Functional clusters
Information
- Type MapMan
- Description Phytohormone action.cytokinin.perception and signal transduction.signal transducer (AHP)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aegilops tauschii | 4D | 1 | CH_ata_11 | 7 | 10 | 8.66725e-19 |
| Hordeum vulgare | chr4H | 1 | CH_hvu_2 | 11 | 14 | 1.30034e-32 |
| Lolium perenne | Lp_chr7_0.1 | 1 | CH_lpe_82 | 4 | 13 | 0.00000000498333 |
| Secale cereale | GWHASIY00000004 | 1 | CH_sce_12 | 9 | 18 | 3.09014e-23 |
| Sequoiadendron giganteum | chr2 | 1 | CH_sgi_1115 | 2 | 2 | 0.000146145 |
| Triticum aestivum | Chr4B | 1 | CH_tae_19 | 12 | 21 | 1.23539e-28 |
| Triticum aestivum | ChrUnknown | 1 | CH_tae_239 | 5 | 5 | 0.0000000000137958 |
| Triticum aestivum | Chr4A | 1 | CH_tae_27 | 11 | 20 | 1.21717e-25 |
| Triticum aestivum | Chr4D | 1 | CH_tae_7 | 13 | 15 | 2.5277e-35 |
| Triticum aestivum | Chr4A | 1 | CH_tae_882 | 4 | 13 | 0.0000152115 |
| Triticum aestivum | Chr1B | 1 | CH_tae_961 | 3 | 3 | 0.0000326474 |
| Triticum dicoccoides | 4A | 1 | CH_tdi_265 | 3 | 3 | 0.00000304019 |
| Triticum dicoccoides | 4A | 1 | CH_tdi_30 | 7 | 15 | 1.66392e-16 |
| Triticum dicoccoides | 4B | 1 | CH_tdi_84 | 5 | 8 | 0.0000000000173156 |
| Triticum turgidum | chr4B | 1 | CH_ttu_160 | 5 | 14 | 0.00000000463403 |
| Triticum turgidum | chr1B | 1 | CH_ttu_191 | 4 | 5 | 0.0000000239678 |
| Triticum turgidum | chr4A | 1 | CH_ttu_7 | 9 | 9 | 9.11473e-26 |
| Aegilops tauschii | 4D | 2 | CH_ata_11 | 7 | 10 | 8.66725e-19 |
| Hordeum vulgare | chr4H | 2 | CH_hvu_2 | 11 | 14 | 1.30034e-32 |
| Lolium perenne | Lp_chr7_0.1 | 2 | CH_lpe_82 | 4 | 13 | 0.00000000498333 |
| Secale cereale | GWHASIY00000004 | 2 | CH_sce_12 | 9 | 18 | 3.09014e-23 |
| Sequoiadendron giganteum | chr2 | 2 | CH_sgi_1115 | 2 | 2 | 0.000146145 |
| Triticum aestivum | Chr4B | 2 | CH_tae_19 | 12 | 21 | 1.23539e-28 |
| Triticum aestivum | ChrUnknown | 2 | CH_tae_239 | 5 | 5 | 0.0000000000137958 |
| Triticum aestivum | Chr4A | 2 | CH_tae_27 | 11 | 20 | 1.21717e-25 |
| Triticum aestivum | Chr4D | 2 | CH_tae_7 | 13 | 15 | 2.5277e-35 |
| Triticum aestivum | Chr4A | 2 | CH_tae_882 | 4 | 13 | 0.0000152115 |
| Triticum aestivum | Chr1B | 2 | CH_tae_961 | 3 | 3 | 0.0000326474 |
| Triticum dicoccoides | 4A | 2 | CH_tdi_265 | 3 | 3 | 0.00000304019 |
| Triticum dicoccoides | 4A | 2 | CH_tdi_30 | 7 | 15 | 1.66392e-16 |
| Triticum dicoccoides | 4B | 2 | CH_tdi_84 | 5 | 8 | 0.0000000000173156 |
| Triticum turgidum | chr4B | 2 | CH_ttu_160 | 5 | 14 | 0.00000000463403 |
| Triticum turgidum | chr1B | 2 | CH_ttu_191 | 4 | 5 | 0.0000000239678 |
| Triticum turgidum | chr4A | 2 | CH_ttu_7 | 9 | 9 | 9.11473e-26 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |