Functional clusters
Information
- Type MapMan
- Description RNA biosynthesis.transcriptional regulation.transcriptional repression
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Magnolia biondii | Chr06 | 1 | CH_mbi_361 | 4 | 21 | 0.0000558646 |
| Triticum aestivum | Chr4B | 1 | CH_tae_1433 | 3 | 5 | 0.000822195 |
| Triticum dicoccoides | 4B | 1 | CH_tdi_479 | 3 | 5 | 0.000258798 |
| Triticum turgidum | chr4B | 1 | CH_ttu_639 | 3 | 5 | 0.000383911 |
| Magnolia biondii | Chr06 | 2 | CH_mbi_361 | 4 | 21 | 0.0000558646 |
| Triticum aestivum | Chr4B | 2 | CH_tae_1433 | 3 | 5 | 0.000822195 |
| Triticum dicoccoides | 4B | 2 | CH_tdi_479 | 3 | 5 | 0.000258798 |
| Triticum turgidum | chr4B | 2 | CH_ttu_639 | 3 | 5 | 0.000383911 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| 15.5.51.2 | RNA biosynthesis.transcriptional regulation.transcriptional repression.transcriptional co-repressor (ECAP) | 4 |
| 15.5.51.3 | RNA biosynthesis.transcriptional regulation.transcriptional repression.transcriptional co-repressor (AFP/NINJA) | 12 |
| 15.5.51.4 | RNA biosynthesis.transcriptional regulation.transcriptional repression.transcriptional repressor (TIE/SPL) | 4 |
| 15.5.51.5 | RNA biosynthesis.transcriptional regulation.transcriptional repression.transcriptional repressor (NF-X1) | 2 |
| 15.5.51.6.1 | RNA biosynthesis.transcriptional regulation.transcriptional repression.LEUNIG-SEUSS repressor complex.component LUG/LUH | 30 |
| 15.5.51.6.2 | RNA biosynthesis.transcriptional regulation.transcriptional repression.LEUNIG-SEUSS repressor complex.adapter component SEU/SLK | 20 |
| 15.5.51.7.1 | RNA biosynthesis.transcriptional regulation.transcriptional repression.PPD-KIX repressor complex.component PEAPOD | 2 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |