Functional clusters

Information

  • Type MapMan
  • Description RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.mRNA deadenylation.CCR4-NOT complex.component NOT4

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr5 1 CH_asa_832 2 3 0.000697535
Ceratophyllum demersum 7 1 CH_cde_267 2 2 0.000789796
Digitaria exilis Dexi_CM05836_chr06A 1 CH_dex_562 2 2 0.000334202
Eragrostis curvula 3 1 CH_ecu_573 2 2 0.000116317
Miscanthus sinensis Chr14 1 CH_msi_341 3 32 0.0000770467
Oryza alta GWHAZTO00000011 1 CH_oal_145 3 3 0.0000000511661
Oryza alta GWHAZTO00000012 1 CH_oal_766 2 2 0.000725448
Oryza alta GWHAZTO00000024 1 CH_oal_767 2 2 0.000725448
Panicum hallii Chr06 1 CH_pha_167 3 8 0.00000113437
Setaria italica scaffold_6 1 CH_sit_343 2 2 0.00017413
Setaria viridis Chr_06 1 CH_svi_342 2 2 0.000156535
Zostera marina Chr06 1 CH_zosmarina_156 2 3 0.000289659
Allium sativum chr5 2 CH_asa_832 2 3 0.000697535
Ceratophyllum demersum 7 2 CH_cde_267 2 2 0.000789796
Digitaria exilis Dexi_CM05836_chr06A 2 CH_dex_562 2 2 0.000334202
Eragrostis curvula 3 2 CH_ecu_573 2 2 0.000116317
Miscanthus sinensis Chr14 2 CH_msi_341 3 32 0.0000770467
Oryza alta GWHAZTO00000011 2 CH_oal_145 3 3 0.0000000511661
Oryza alta GWHAZTO00000012 2 CH_oal_766 2 2 0.000725448
Oryza alta GWHAZTO00000024 2 CH_oal_767 2 2 0.000725448
Panicum hallii Chr06 2 CH_pha_167 3 8 0.00000113437
Setaria italica scaffold_6 2 CH_sit_343 2 2 0.00017413
Setaria viridis Chr_06 2 CH_svi_342 2 2 0.000156535
Zostera marina Chr06 2 CH_zosmarina_156 2 3 0.000289659

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001