Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action.strigolactone.biosynthesis.monooxygenase (MAX1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Asparagus officinalis AsparagusV1_01 1 CH_aof_88 2 2 0.0000755915
Calamus simplicifolius scaffold442 1 CH_calsi_211 2 3 0.00020139
Cenchrus purpureus GWHAORA00000009 1 CH_cpu_638 3 37 0.000111238
Digitaria exilis Dexi_CM05836_chr05A 1 CH_dex_737 2 2 0.000935766
Digitaria exilis Dexi_CM05836_chr05B 1 CH_dex_738 2 2 0.000935766
Eragrostis curvula Contig8 1 CH_ecu_351 3 6 0.00000157813
Eragrostis curvula Contig785 1 CH_ecu_385 3 7 0.00000276152
Hordeum vulgare chr4H 1 CH_hvu_403 2 2 0.000405836
Miscanthus sinensis Chr05 1 CH_msi_602 2 2 0.000676176
Oryza sativa ssp. indica Chr1 1 CH_osaindica_329 2 2 0.000309965
Oryza sativa Kitaake Chr1 1 CH_osak_177 3 4 0.000000190077
Oryza sativa ssp. japonica chr01 1 CH_osa_404 2 4 0.000950562
Phyllostachys edulis hic_scaffold_6 1 CH_ped_436 2 2 0.000407456
Panicum hallii Chr05 1 CH_pha_367 2 2 0.000348665
Sorghum bicolor Chr03 1 CH_sbi_382 2 2 0.000352009
Secale cereale GWHASIY00000007 1 CH_sce_791 2 3 0.000409746
Sequoiadendron giganteum chr5 1 CH_sgi_879 2 2 0.0000487151
Setaria italica scaffold_5 1 CH_sit_359 2 2 0.00017413
Saccharum spontaneum Chr3B 1 CH_ssp_1330 2 2 0.000858922
Setaria viridis Chr_05 1 CH_svi_429 2 3 0.000469586
Asparagus officinalis AsparagusV1_01 2 CH_aof_88 2 2 0.0000755915
Calamus simplicifolius scaffold442 2 CH_calsi_211 2 3 0.00020139
Cenchrus purpureus GWHAORA00000009 2 CH_cpu_638 3 37 0.000111238
Digitaria exilis Dexi_CM05836_chr05A 2 CH_dex_737 2 2 0.000935766
Digitaria exilis Dexi_CM05836_chr05B 2 CH_dex_738 2 2 0.000935766
Eragrostis curvula Contig8 2 CH_ecu_351 3 6 0.00000157813
Eragrostis curvula Contig785 2 CH_ecu_385 3 7 0.00000276152
Hordeum vulgare chr4H 2 CH_hvu_403 2 2 0.000405836
Miscanthus sinensis Chr05 2 CH_msi_602 2 2 0.000676176
Oryza sativa ssp. indica Chr1 2 CH_osaindica_329 2 2 0.000309965
Oryza sativa Kitaake Chr1 2 CH_osak_177 3 4 0.000000190077
Oryza sativa ssp. japonica chr01 2 CH_osa_404 2 4 0.000950562
Phyllostachys edulis hic_scaffold_6 2 CH_ped_436 2 2 0.000407456
Panicum hallii Chr05 2 CH_pha_367 2 2 0.000348665
Sorghum bicolor Chr03 2 CH_sbi_382 2 2 0.000352009
Secale cereale GWHASIY00000007 2 CH_sce_791 2 3 0.000409746
Sequoiadendron giganteum chr5 2 CH_sgi_879 2 2 0.0000487151
Setaria italica scaffold_5 2 CH_sit_359 2 2 0.00017413
Saccharum spontaneum Chr3B 2 CH_ssp_1330 2 2 0.000858922
Setaria viridis Chr_05 2 CH_svi_429 2 3 0.000469586

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001