Functional clusters

Information

  • Type MapMan
  • Description Protein modification.glycosylation.N-linked glycosylation.paucimannosidic N-glycan formation.beta-N-acetylhexosaminidase (HEXO)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Asparagus officinalis AsparagusV1_03 1 CH_aof_161 2 2 0.000453549
Amborella trichopoda AmTr_v1.0_scaffold00068 1 CH_atr_114 3 5 0.000000946474
Chara braunii BFEA01000003 1 CH_cbr_63 2 2 0.0000719269
Cenchrus purpureus GWHAORA00000009 1 CH_cpu_527 3 6 0.0000277648
Musa acuminata chr06 1 CH_mac_30 4 8 0.000000000577672
Magnolia biondii Chr01 1 CH_mbi_188 3 5 0.000000353765
Sequoiadendron giganteum chr7 1 CH_sgi_523 3 3 0.000000124594
Setaria italica scaffold_3 1 CH_sit_460 2 2 0.00087065
Selaginella moellendorffii scaffold_55 1 CH_smo_49 4 24 0.00000325481
Asparagus officinalis AsparagusV1_03 2 CH_aof_161 2 2 0.000453549
Amborella trichopoda AmTr_v1.0_scaffold00068 2 CH_atr_114 3 5 0.000000946474
Chara braunii BFEA01000003 2 CH_cbr_63 2 2 0.0000719269
Cenchrus purpureus GWHAORA00000009 2 CH_cpu_527 3 6 0.0000277648
Musa acuminata chr06 2 CH_mac_30 4 8 0.000000000577672
Magnolia biondii Chr01 2 CH_mbi_188 3 5 0.000000353765
Sequoiadendron giganteum chr7 2 CH_sgi_523 3 3 0.000000124594
Setaria italica scaffold_3 2 CH_sit_460 2 2 0.00087065
Selaginella moellendorffii scaffold_55 2 CH_smo_49 4 24 0.00000325481

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001