Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zjn_sc00116.1.g00580.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M003669 ORTHO05M004054 8.6e-134 479.6 244 100.0
Zjn_sc00116.1.g00740.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M003669 ORTHO05M004054 2.2e-76 288.9 178 82.6
Zjn_sc00175.1.g00010.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M003669 ORTHO05M004054 4.1e-75 284.6 173 83.8
EJB05_47146 Eragrostis curvula HOM05M003669 ORTHO05M004054 1.2e-69 266.5 176 77.8
EJB05_50138 Eragrostis curvula HOM05M003669 ORTHO05M004054 1.5e-69 266.2 176 77.8
Ot_Chr6_g25668 Oropetium thomaeum HOM05M003669 ORTHO05M004054 6.5e-65 250.8 174 76.4
DexiUA01G0012960 Digitaria exilis HOM05M003669 ORTHO05M004054 1.2e-63 246.5 176 74.4
Seita.7G019900 Setaria italica HOM05M003669 ORTHO05M004054 2.0e-61 239.2 176 72.2
Sevir.5G198800 Setaria viridis HOM05M003669 ORTHO05M004054 2.0e-61 239.2 179 72.6
Sevir.7G003000 Setaria viridis HOM05M003669 ORTHO05M004054 1.7e-60 236.1 176 71.6
Sobic.006G016500 Sorghum bicolor HOM05M003669 ORTHO05M004054 2.8e-60 235.3 175 71.4
Dexi7B01G0001690 Digitaria exilis HOM05M003669 ORTHO05M004054 8.3e-60 233.8 178 71.9
Zm00007a00045884 Zea mays B104 HOM05M003669 ORTHO05M004054 7.0e-59 230.7 172 70.3
Sspon.03G0033370-2C Saccharum spontaneum HOM05M003669 ORTHO05M004054 1.2e-58 229.9 190 67.9
Zm00001eb211510 Zea mays B73 HOM05M003669 ORTHO05M004054 1.2e-58 229.9 172 69.8
Misin05G176200 Miscanthus sinensis HOM05M003669 ORTHO05M004054 2.0e-58 229.2 176 69.3
Misin12G010200 Miscanthus sinensis HOM05M003669 ORTHO05M004054 2.0e-58 229.2 176 69.9
Sspon.03G0042260-1C Saccharum spontaneum HOM05M003669 ORTHO05M004054 2.0e-58 229.2 181 70.2
Sspon.03G0033370-1B Saccharum spontaneum HOM05M003669 ORTHO05M004054 2.7e-58 228.8 177 71.2
Zjn_sc00116.1.g00610.1.am.mk Zoysia japonica ssp. nagirizaki HOM05M003669 ORTHO05M004054 8.6e-57 223.8 145 81.4
PH02Gene41706 Phyllostachys edulis HOM05M003669 ORTHO05M004054 9.5e-56 220.3 160 73.1
OsKitaake05g059800 Oryza sativa Kitaake HOM05M003669 ORTHO05M004054 2.7e-50 202.2 163 64.4
AET1Gv20889800 Aegilops tauschii HOM05M003669 ORTHO05M004054 4.5e-50 201.4 160 68.1
TraesCS1D03G0875300 Triticum aestivum HOM05M003669 ORTHO05M004054 4.5e-50 201.4 160 68.1
GWHGAZTO001430 Oryza alta HOM05M003669 ORTHO05M004054 1.0e-49 200.3 155 63.9
Horvu_MOREX_1H01G505000 Hordeum vulgare HOM05M003669 ORTHO05M004054 1.3e-49 199.9 170 63.5
GWHGASIY004766 Secale cereale HOM05M003669 ORTHO05M004054 1.3e-49 199.9 161 68.3
TraesCS1A03G0850500 Triticum aestivum HOM05M003669 ORTHO05M004054 2.3e-49 199.1 170 65.9
TraesCS1A03G0897200 Triticum aestivum HOM05M003669 ORTHO05M004054 2.9e-49 198.7 160 68.8
GWHGASIY042799 Secale cereale HOM05M003669 ORTHO05M004054 5.0e-49 198.0 161 68.3
TraesCS1B03G0980100 Triticum aestivum HOM05M003669 ORTHO05M004054 5.0e-49 198.0 161 67.1
Horvu_MOREX_1H01G532000 Hordeum vulgare HOM05M003669 ORTHO05M004054 1.9e-48 196.1 160 67.5
TraesCS1D03G0819800 Triticum aestivum HOM05M003669 ORTHO05M004054 1.9e-48 196.1 170 64.1
TRITD1Av1G199900 Triticum turgidum HOM05M003669 ORTHO05M004054 3.3e-48 195.3 145 71.0
TraesCS1B03G1054300 Triticum aestivum HOM05M003669 ORTHO05M004054 7.3e-48 194.1 161 67.1
TRITD1Bv1G190280 Triticum turgidum HOM05M003669 ORTHO05M004054 7.3e-48 194.1 161 67.7
GWHGASIY004640 Secale cereale HOM05M003669 ORTHO05M004054 9.5e-48 193.7 160 66.2
GWHGASIY004758 Secale cereale HOM05M003669 ORTHO05M004054 1.6e-47 193.0 161 66.5
Bradi1g00740 Brachypodium distachyon HOM05M003669 ORTHO05M004054 1.2e-45 186.8 174 61.5
V3.Lp_chr1_0G17254 Lolium perenne HOM05M003669 ORTHO05M004054 7.5e-45 184.1 178 59.6
Zm00001eb088630 Zea mays B73 HOM05M003669 ORTHO05M004054 7.0e-43 177.6 137 68.6
Zm00007a00010531 Zea mays B104 HOM05M003669 ORTHO05M004054 2.0e-42 176.0 130 70.0
p5.00_sc00274_p0009 Elaeis guineensis HOM05M003669 ORTHO05M004054 3.5e-42 175.3 157 58.0
AET1Gv20824500 Aegilops tauschii HOM05M003669 ORTHO05M004054 7.8e-42 174.1 152 63.2
V3.Lp_chr2_0G12618 Lolium perenne HOM05M003669 ORTHO05M004054 1.0e-41 173.7 163 58.9
CALSI_Maker00018987 Calamus simplicifolius HOM05M003669 ORTHO05M004054 1.3e-41 173.3 172 54.7
CALSI_Maker00026199 Calamus simplicifolius HOM05M003669 ORTHO05M004054 1.3e-41 173.3 154 59.7
CALSI_Maker00010394 Calamus simplicifolius HOM05M003669 ORTHO05M004054 5.0e-41 171.4 172 54.1
Aco010413 Ananas comosus HOM05M003669 ORTHO05M004054 1.6e-39 166.4 159 56.6
TRIDC1AG054350 Triticum dicoccoides HOM05M003669 ORTHO05M004054 4.7e-39 164.9 125 69.6
TRITD1Av1G206640 Triticum turgidum HOM05M003669 ORTHO05M004054 4.7e-39 164.9 125 69.6
GWHGAZTO074992 Oryza alta HOM05M003669 ORTHO05M004054 1.4e-38 163.3 133 61.7
DDU914G0242 Dioscorea dumetorum HOM05M003669 ORTHO05M004054 1.8e-38 162.9 152 56.6
Ma04_g04900 Musa acuminata HOM05M003669 ORTHO05M004054 1.8e-38 162.9 174 49.4
GWHGAZTO033089 Oryza alta HOM05M003669 ORTHO05M004054 1.8e-38 162.9 116 69.0
AET2Gv20118200 Aegilops tauschii HOM05M003669 ORTHO05M004054 2.3e-38 162.5 125 66.4
CALSI_Maker00028749 Calamus simplicifolius HOM05M003669 ORTHO05M004054 1.2e-37 160.2 142 57.7
Asa7G06831 Allium sativum HOM05M003669 ORTHO05M004054 8.3e-36 154.1 162 50.0
Asa0G04286 Allium sativum HOM05M003669 ORTHO05M004054 1.1e-35 153.7 148 52.0
Asa4G03977 Allium sativum HOM05M003669 ORTHO05M004054 1.1e-35 153.7 148 52.0
PH02Gene47789 Phyllostachys edulis HOM05M003669 ORTHO05M004054 1.4e-35 153.3 147 59.2
HPP92_005092 Vanilla planifolia HOM05M003669 ORTHO05M004054 1.4e-35 153.3 149 53.7
Zosma01g24600 Zostera marina HOM05M003669 ORTHO05M004054 1.2e-34 150.2 175 48.6
Dexi7A01G0000700 Digitaria exilis HOM05M000087 ORTHO05M000213 5.0e-33 144.8 223 44.4
AT5G60335 Arabidopsis thaliana HOM05M003669 ORTHO05M004054 1.1e-32 143.7 155 50.3
MBI04_g27072_MAGBIO Magnolia biondii HOM05M003669 ORTHO05M004054 4.0e-30 135.2 156 46.8
Potri.006G133800 Populus trichocarpa HOM05M003669 ORTHO05M004054 5.2e-30 134.8 171 46.8
Glyma.14G041000 Glycine max HOM05M003669 ORTHO05M004054 8.9e-30 134.0 177 44.6
ATR0680G185 Amborella trichopoda HOM05M003669 ORTHO05M004054 2.6e-29 132.5 147 51.7
Asa0G04288 Allium sativum HOM05M003669 ORTHO05M004054 3.4e-29 132.1 101 61.4
Glyma.02G275000 Glycine max HOM05M003669 ORTHO05M004054 3.4e-29 132.1 179 45.3
CALSI_Maker00018532 Calamus simplicifolius HOM05M003669 ORTHO05M004054 1.7e-28 129.8 97 62.9
CALSI_Maker00045820 Calamus simplicifolius HOM05M003669 ORTHO05M004054 8.3e-28 127.5 185 42.7
CDE09G0261 Ceratophyllum demersum HOM05M003669 ORTHO05M004054 1.1e-27 127.1 156 46.8
SEGI_36576 Sequoiadendron giganteum HOM05M003669 ORTHO05M004054 2.1e-26 122.9 142 47.9
CBR_g17117 Chara braunii HOM05M003669 ORTHO05M004054 7.8e-26 120.9 141 46.8
GWHGAORA018133 Cenchrus purpureus HOM05M003669 ORTHO05M004054 1.7e-25 119.8 170 51.2
Solyc06g075000.3 Solanum lycopersicum HOM05M003669 ORTHO05M004054 2.3e-25 119.4 164 40.2
TRIDC1AG050940 Triticum dicoccoides HOM05M003669 ORTHO05M004054 2.3e-25 119.4 92 68.5
CALSI_Maker00006457 Calamus simplicifolius HOM05M003669 ORTHO05M004054 5.1e-25 118.2 204 39.7
TRIDC1BG057930 Triticum dicoccoides HOM05M003669 ORTHO05M004054 6.6e-25 117.9 91 67.0
SMO356G0194 Selaginella moellendorffii HOM05M003669 ORTHO05M004054 1.1e-24 117.1 166 41.6
Spipo1G0025500 Spirodela polyrhiza HOM05M003669 ORTHO05M004054 7.3e-24 114.4 106 53.8
GWHGAORA043645 Cenchrus purpureus HOM05M004516 ORTHO05M005678 4.7e-23 111.7 74 73.0
OB03G32830 Oryza brachyantha HOM05M003669 ORTHO05M004054 6.2e-23 111.3 90 60.0
Pp3c27_1710 Physcomitrium patens HOM05M003669 ORTHO05M004054 3.1e-22 109.0 159 39.0
CALSI_Maker00019023 Calamus simplicifolius HOM05M003669 ORTHO05M004054 7.6e-21 104.4 91 60.4
Mapoly0013s0067 Marchantia polymorpha HOM05M003669 ORTHO05M004054 6.4e-20 101.3 147 41.5
TRIDC6AG033980 Triticum dicoccoides HOM05M003669 ORTHO05M004054 3.2e-19 99.0 77 64.9
AagrBONN_evm.TU.Sc2ySwM_228.5883 Anthoceros agrestis HOM05M003669 ORTHO05M004054 1.2e-18 97.1 100 49.0
CALSI_Maker00019025 Calamus simplicifolius HOM05M003669 ORTHO05M004054 1.2e-18 97.1 96 53.1
GWHGASIY042490 Secale cereale HOM05M003669 ORTHO05M004054 2.1e-18 96.3 101 56.4
Aco010412 Ananas comosus HOM05M003669 ORTHO05M004054 4.6e-18 95.1 84 63.1
CALSI_Maker00029819 Calamus simplicifolius HOM05M003669 ORTHO05M004054 1.3e-17 93.6 96 51.0
CALSI_Maker00031839 Calamus simplicifolius HOM05M003669 ORTHO05M004054 1.3e-17 93.6 96 51.0
MCO16G180 Micromonas commoda HOM05M003669 ORTHO05M004054 2.5e-16 89.4 79 55.7
PRCOL_00002156 Prasinoderma coloniale HOM05M003669 ORTHO05M004054 2.1e-15 86.3 141 39.0
Misin06G161500 Miscanthus sinensis HOM05M003669 ORTHO05M004054 6.2e-15 84.7 165 38.2
AagrBONN_evm.TU.Sc2ySwM_228.5888 Anthoceros agrestis HOM05M003669 ORTHO05M004054 1.8e-14 83.2 140 37.1
CALSI_Maker00019030 Calamus simplicifolius HOM05M003669 ORTHO05M004054 2.0e-13 79.7 89 51.7
CALSI_Maker00012035 Calamus simplicifolius HOM05M003669 ORTHO05M004054 1.7e-12 76.6 76 51.3
CALSI_Maker00018526 Calamus simplicifolius HOM05M003669 ORTHO05M004054 1.7e-12 76.6 76 53.9
CALSI_Maker00021690 Calamus simplicifolius HOM05M003669 ORTHO05M004054 1.7e-12 76.6 76 51.3
CALSI_Maker00016548 Calamus simplicifolius HOM05M003669 ORTHO05M004054 3.8e-12 75.5 76 52.6
CALSI_Maker00028105 Calamus simplicifolius HOM05M003669 ORTHO05M004054 3.8e-12 75.5 76 53.9
Cre12.g560100 Chlamydomonas reinhardtii HOM05M003669 ORTHO05M004054 1.6e-10 70.1 101 39.6
Sobic.002G096300 Sorghum bicolor HOM05M047911 ORTHO05M033698 1.3e-07 60.5 52 59.6
Zm00001eb088610 Zea mays B73 HOM05M000087 ORTHO05M000213 5.3e-06 55.1 45 57.8

Aegilops tauschii (3 genes)
Allium sativum (4 genes)
Amborella trichopoda (1 genes)
Ananas comosus (2 genes)
Anthoceros agrestis (2 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (0 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (17 genes)
Cenchrus purpureus (2 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chlamydomonas reinhardtii (1 genes)
Digitaria exilis (3 genes)
Dioscorea dumetorum (1 genes)
Elaeis guineensis (1 genes)
Eragrostis curvula (2 genes)
Glycine max (2 genes)
Hordeum vulgare (2 genes)
Lolium perenne (2 genes)
Magnolia biondii (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (1 genes)
Oryza alta (3 genes)
Oryza brachyantha (1 genes)
Oryza sativa Kitaake (1 genes)
Oryza sativa ssp. indica (0 genes)
Oryza sativa ssp. japonica (0 genes)
Panicum hallii (0 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Saccharum spontaneum (3 genes)
Secale cereale (5 genes)
Selaginella moellendorffii (1 genes)
Sequoiadendron giganteum (1 genes)
Setaria italica (1 genes)
Setaria viridis (2 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (6 genes)
Triticum dicoccoides (4 genes)
Triticum turgidum (3 genes)
Vanilla planifolia (1 genes)
Zea mays B73 (3 genes)
Zea mays B104 (2 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (4 genes)

Program Settings