Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.translation elongation.eEF1 aminoacyl-tRNA binding factor activity.eEF1B eEF1A-GDP-recycling complex.component eEF1B-gamma

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Asparagus officinalis AsparagusV1_07 1 CH_aof_195 2 2 0.000755915
Cenchrus purpureus GWHAORA00000005 1 CH_cpu_324 4 24 0.000000310168
Oryza sativa Kitaake Chr2 1 CH_osak_363 2 2 0.000168857
Oryza sativa ssp. japonica chr02 1 CH_osa_271 2 2 0.000158437
Panicum hallii Chr04 1 CH_pha_381 2 3 0.000522972
Setaria italica scaffold_4 1 CH_sit_350 2 2 0.00017413
Solanum lycopersicum SL4.0ch11 1 CH_sly_408 2 2 0.000176082
Setaria viridis Chr_04 1 CH_svi_351 2 2 0.000156535
Triticum turgidum chr6B 1 CH_ttu_548 2 2 0.000187521
Vanilla planifolia CM028154.1 1 CH_vpl_259 2 2 0.000221664
Zostera marina Chr01 1 CH_zosmarina_84 3 16 0.00000782711
Asparagus officinalis AsparagusV1_07 2 CH_aof_195 2 2 0.000755915
Cenchrus purpureus GWHAORA00000005 2 CH_cpu_324 4 24 0.000000310168
Oryza sativa Kitaake Chr2 2 CH_osak_363 2 2 0.000168857
Oryza sativa ssp. japonica chr02 2 CH_osa_271 2 2 0.000158437
Panicum hallii Chr04 2 CH_pha_381 2 3 0.000522972
Setaria italica scaffold_4 2 CH_sit_350 2 2 0.00017413
Solanum lycopersicum SL4.0ch11 2 CH_sly_408 2 2 0.000176082
Setaria viridis Chr_04 2 CH_svi_351 2 2 0.000156535
Triticum turgidum chr6B 2 CH_ttu_548 2 2 0.000187521
Vanilla planifolia CM028154.1 2 CH_vpl_259 2 2 0.000221664
Zostera marina Chr01 2 CH_zosmarina_84 3 16 0.00000782711

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001