Functional clusters

Information

  • Type MapMan
  • Description Cell cycle organisation.mitosis and meiosis.chromosome segregation.centromere assembly and maintenance.histone H3 variant (CENH3)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Secale cereale GWHASIY00000001 1 CH_sce_478 2 2 0.000045529
Setaria italica scaffold_3 1 CH_sit_276 2 2 0.0000580434
Setaria viridis Chr_03 1 CH_svi_262 2 2 0.0000521785
Triticum aestivum Chr1B 1 CH_tae_1051 2 2 0.00011224
Triticum dicoccoides 1B 1 CH_tdi_401 2 2 0.0000890551
Triticum turgidum chr1B 1 CH_ttu_501 2 2 0.0000937603
Secale cereale GWHASIY00000001 2 CH_sce_478 2 2 0.000045529
Setaria italica scaffold_3 2 CH_sit_276 2 2 0.0000580434
Setaria viridis Chr_03 2 CH_svi_262 2 2 0.0000521785
Triticum aestivum Chr1B 2 CH_tae_1051 2 2 0.00011224
Triticum dicoccoides 1B 2 CH_tdi_401 2 2 0.0000890551
Triticum turgidum chr1B 2 CH_ttu_501 2 2 0.0000937603

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001