Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.organelle machinery.plastidial ribosome.plastidial ribosome-associated proteins.ribosome biogenesis factor (RsgA)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr7_1 1 CH_asa_473 2 3 0.000116259
Arabidopsis thaliana Chr1 1 CH_ath_300 2 4 0.00017189
Cenchrus purpureus GWHAORA00000014 1 CH_cpu_535 2 2 0.0000309138
Setaria italica scaffold_7 1 CH_sit_280 2 2 0.0000580434
Saccharum spontaneum Chr5D 1 CH_ssp_1282 2 4 0.000858874
Setaria viridis Chr_07 1 CH_svi_330 2 3 0.000156531
Allium sativum chr7_1 2 CH_asa_473 2 3 0.000116259
Arabidopsis thaliana Chr1 2 CH_ath_300 2 4 0.00017189
Cenchrus purpureus GWHAORA00000014 2 CH_cpu_535 2 2 0.0000309138
Setaria italica scaffold_7 2 CH_sit_280 2 2 0.0000580434
Saccharum spontaneum Chr5D 2 CH_ssp_1282 2 4 0.000858874
Setaria viridis Chr_07 2 CH_svi_330 2 3 0.000156531

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001