Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.GATA trancription factor families.transcription factor (D-GATA)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aegilops tauschii 2D 1 CH_ata_232 2 2 0.000147725
Cenchrus purpureus GWHAORA00000005 1 CH_cpu_782 2 2 0.000463707
Cenchrus purpureus GWHAORA00000014 1 CH_cpu_783 2 2 0.000463707
Setaria italica scaffold_7 1 CH_sit_424 2 3 0.000522365
Setaria viridis Chr_07 1 CH_svi_424 2 3 0.000469586
Triticum aestivum Chr2B 1 CH_tae_1274 2 2 0.000392839
Aegilops tauschii 2D 2 CH_ata_232 2 2 0.000147725
Cenchrus purpureus GWHAORA00000005 2 CH_cpu_782 2 2 0.000463707
Cenchrus purpureus GWHAORA00000014 2 CH_cpu_783 2 2 0.000463707
Setaria italica scaffold_7 2 CH_sit_424 2 3 0.000522365
Setaria viridis Chr_07 2 CH_svi_424 2 3 0.000469586
Triticum aestivum Chr2B 2 CH_tae_1274 2 2 0.000392839

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001