Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS13 or psRPS13

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Marchantia polymorpha scaffold_55 1 CH_mpo_99 2 2 0.000331327
Physcomitrium patens Chr15 1 CH_ppa_265 2 3 0.000551426
Populus trichocarpa Chr02 1 CH_ptr_366 2 2 0.0001734
Setaria italica scaffold_9 1 CH_sit_279 2 2 0.0000580434
Setaria viridis Chr_09 1 CH_svi_265 2 2 0.0000521785
Marchantia polymorpha scaffold_55 2 CH_mpo_99 2 2 0.000331327
Physcomitrium patens Chr15 2 CH_ppa_265 2 3 0.000551426
Populus trichocarpa Chr02 2 CH_ptr_366 2 2 0.0001734
Setaria italica scaffold_9 2 CH_sit_279 2 2 0.0000580434
Setaria viridis Chr_09 2 CH_svi_265 2 2 0.0000521785

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001