Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zjn_sc00076.1.g00600.1.cf.mkhc Zoysia japonica ssp. nagirizaki HOM05M004444 ORTHO05M005146 6.5e-202 706.4 363 100.0
EJB05_22840 Eragrostis curvula HOM05M004444 ORTHO05M005146 9.5e-161 569.7 362 80.4
EJB05_22850 Eragrostis curvula HOM05M004444 ORTHO05M005146 6.1e-160 567.0 362 79.8
Ot_Chr1_g24654 Oropetium thomaeum HOM05M004444 ORTHO05M005146 7.3e-153 543.5 363 77.1
Seita.9G285600 Setaria italica HOM05M004444 ORTHO05M005146 2.0e-142 508.8 386 69.7
Sevir.9G289900 Setaria viridis HOM05M004444 ORTHO05M005146 2.0e-142 508.8 386 69.7
Sobic.005G010900 Sorghum bicolor HOM05M004444 ORTHO05M005146 5.4e-140 500.7 385 68.8
Zm00001eb026650 Zea mays B73 HOM05M004444 ORTHO05M005146 6.6e-138 493.8 385 67.5
GWHGAORA028704 Cenchrus purpureus HOM05M004444 ORTHO05M005146 3.3e-137 491.5 386 67.6
PH02Gene11246 Phyllostachys edulis HOM05M004444 ORTHO05M005146 4.4e-134 481.1 390 65.6
GWHGAZTO059885 Oryza alta HOM05M004444 ORTHO05M005146 7.1e-124 447.2 389 62.7
OsKitaake10g026400 Oryza sativa Kitaake HOM05M004444 ORTHO05M005146 1.0e-122 443.4 389 62.2
GWHGAZTO007694 Oryza alta HOM05M004444 ORTHO05M005146 1.5e-121 439.5 389 62.2
TRITD7Bv1G021260 Triticum turgidum HOM05M004444 ORTHO05M005146 3.6e-120 434.9 390 60.3
TraesCS7B03G0149400 Triticum aestivum HOM05M004444 ORTHO05M005146 8.1e-120 433.7 390 60.0
Horvu_MOREX_7H01G170600 Hordeum vulgare HOM05M004444 ORTHO05M005146 1.8e-119 432.6 390 59.7
GWHGASIY021345 Secale cereale HOM05M004444 ORTHO05M005146 1.5e-118 429.5 390 59.0
TraesCS7A03G0353400 Triticum aestivum HOM05M004444 ORTHO05M005146 1.5e-118 429.5 390 59.5
TRITD7Av1G047310 Triticum turgidum HOM05M004444 ORTHO05M005146 4.4e-118 427.9 390 59.2
OB10G12000 Oryza brachyantha HOM05M004444 ORTHO05M005146 9.9e-118 426.8 389 60.4
Bradi3g20952 Brachypodium distachyon HOM05M004444 ORTHO05M005146 3.2e-116 421.8 390 59.5
V3.Lp_chr3_0G20448 Lolium perenne HOM05M004444 ORTHO05M005146 3.5e-115 418.3 390 58.7
AET7Gv20382400 Aegilops tauschii HOM05M004444 ORTHO05M005146 1.5e-113 412.9 390 57.9
TraesCS7D03G0342300 Triticum aestivum HOM05M004444 ORTHO05M005146 1.5e-113 412.9 390 57.9
Dexi9B01G0025200 Digitaria exilis HOM05M004444 ORTHO05M005146 2.1e-83 312.8 365 51.5
Zm00007a00006502 Zea mays B104 HOM05M004444 ORTHO05M005146 3.6e-83 312.0 264 62.1
Dexi9A01G0026300 Digitaria exilis HOM05M004444 ORTHO05M005146 3.3e-81 305.4 394 48.7
Aco021098 Ananas comosus HOM05M004444 ORTHO05M005146 3.8e-69 265.4 394 40.6
Ma11_g00940 Musa acuminata HOM05M004444 ORTHO05M005146 4.4e-49 198.7 401 35.2
p5.00_sc00075_p0140 Elaeis guineensis HOM05M004444 ORTHO05M005146 1.3e-48 197.2 378 34.4
MBI05_g07505_MAGBIO Magnolia biondii HOM05M004444 ORTHO05M005146 4.8e-48 195.3 401 33.7
Sspon.05G0030600-2C Saccharum spontaneum HOM05M004444 ORTHO05M005146 5.4e-47 191.8 146 67.1
Misin01G238800 Miscanthus sinensis HOM05M004444 ORTHO05M005146 2.0e-46 189.9 140 67.1
Misin02G243000 Miscanthus sinensis HOM05M004444 ORTHO05M005146 2.7e-46 189.5 114 84.2
Potri.009G130000 Populus trichocarpa HOM05M004444 ORTHO05M005146 3.8e-45 185.7 402 34.3
CALSI_Maker00038884 Calamus simplicifolius HOM05M004444 ORTHO05M005146 1.5e-44 183.7 466 30.9
evm.TU.AsparagusV1_04.825.V1.1 Asparagus officinalis HOM05M004444 ORTHO05M005146 5.2e-42 175.3 375 34.4
ATR0810G267 Amborella trichopoda HOM05M004444 ORTHO05M005146 1.2e-38 164.1 405 31.6
AT4G38760 Arabidopsis thaliana HOM05M004444 ORTHO05M005146 2.0e-38 163.3 395 32.4
Glyma.12G024600 Glycine max HOM05M004444 ORTHO05M005146 3.8e-37 159.1 405 32.6
Asa2G05429 Allium sativum HOM05M004444 ORTHO05M005146 3.3e-36 156.0 383 32.1
Solyc11g039880.2 Solanum lycopersicum HOM05M004444 ORTHO05M005146 1.6e-30 137.1 358 29.6
Zosma01g24670 Zostera marina HOM05M004444 ORTHO05M005146 6.6e-29 131.7 397 30.5
DDU273G0207 Dioscorea dumetorum HOM05M004444 ORTHO05M005146 2.9e-24 116.3 377 28.6
Sspon.05G0030600-1B Saccharum spontaneum HOM05M004444 ORTHO05M005146 3.6e-19 99.4 68 70.6
Mapoly0001s0208 Marchantia polymorpha HOM05M004444 ORTHO05M005146 1.8e-18 97.1 362 26.2
Pp3c5_12360 Physcomitrium patens HOM05M004444 ORTHO05M005146 3.4e-17 92.8 363 25.9
AagrBONN_evm.TU.Sc2ySwM_344.4164 Anthoceros agrestis HOM05M004444 ORTHO05M005146 6.4e-16 88.6 369 23.3
OsR498G1018166100.01 Oryza sativa ssp. indica HOM05M004444 ORTHO05M005146 1.2e-14 84.3 63 63.5
Zm00007a00006504 Zea mays B104 HOM05M004444 ORTHO05M005146 2.1e-14 83.6 48 81.2
Misin01G238900 Miscanthus sinensis HOM05M004444 ORTHO05M005146 1.5e-12 77.4 48 79.2
HPP92_005007 Vanilla planifolia HOM05M004444 ORTHO05M005146 1.9e-12 77.0 280 25.7
CBR_g5647 Chara braunii HOM05M004444 ORTHO05M005146 1.4e-10 70.9 311 22.5
HPP92_005008 Vanilla planifolia HOM05M004444 ORTHO05M005146 1.5e-09 67.4 82 35.4

Aegilops tauschii (1 genes)
Allium sativum (1 genes)
Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Anthoceros agrestis (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus purpureus (1 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (1 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (2 genes)
Dioscorea dumetorum (1 genes)
Elaeis guineensis (1 genes)
Eragrostis curvula (2 genes)
Glycine max (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Magnolia biondii (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (1 genes)
Oryza alta (2 genes)
Oryza brachyantha (1 genes)
Oryza sativa Kitaake (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (0 genes)
Panicum hallii (0 genes)
Phyllostachys edulis (1 genes)
Physcomitrium patens (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (2 genes)
Secale cereale (1 genes)
Selaginella moellendorffii (0 genes)
Sequoiadendron giganteum (0 genes)
Setaria italica (1 genes)
Setaria viridis (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (0 genes)
Triticum aestivum (3 genes)
Triticum dicoccoides (0 genes)
Triticum turgidum (2 genes)
Vanilla planifolia (2 genes)
Zea mays B73 (1 genes)
Zea mays B104 (2 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

Program Settings