Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.transcriptional regulation.transcriptional repression.LEUNIG-SEUSS repressor complex.adapter component SEU/SLK

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aegilops tauschii 4D 1 CH_ata_298 2 2 0.000492417
Glycine max Gm16 1 CH_gma_592 2 2 0.00079707
Hordeum vulgare chr4H 1 CH_hvu_398 2 2 0.000405836
Lolium perenne Lp_chr4_0 1 CH_lpe_354 2 2 0.000321425
Oryza alta GWHAZTO00000023 1 CH_oal_805 2 3 0.000906777
Oryza sativa ssp. indica Chr11 1 CH_osaindica_282 2 2 0.000154983
Oryza sativa Kitaake Chr11 1 CH_osak_359 2 2 0.000168857
Oryza sativa ssp. japonica chr11 1 CH_osa_268 2 2 0.000158437
Physcomitrium patens Chr25 1 CH_ppa_50 3 5 0.00000315282
Solanum lycopersicum SL4.0ch06 1 CH_sly_463 2 2 0.000352164
Aegilops tauschii 4D 2 CH_ata_298 2 2 0.000492417
Glycine max Gm16 2 CH_gma_592 2 2 0.00079707
Hordeum vulgare chr4H 2 CH_hvu_398 2 2 0.000405836
Lolium perenne Lp_chr4_0 2 CH_lpe_354 2 2 0.000321425
Oryza alta GWHAZTO00000023 2 CH_oal_805 2 3 0.000906777
Oryza sativa ssp. indica Chr11 2 CH_osaindica_282 2 2 0.000154983
Oryza sativa Kitaake Chr11 2 CH_osak_359 2 2 0.000168857
Oryza sativa ssp. japonica chr11 2 CH_osa_268 2 2 0.000158437
Physcomitrium patens Chr25 2 CH_ppa_50 3 5 0.00000315282
Solanum lycopersicum SL4.0ch06 2 CH_sly_463 2 2 0.000352164

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001