Functional clusters

Information

  • Type MapMan
  • Description Protein modification.phosphorylation.TKL protein kinase superfamily.protein kinase (LRR-XV)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cenchrus purpureus GWHAORA00000009 1 CH_cpu_454 3 4 0.0000055552
Eragrostis curvula 4 1 CH_ecu_643 2 2 0.000232635
Oryza alta GWHAZTO00000014 1 CH_oal_290 4 49 0.00000706855
Oryza sativa ssp. indica Chr2 1 CH_osaindica_84 5 47 0.0000000205376
Phyllostachys edulis hic_scaffold_17 1 CH_ped_250 3 6 0.0000181196
Panicum hallii Chr04 1 CH_pha_264 3 8 0.0000623361
Populus trichocarpa Chr18 1 CH_ptr_249 3 5 0.00000420826
Secale cereale GWHASIY00000005 1 CH_sce_553 3 9 0.000118679
Setaria italica scaffold_5 1 CH_sit_83 4 4 0.000000000419491
Saccharum spontaneum Chr1A 1 CH_ssp_739 3 7 0.000121214
Setaria viridis Chr_05 1 CH_svi_180 3 3 0.000000898478
Zostera marina Chr05 1 CH_zosmarina_109 3 16 0.0000781974
Cenchrus purpureus GWHAORA00000009 2 CH_cpu_454 3 4 0.0000055552
Eragrostis curvula 4 2 CH_ecu_643 2 2 0.000232635
Oryza alta GWHAZTO00000014 2 CH_oal_290 4 49 0.00000706855
Oryza sativa ssp. indica Chr2 2 CH_osaindica_84 5 47 0.0000000205376
Phyllostachys edulis hic_scaffold_17 2 CH_ped_250 3 6 0.0000181196
Panicum hallii Chr04 2 CH_pha_264 3 8 0.0000623361
Populus trichocarpa Chr18 2 CH_ptr_249 3 5 0.00000420826
Secale cereale GWHASIY00000005 2 CH_sce_553 3 9 0.000118679
Setaria italica scaffold_5 2 CH_sit_83 4 4 0.000000000419491
Saccharum spontaneum Chr1A 2 CH_ssp_739 3 7 0.000121214
Setaria viridis Chr_05 2 CH_svi_180 3 3 0.000000898478
Zostera marina Chr05 2 CH_zosmarina_109 3 16 0.0000781974

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001