Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action.signalling peptides.CRP (cysteine-rich-peptide) category.RALF/RALFL-peptide activity.RALF-peptide receptor (CrRLK1L)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cenchrus purpureus GWHAORA00000008 1 CH_cpu_432 3 3 0.00000372715
Glycine max Gm18 1 CH_gma_28 8 15 2.70497e-17
Glycine max Gm13 1 CH_gma_57 6 11 0.00000000000428341
Oryza sativa Kitaake Chr5 1 CH_osak_168 4 8 0.000000114439
Physcomitrium patens Chr09 1 CH_ppa_35 3 4 0.00000022525
Populus trichocarpa Chr17 1 CH_ptr_59 7 15 0.0000000000000382977
Secale cereale GWHASIY00000005 1 CH_sce_400 3 4 0.0000141745
Setaria italica scaffold_3 1 CH_sit_264 3 5 0.0000343422
Cenchrus purpureus GWHAORA00000008 2 CH_cpu_432 3 3 0.00000372715
Glycine max Gm18 2 CH_gma_28 8 15 2.70497e-17
Glycine max Gm13 2 CH_gma_57 6 11 0.00000000000428341
Oryza sativa Kitaake Chr5 2 CH_osak_168 4 8 0.000000114439
Physcomitrium patens Chr09 2 CH_ppa_35 3 4 0.00000022525
Populus trichocarpa Chr17 2 CH_ptr_59 7 15 0.0000000000000382977
Secale cereale GWHASIY00000005 2 CH_sce_400 3 4 0.0000141745
Setaria italica scaffold_3 2 CH_sit_264 3 5 0.0000343422

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001