Functional clusters
Information
- Type MapMan
- Description Protein modification.phosphorylation.STE protein kinase superfamily.protein kinase (MAP3K-MEKK)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr2 | 1 | CH_asa_29 | 8 | 33 | 2.50135e-17 |
| Aegilops tauschii | 1D | 1 | CH_ata_23 | 6 | 9 | 0.000000000000040792 |
| Aegilops tauschii | 3D | 1 | CH_ata_65 | 4 | 4 | 0.00000000262039 |
| Arabidopsis thaliana | Chr4 | 1 | CH_ath_435 | 3 | 17 | 0.000951784 |
| Eragrostis curvula | Contig785 | 1 | CH_ecu_106 | 5 | 5 | 0.000000000000570397 |
| Hordeum vulgare | chr1H | 1 | CH_hvu_182 | 4 | 14 | 0.000000969863 |
| Hordeum vulgare | chr3H | 1 | CH_hvu_253 | 3 | 5 | 0.000028149 |
| Lolium perenne | Lp_chr3_0 | 1 | CH_lpe_19 | 8 | 26 | 2.40641e-16 |
| Lolium perenne | Lp_chr7_0.1 | 1 | CH_lpe_252 | 3 | 5 | 0.0000844895 |
| Lolium perenne | Lp_chr1_0 | 1 | CH_lpe_35 | 6 | 14 | 0.00000000000255991 |
| Oryza alta | GWHAZTO00000013 | 1 | CH_oal_163 | 4 | 7 | 0.0000000869347 |
| Oryza alta | GWHAZTO00000001 | 1 | CH_oal_333 | 3 | 4 | 0.0000259652 |
| Oryza sativa ssp. indica | Chr1 | 1 | CH_osaindica_195 | 3 | 4 | 0.0000182489 |
| Oryza sativa ssp. japonica | chr01 | 1 | CH_osa_71 | 4 | 5 | 0.000000010702 |
| Phyllostachys edulis | hic_scaffold_16 | 1 | CH_ped_256 | 3 | 3 | 0.0000210087 |
| Secale cereale | GWHASIY00000003 | 1 | CH_sce_26 | 7 | 8 | 9.57011e-19 |
| Sequoiadendron giganteum | chr7 | 1 | CH_sgi_120 | 6 | 6 | 5.70532e-18 |
| Setaria italica | scaffold_5 | 1 | CH_sit_233 | 3 | 3 | 0.00000576121 |
| Solanum lycopersicum | SL4.0ch02 | 1 | CH_sly_250 | 3 | 3 | 0.0000118856 |
| Solanum lycopersicum | SL4.0ch07 | 1 | CH_sly_53 | 6 | 8 | 0.0000000000000776634 |
| Setaria viridis | Chr_05 | 1 | CH_svi_108 | 4 | 5 | 0.0000000103213 |
| Triticum aestivum | Chr1B | 1 | CH_tae_119 | 6 | 6 | 0.00000000000000187054 |
| Triticum aestivum | Chr1D | 1 | CH_tae_245 | 5 | 6 | 0.0000000000230649 |
| Triticum aestivum | Chr3A | 1 | CH_tae_634 | 4 | 8 | 0.000000542151 |
| Triticum aestivum | Chr1A | 1 | CH_tae_884 | 3 | 3 | 0.0000153589 |
| Triticum aestivum | Chr3D | 1 | CH_tae_885 | 3 | 3 | 0.0000153589 |
| Triticum dicoccoides | 1A | 1 | CH_tdi_158 | 4 | 5 | 0.000000032261 |
| Triticum dicoccoides | 3A | 1 | CH_tdi_259 | 4 | 11 | 0.00000212373 |
| Triticum dicoccoides | 1B | 1 | CH_tdi_47 | 6 | 7 | 0.0000000000000118416 |
| Triticum turgidum | chr1B | 1 | CH_ttu_176 | 4 | 5 | 0.00000000937327 |
| Zea mays B73 | 3 | 1 | CH_zma_134 | 3 | 4 | 0.0000241483 |
| Allium sativum | chr2 | 2 | CH_asa_29 | 8 | 33 | 2.50135e-17 |
| Aegilops tauschii | 1D | 2 | CH_ata_23 | 6 | 9 | 0.000000000000040792 |
| Aegilops tauschii | 3D | 2 | CH_ata_65 | 4 | 4 | 0.00000000262039 |
| Arabidopsis thaliana | Chr4 | 2 | CH_ath_435 | 3 | 17 | 0.000951784 |
| Eragrostis curvula | Contig785 | 2 | CH_ecu_106 | 5 | 5 | 0.000000000000570397 |
| Hordeum vulgare | chr1H | 2 | CH_hvu_182 | 4 | 14 | 0.000000969863 |
| Hordeum vulgare | chr3H | 2 | CH_hvu_253 | 3 | 5 | 0.000028149 |
| Lolium perenne | Lp_chr3_0 | 2 | CH_lpe_19 | 8 | 26 | 2.40641e-16 |
| Lolium perenne | Lp_chr7_0.1 | 2 | CH_lpe_252 | 3 | 5 | 0.0000844895 |
| Lolium perenne | Lp_chr1_0 | 2 | CH_lpe_35 | 6 | 14 | 0.00000000000255991 |
| Oryza alta | GWHAZTO00000013 | 2 | CH_oal_163 | 4 | 7 | 0.0000000869347 |
| Oryza alta | GWHAZTO00000001 | 2 | CH_oal_333 | 3 | 4 | 0.0000259652 |
| Oryza sativa ssp. indica | Chr1 | 2 | CH_osaindica_195 | 3 | 4 | 0.0000182489 |
| Oryza sativa ssp. japonica | chr01 | 2 | CH_osa_71 | 4 | 5 | 0.000000010702 |
| Phyllostachys edulis | hic_scaffold_16 | 2 | CH_ped_256 | 3 | 3 | 0.0000210087 |
| Secale cereale | GWHASIY00000003 | 2 | CH_sce_26 | 7 | 8 | 9.57011e-19 |
| Sequoiadendron giganteum | chr7 | 2 | CH_sgi_120 | 6 | 6 | 5.70532e-18 |
| Setaria italica | scaffold_5 | 2 | CH_sit_233 | 3 | 3 | 0.00000576121 |
| Solanum lycopersicum | SL4.0ch02 | 2 | CH_sly_250 | 3 | 3 | 0.0000118856 |
| Solanum lycopersicum | SL4.0ch07 | 2 | CH_sly_53 | 6 | 8 | 0.0000000000000776634 |
| Setaria viridis | Chr_05 | 2 | CH_svi_108 | 4 | 5 | 0.0000000103213 |
| Triticum aestivum | Chr1B | 2 | CH_tae_119 | 6 | 6 | 0.00000000000000187054 |
| Triticum aestivum | Chr1D | 2 | CH_tae_245 | 5 | 6 | 0.0000000000230649 |
| Triticum aestivum | Chr3A | 2 | CH_tae_634 | 4 | 8 | 0.000000542151 |
| Triticum aestivum | Chr1A | 2 | CH_tae_884 | 3 | 3 | 0.0000153589 |
| Triticum aestivum | Chr3D | 2 | CH_tae_885 | 3 | 3 | 0.0000153589 |
| Triticum dicoccoides | 1A | 2 | CH_tdi_158 | 4 | 5 | 0.000000032261 |
| Triticum dicoccoides | 3A | 2 | CH_tdi_259 | 4 | 11 | 0.00000212373 |
| Triticum dicoccoides | 1B | 2 | CH_tdi_47 | 6 | 7 | 0.0000000000000118416 |
| Triticum turgidum | chr1B | 2 | CH_ttu_176 | 4 | 5 | 0.00000000937327 |
| Zea mays B73 | 3 | 2 | CH_zma_134 | 3 | 4 | 0.0000241483 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |