Functional clusters

Information

  • Type MapMan
  • Description Protein modification.protein folding.protein folding catalyst (Cyclophilin)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr4 1 CH_asa_309 3 3 0.00000738022
Allium sativum chr8 1 CH_asa_817 3 9 0.000618517
Amborella trichopoda AmTr_v1.0_scaffold00041 1 CH_atr_74 4 5 0.000000036419
Cenchrus purpureus GWHAORA00000006 1 CH_cpu_515 3 3 0.0000217608
Chlamydomonas reinhardtii chromosome_12 1 CH_cre_20 4 9 0.00000588163
Dioscorea dumetorum contig691 1 CH_ddu_279 3 7 0.000442849
Digitaria exilis Dexi_CM05836_chr04B 1 CH_dex_356 3 3 0.0000192335
Miscanthus sinensis Chr19 1 CH_msi_288 3 3 0.0000191924
Miscanthus sinensis Chr18 1 CH_msi_289 3 3 0.0000191924
Sorghum bicolor Chr10 1 CH_sbi_109 4 4 0.00000000766406
Setaria italica scaffold_4 1 CH_sit_238 3 3 0.00000895009
Allium sativum chr4 2 CH_asa_309 3 3 0.00000738022
Allium sativum chr8 2 CH_asa_817 3 9 0.000618517
Amborella trichopoda AmTr_v1.0_scaffold00041 2 CH_atr_74 4 5 0.000000036419
Cenchrus purpureus GWHAORA00000006 2 CH_cpu_515 3 3 0.0000217608
Chlamydomonas reinhardtii chromosome_12 2 CH_cre_20 4 9 0.00000588163
Dioscorea dumetorum contig691 2 CH_ddu_279 3 7 0.000442849
Digitaria exilis Dexi_CM05836_chr04B 2 CH_dex_356 3 3 0.0000192335
Miscanthus sinensis Chr19 2 CH_msi_288 3 3 0.0000191924
Miscanthus sinensis Chr18 2 CH_msi_289 3 3 0.0000191924
Sorghum bicolor Chr10 2 CH_sbi_109 4 4 0.00000000766406
Setaria italica scaffold_4 2 CH_sit_238 3 3 0.00000895009

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001