Functional clusters
Information
- Type MapMan
- Description Phytohormone action.cytokinin.perception and signal transduction
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Hordeum vulgare | chr7H | 1 | CH_hvu_259 | 3 | 3 | 0.0000327205 |
Oropetium thomaeum | Chromosome_2 | 1 | CH_oth_172 | 3 | 4 | 0.000136561 |
Triticum aestivum | Chr7D | 1 | CH_tae_442 | 5 | 7 | 0.00000000958789 |
Triticum aestivum | Chr7A | 1 | CH_tae_600 | 4 | 4 | 0.000000346947 |
Triticum aestivum | Chr7B | 1 | CH_tae_709 | 4 | 5 | 0.00000173289 |
Triticum dicoccoides | 7A | 1 | CH_tdi_222 | 4 | 6 | 0.000000746868 |
Triticum dicoccoides | 7B | 1 | CH_tdi_472 | 3 | 4 | 0.000220137 |
Triticum turgidum | chr7B | 1 | CH_ttu_695 | 3 | 4 | 0.000620589 |
Hordeum vulgare | chr7H | 2 | CH_hvu_259 | 3 | 3 | 0.0000327205 |
Oropetium thomaeum | Chromosome_2 | 2 | CH_oth_172 | 3 | 4 | 0.000136561 |
Triticum aestivum | Chr7D | 2 | CH_tae_442 | 5 | 7 | 0.00000000958789 |
Triticum aestivum | Chr7A | 2 | CH_tae_600 | 4 | 4 | 0.000000346947 |
Triticum aestivum | Chr7B | 2 | CH_tae_709 | 4 | 5 | 0.00000173289 |
Triticum dicoccoides | 7A | 2 | CH_tdi_222 | 4 | 6 | 0.000000746868 |
Triticum dicoccoides | 7B | 2 | CH_tdi_472 | 3 | 4 | 0.000220137 |
Triticum turgidum | chr7B | 2 | CH_ttu_695 | 3 | 4 | 0.000620589 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
11.4.2.1 | Phytohormone action.cytokinin.perception and signal transduction.receptor protein (AHK) | 2 |
11.4.2.2 | Phytohormone action.cytokinin.perception and signal transduction.signal transducer (AHP) | 34 |
11.4.2.3 | Phytohormone action.cytokinin.perception and signal transduction.signalling pathway activator (CKI1) | 2 |
11.4.2.4 | Phytohormone action.cytokinin.perception and signal transduction.B-type ARR response activator | 24 |
11.4.2.5 | Phytohormone action.cytokinin.perception and signal transduction.A-type ARR response negative regulator | 12 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |