 3 | 3 | 0.000049055 |
| Cenchrus purpureus | GWHAORA00000003 | 2 | CH_cpu_562 | 3 | 3 | 0.000049055 |
| Cenchrus purpureus | GWHAORA00000008 | 2 | CH_cpu_699 | 3 | 4 | 0.000196087 |
| Cenchrus purpureus | GWHAORA00000014 | 2 | CH_cpu_703 | 4 | 20 | 0.000207046 |
| Cenchrus purpureus | GWHAORA00000011 | 2 | CH_cpu_811 | 3 | 5 | 0.000489887 |
| Dioscorea dumetorum | contig456 | 2 | CH_ddu_1 | 22 | 38 | 3.40896e-43 |
| Dioscorea dumetorum | contig588 | 2 | CH_ddu_2 | 19 | 25 | 2.68223e-40 |
| Dioscorea dumetorum | contig564 | 2 | CH_ddu_5 | 14 | 31 | 5.88522e-24 |
| Digitaria exilis | Dexi_CM05836_chr07A | 2 | CH_dex_234 | 4 | 7 | 0.000000531207 |
| Digitaria exilis | Dexi_CM05836_chr06B | 2 | CH_dex_235 | 4 | 7 | 0.000000531207 |
| Digitaria exilis | Dexi_CM05836_chr07B | 2 | CH_dex_236 | 4 | 7 | 0.000000531207 |
| Digitaria exilis | Dexi_CM05836_chr06A | 2 | CH_dex_604 | 3 | 6 | 0.000443073 |
| Eragrostis curvula | Contig4 | 2 | CH_ecu_464 | 4 | 16 | 0.0000260015 |
| Eragrostis curvula | Contig44 | 2 | CH_ecu_62 | 9 | 42 | 6.72285e-16 |
| Elaeis guineensis | EG5.1_Chr1 | 2 | CH_egu_118 | 3 | 4 | 0.0000715692 |
| Glycine max | Gm12 | 2 | CH_gma_26 | 8 | 10 | 6.22083e-18 |
| Glycine max | Gm06 | 2 | CH_gma_8 | 17 | 61 | 5.28825e-32 |
| Hordeum vulgare | chr2H | 2 | CH_hvu_245 | 4 | 15 | 0.000020079 |
| Hordeum vulgare | chr4H | 2 | CH_hvu_247 | 3 | 3 | 0.0000208419 |
| Hordeum vulgare | chr4H | 2 | CH_hvu_440 | 3 | 7 | 0.000727855 |
| Magnolia biondii | Chr07 | 2 | CH_mbi_17 | 7 | 10 | 3.94464e-18 |
| Oryza sativa Kitaake | Chr4 | 2 | CH_osak_270 | 4 | 20 | 0.0000325278 |
| Phyllostachys edulis | hic_scaffold_24 | 2 | CH_ped_188 | 4 | 8 | 0.00000143512 |
| Phyllostachys edulis | hic_scaffold_24 | 2 | CH_ped_209 | 4 | 10 | 0.00000429998 |
| Phyllostachys edulis | hic_scaffold_20 | 2 | CH_ped_64 | 6 | 15 | 0.0000000000565556 |
| Panicum hallii | Chr07 | 2 | CH_pha_137 | 4 | 8 | 0.000000246238 |
| Populus trichocarpa | Chr07 | 2 | CH_ptr_148 | 5 | 10 | 0.0000000138226 |
| Populus trichocarpa | Chr04 | 2 | CH_ptr_38 | 8 | 12 | 2.57724e-17 |
| Sorghum bicolor | Chr10 | 2 | CH_sbi_133 | 4 | 5 | 0.0000000952529 |
| Sorghum bicolor | Chr06 | 2 | CH_sbi_45 | 6 | 8 | 0.000000000000322073 |
| Setaria italica | scaffold_6 | 2 | CH_sit_66 | 5 | 5 | 0.0000000000236914 |
| Setaria italica | scaffold_8 | 2 | CH_sit_78 | 5 | 6 | 0.000000000142045 |
| Setaria italica | scaffold_7 | 2 | CH_sit_93 | 5 | 9 | 0.00000000297641 |
| Solanum lycopersicum | SL4.0ch02 | 2 | CH_sly_245 | 4 | 14 | 0.0000105969 |
| Solanum lycopersicum | SL4.0ch02 | 2 | CH_sly_252 | 3 | 3 | 0.0000151153 |
| Solanum lycopersicum | SL4.0ch12 | 2 | CH_sly_253 | 3 | 3 | 0.0000151153 |
| Saccharum spontaneum | Chr8B | 2 | CH_ssp_238 | 4 | 4 | 0.000000165813 |
| Saccharum spontaneum | Chr8A | 2 | CH_ssp_239 | 4 | 5 | 0.000000165813 |
| Setaria viridis | Chr_07 | 2 | CH_svi_105 | 5 | 10 | 0.0000000060857 |
| Setaria viridis | Chr_06 | 2 | CH_svi_61 | 5 | 5 | 0.0000000000242369 |
| Setaria viridis | Chr_08 | 2 | CH_svi_77 | 5 | 6 | 0.000000000145317 |
| Triticum aestivum | Chr4B | 2 | CH_tae_178 | 6 | 6 | 0.00000000000023018 |
| Triticum aestivum | Chr6B | 2 | CH_tae_230 | 7 | 18 | 0.00000000000799961 |
| Triticum aestivum | Chr4D | 2 | CH_tae_29 | 10 | 10 | 3.24533e-25 |
| Triticum aestivum | Chr2B | 2 | CH_tae_555 | 4 | 4 | 0.000000184239 |
| Triticum aestivum | Chr4A | 2 | CH_tae_668 | 4 | 5 | 0.000000920357 |
| Triticum aestivum | Chr6D | 2 | CH_tae_95 | 9 | 20 | 5.01299e-17 |
| Triticum dicoccoides | 4B | 2 | CH_tdi_225 | 4 | 6 | 0.000000900913 |
| Triticum dicoccoides | 6A | 2 | CH_tdi_357 | 4 | 12 | 0.0000295943 |
| Triticum dicoccoides | 2B | 2 | CH_tdi_385 | 3 | 3 | 0.0000633219 |
| Triticum dicoccoides | 6B | 2 | CH_tdi_42 | 8 | 19 | 0.00000000000000312782 |
| Triticum turgidum | chr6A | 2 | CH_ttu_188 | 5 | 11 | 0.000000016481 |
| Triticum turgidum | chr4B | 2 | CH_ttu_205 | 4 | 4 | 0.0000000416837 |
| Triticum turgidum | chr2B | 2 | CH_ttu_467 | 3 | 3 | 0.0000476318 |
| Triticum turgidum | chr6B | 2 | CH_ttu_515 | 4 | 17 | 0.0000983041 |
| Triticum turgidum | chr4A | 2 | CH_ttu_572 | 3 | 4 | 0.000190399 |
| Vanilla planifolia | CM028150.1 | 2 | CH_vpl_84 | 3 | 3 | 0.0000037262 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00089.1 | 2 | CH_zjn_72 | 3 | 4 | 0.00000795555 |
| Zea mays B73 | 9 | 2 | CH_zma_166 | 3 | 4 | 0.000063654 |
| Zostera marina | scaffold_262 | 2 | CH_zosmarina_184 | 3 | 7 | 0.000398489 |
| Zostera marina | Chr01 | 2 | CH_zosmarina_61 | 4 | 8 | 0.000000577219 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |