Functional clusters

Information

  • Type MapMan
  • Description Redox homeostasis.thiol-based redox regulation.thioredoxin activities.nucleoredoxin

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Calamus simplicifolius scaffold134 1 CH_calsi_282 2 2 0.000402793
Ceratophyllum demersum 5 1 CH_cde_25 4 32 0.0000000530953
Cenchrus purpureus GWHAORA00000006 1 CH_cpu_225 5 47 0.00000000828548
Chlamydomonas reinhardtii chromosome_2 1 CH_cre_19 3 8 0.00000434433
Digitaria exilis Dexi_CM05836_chr09A 1 CH_dex_207 3 3 0.000000201047
Elaeis guineensis EG5.1_Chr13 1 CH_egu_17 4 4 0.0000000000892797
Musa acuminata chr02 1 CH_mac_201 2 2 0.000568182
Magnolia biondii Chr19 1 CH_mbi_642 2 2 0.000728491
Miscanthus sinensis Chr01 1 CH_msi_601 2 2 0.000676176
Oryza alta GWHAZTO00000015 1 CH_oal_22 5 6 0.00000000000000342823
Panicum hallii Chr09 1 CH_pha_365 2 2 0.000348665
Populus trichocarpa Chr10 1 CH_ptr_15 9 9 1.2636e-28
Sorghum bicolor Chr01 1 CH_sbi_380 2 2 0.000352009
Secale cereale GWHASIY00000002 1 CH_sce_633 2 2 0.000136587
Sequoiadendron giganteum chr6 1 CH_sgi_206 5 7 0.000000000000223507
Setaria italica scaffold_9 1 CH_sit_400 2 2 0.00034826
Solanum lycopersicum SL4.0ch05 1 CH_sly_418 2 2 0.000176082
Saccharum spontaneum Chr1A 1 CH_ssp_1327 2 2 0.000858922
Saccharum spontaneum Chr1D 1 CH_ssp_212 3 3 0.0000000717263
Calamus simplicifolius scaffold134 2 CH_calsi_282 2 2 0.000402793
Ceratophyllum demersum 5 2 CH_cde_25 4 32 0.0000000530953
Cenchrus purpureus GWHAORA00000006 2 CH_cpu_225 5 47 0.00000000828548
Chlamydomonas reinhardtii chromosome_2 2 CH_cre_19 3 8 0.00000434433
Digitaria exilis Dexi_CM05836_chr09A 2 CH_dex_207 3 3 0.000000201047
Elaeis guineensis EG5.1_Chr13 2 CH_egu_17 4 4 0.0000000000892797
Musa acuminata chr02 2 CH_mac_201 2 2 0.000568182
Magnolia biondii Chr19 2 CH_mbi_642 2 2 0.000728491
Miscanthus sinensis Chr01 2 CH_msi_601 2 2 0.000676176
Oryza alta GWHAZTO00000015 2 CH_oal_22 5 6 0.00000000000000342823
Panicum hallii Chr09 2 CH_pha_365 2 2 0.000348665
Populus trichocarpa Chr10 2 CH_ptr_15 9 9 1.2636e-28
Sorghum bicolor Chr01 2 CH_sbi_380 2 2 0.000352009
Secale cereale GWHASIY00000002 2 CH_sce_633 2 2 0.000136587
Sequoiadendron giganteum chr6 2 CH_sgi_206 5 7 0.000000000000223507
Setaria italica scaffold_9 2 CH_sit_400 2 2 0.00034826
Solanum lycopersicum SL4.0ch05 2 CH_sly_418 2 2 0.000176082
Saccharum spontaneum Chr1A 2 CH_ssp_1327 2 2 0.000858922
Saccharum spontaneum Chr1D 2 CH_ssp_212 3 3 0.0000000717263

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001