Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zjn_sc00014.1.g03920.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM05M002591 ORTHO05M002977 7.8e-219 762.7 374 100.0
Ot_Chr4_g07544 Oropetium thomaeum HOM05M002591 ORTHO05M002977 6.2e-200 699.9 423 82.5
Sevir.9G093600 Setaria viridis HOM05M002591 ORTHO05M002977 7.4e-193 676.4 423 79.4
Seita.9G095100 Setaria italica HOM05M002591 ORTHO05M002977 9.6e-193 676.0 423 79.4
GWHGAORA019613 Cenchrus purpureus HOM05M002591 ORTHO05M002977 1.6e-192 675.2 423 79.4
Sobic.001G092200 Sorghum bicolor HOM05M002591 ORTHO05M002977 2.8e-192 674.5 423 79.2
Zm00001eb057040 Zea mays B73 HOM05M002591 ORTHO05M002977 3.7e-192 674.1 422 79.6
Misin01G083200 Miscanthus sinensis HOM05M002591 ORTHO05M002977 1.1e-191 672.5 423 78.7
Misin02G071200 Miscanthus sinensis HOM05M002591 ORTHO05M002977 1.8e-191 671.8 423 78.5
Zm00007a00005376 Zea mays B104 HOM05M002591 ORTHO05M002977 4.1e-191 670.6 420 79.5
Pahal.9G090200 Panicum hallii HOM05M002591 ORTHO05M002977 1.2e-190 669.1 423 78.3
EJB05_04528 Eragrostis curvula HOM05M002591 ORTHO05M002977 4.6e-187 657.1 407 81.1
GWHGAORA050937 Cenchrus purpureus HOM05M002591 ORTHO05M002977 5.7e-185 650.2 394 82.2
OB03G40960 Oryza brachyantha HOM05M002591 ORTHO05M002977 9.7e-185 649.4 423 75.9
PH02Gene30896 Phyllostachys edulis HOM05M002591 ORTHO05M002977 9.7e-185 649.4 421 76.7
OsKitaake03g336201 Oryza sativa Kitaake HOM05M002591 ORTHO05M002977 1.6e-184 648.7 423 76.4
OsR498G0307041000.01 Oryza sativa ssp. indica HOM05M002591 ORTHO05M002977 1.6e-184 648.7 423 76.4
Os03g0746500 Oryza sativa ssp. japonica HOM05M002591 ORTHO05M002977 1.6e-184 648.7 423 76.4
TraesCS5B03G0973300 Triticum aestivum HOM05M002591 ORTHO05M002977 6.3e-184 646.7 423 75.4
GWHGAZTO026653 Oryza alta HOM05M002591 ORTHO05M002977 2.4e-183 644.8 424 75.7
TRITD5Bv1G198110 Triticum turgidum HOM05M002591 ORTHO05M002977 2.4e-183 644.8 423 75.2
Bradi1g08847 Brachypodium distachyon HOM05M002591 ORTHO05M002977 1.2e-182 642.5 423 74.7
TraesCS5D03G0881300 Triticum aestivum HOM05M002591 ORTHO05M002977 2.0e-182 641.7 423 74.9
GWHGASIY028222 Secale cereale HOM05M002591 ORTHO05M002977 7.7e-182 639.8 423 74.7
Horvu_MOREX_5H01G560300 Hordeum vulgare HOM05M002591 ORTHO05M002977 2.2e-181 638.3 423 74.7
TraesCS5A03G0921900 Triticum aestivum HOM05M002591 ORTHO05M002977 2.2e-181 638.3 423 74.5
TRITD5Av1G202650 Triticum turgidum HOM05M002591 ORTHO05M002977 2.2e-181 638.3 423 74.5
Aco009695 Ananas comosus HOM05M002591 ORTHO05M002977 2.0e-174 615.1 417 73.1
p5.00_sc00217_p0030 Elaeis guineensis HOM05M002591 ORTHO05M002977 1.8e-170 602.1 411 73.5
CALSI_Maker00009861 Calamus simplicifolius HOM05M002591 ORTHO05M002977 2.2e-168 595.1 428 70.6
evm.TU.AsparagusV1_03.2935.V1.1 Asparagus officinalis HOM05M002591 ORTHO05M002977 1.2e-163 579.3 418 68.9
HPP92_024843 Vanilla planifolia HOM05M002591 ORTHO05M002977 6.1e-163 577.0 419 68.3
HPP92_026615 Vanilla planifolia HOM05M002591 ORTHO05M002977 8.0e-163 576.6 419 68.7
Spipo3G0091100 Spirodela polyrhiza HOM05M002591 ORTHO05M002977 1.0e-162 576.2 379 75.5
Asa2G06495 Allium sativum HOM05M002591 ORTHO05M002977 1.7e-160 568.9 418 68.2
ATR0665G409 Amborella trichopoda HOM05M002591 ORTHO05M002977 2.0e-153 545.4 418 65.1
Glyma.01G235700 Glycine max HOM05M002591 ORTHO05M002977 7.5e-153 543.5 410 66.1
MBI11_g32998_MAGBIO Magnolia biondii HOM05M002591 ORTHO05M002977 1.6e-150 535.8 420 64.0
Potri.010G084100 Populus trichocarpa HOM05M002591 ORTHO05M002977 1.0e-149 533.1 406 65.8
Glyma.11G007500 Glycine max HOM05M002591 ORTHO05M002977 1.1e-148 529.6 388 68.0
CDE04G2869 Ceratophyllum demersum HOM05M002591 ORTHO05M002977 4.0e-146 521.2 389 65.3
AT4G14790 Arabidopsis thaliana HOM05M002591 ORTHO05M002977 1.7e-144 515.8 406 64.5
Aco023211 Ananas comosus HOM05M003172 ORTHO05M003204 1.3e-141 506.1 375 69.1
Ma07_g27290 Musa acuminata HOM05M002591 ORTHO05M002977 6.6e-141 503.8 358 70.1
GWHGAORA050955 Cenchrus purpureus HOM05M002591 ORTHO05M002977 4.9e-128 461.1 423 59.8
Sevir.6G070900 Setaria viridis HOM05M002591 ORTHO05M002977 3.0e-125 451.8 241 89.6
TRIDC5BG060290 Triticum dicoccoides HOM05M002591 ORTHO05M002977 3.9e-125 451.4 311 73.0
SMO196G0191 Selaginella moellendorffii HOM05M002591 ORTHO05M002977 1.8e-106 389.4 402 49.8
Zosma03g32970 Zostera marina HOM05M002591 ORTHO05M002977 9.9e-105 383.6 311 62.4
DDU444G0084 Dioscorea dumetorum HOM05M002591 ORTHO05M002977 9.3e-103 377.1 294 62.9
Pp3c11_24680 Physcomitrium patens HOM05M002591 ORTHO05M002977 5.6e-92 341.3 401 45.1
MCO16G401 Micromonas commoda HOM05M002591 ORTHO05M002977 4.8e-91 338.2 395 45.1
Mapoly0052s0044 Marchantia polymorpha HOM05M002591 ORTHO05M002977 2.4e-90 335.9 401 44.9
Sspon.01G0061530-1D Saccharum spontaneum HOM05M002591 ORTHO05M002977 2.6e-89 332.4 176 87.5
Glyma.19G021800 Glycine max HOM05M002591 ORTHO05M002977 5.8e-89 331.3 403 42.2
Ma10_g29780 Musa acuminata HOM05M002591 ORTHO05M002977 5.8e-89 331.3 403 41.9
Aco002875 Ananas comosus HOM05M002591 ORTHO05M002977 1.3e-88 330.1 406 41.6
Glyma.13G063500 Glycine max HOM05M002591 ORTHO05M002977 1.3e-88 330.1 409 41.1
p5.00_sc00035_p0057 Elaeis guineensis HOM05M002591 ORTHO05M002977 2.2e-88 329.3 406 41.6
Solyc11g011460.2 Solanum lycopersicum HOM05M002591 ORTHO05M002977 2.9e-88 328.9 403 41.7
AagrBONN_evm.TU.Sc2ySwM_117.4074 Anthoceros agrestis HOM05M002591 ORTHO05M002977 4.9e-88 328.2 401 43.4
V3.Lp_chr2_0G21842 Lolium perenne HOM05M002591 ORTHO05M002977 8.4e-88 327.4 403 41.9
DDU033G0014 Dioscorea dumetorum HOM05M002591 ORTHO05M002977 1.1e-87 327.0 406 41.6
DDU049G0210 Dioscorea dumetorum HOM05M002591 ORTHO05M002977 4.2e-87 325.1 406 41.4
EJB05_37700 Eragrostis curvula HOM05M002591 ORTHO05M002977 4.2e-87 325.1 403 41.9
Horvu_MOREX_2H01G480400 Hordeum vulgare HOM05M002591 ORTHO05M002977 4.2e-87 325.1 403 41.4
Misin12G105500 Miscanthus sinensis HOM05M002591 ORTHO05M002977 5.5e-87 324.7 403 41.9
EJB05_37633 Eragrostis curvula HOM05M002591 ORTHO05M002977 7.1e-87 324.3 403 41.9
Ot_Chr6_g20699 Oropetium thomaeum HOM05M002591 ORTHO05M002977 9.3e-87 323.9 403 41.7
Sspon.05G0009940-2C Saccharum spontaneum HOM05M002591 ORTHO05M002977 1.2e-86 323.6 403 41.7
Sspon.05G0009940-3D Saccharum spontaneum HOM05M002591 ORTHO05M002977 1.2e-86 323.6 403 41.7
CALSI_Maker00032471 Calamus simplicifolius HOM05M002591 ORTHO05M002977 2.1e-86 322.8 406 41.1
TRIDC2AG047430 Triticum dicoccoides HOM05M002591 ORTHO05M002977 2.1e-86 322.8 403 40.9
TRIDC2BG049940 Triticum dicoccoides HOM05M002591 ORTHO05M002977 2.1e-86 322.8 403 40.9
TRITD2Av1G198970 Triticum turgidum HOM05M002591 ORTHO05M002977 2.1e-86 322.8 403 40.9
GWHGAORA061898 Cenchrus purpureus HOM05M002591 ORTHO05M002977 2.7e-86 322.4 387 42.4
GWHGAZTO079608 Oryza alta HOM05M002591 ORTHO05M002977 2.7e-86 322.4 403 41.4
Potri.017G081900 Populus trichocarpa HOM05M002591 ORTHO05M002977 2.7e-86 322.4 394 41.6
Sobic.006G106300 Sorghum bicolor HOM05M002591 ORTHO05M002977 2.7e-86 322.4 403 41.4
TraesCS2B03G0890000 Triticum aestivum HOM05M002591 ORTHO05M002977 2.7e-86 322.4 403 40.9
TRITD2Bv1G162220 Triticum turgidum HOM05M002591 ORTHO05M002977 2.7e-86 322.4 403 40.9
MBI05_g08280_MAGBIO Magnolia biondii HOM05M002591 ORTHO05M002977 3.5e-86 322.0 403 41.2
GWHGAZTO029914 Oryza alta HOM05M002591 ORTHO05M002977 3.5e-86 322.0 403 41.4
OB04G22230 Oryza brachyantha HOM05M002591 ORTHO05M002977 3.5e-86 322.0 403 41.4
OsKitaake04g154900 Oryza sativa Kitaake HOM05M002591 ORTHO05M002977 3.5e-86 322.0 403 41.4
OsR498G0408697000.01 Oryza sativa ssp. indica HOM05M002591 ORTHO05M002977 3.5e-86 322.0 403 41.4
Os04g0459800 Oryza sativa ssp. japonica HOM05M002591 ORTHO05M002977 3.5e-86 322.0 403 41.4
GWHGASIY009165 Secale cereale HOM05M002591 ORTHO05M002977 3.5e-86 322.0 403 40.9
AET2Gv20734500 Aegilops tauschii HOM05M002591 ORTHO05M002977 4.6e-86 321.6 403 40.7
SMO356G0765 Selaginella moellendorffii HOM05M002591 ORTHO05M002977 4.6e-86 321.6 401 44.1
TraesCS2D03G0745200 Triticum aestivum HOM05M002591 ORTHO05M002977 4.6e-86 321.6 403 40.7
Zm00001eb080820 Zea mays B73 HOM05M002591 ORTHO05M002977 4.6e-86 321.6 403 41.2
MBI06_g06491_MAGBIO Magnolia biondii HOM05M002591 ORTHO05M002977 7.9e-86 320.9 403 41.2
evm.TU.AsparagusV1_03.1688.V1.1 Asparagus officinalis HOM05M002591 ORTHO05M002977 1.0e-85 320.5 294 51.4
Asa6G03815 Allium sativum HOM05M002591 ORTHO05M002977 2.3e-85 319.3 399 40.9
GWHGAORA023986 Cenchrus purpureus HOM05M002591 ORTHO05M002977 2.3e-85 319.3 403 40.9
Pahal.7G177200 Panicum hallii HOM05M002591 ORTHO05M002977 2.3e-85 319.3 403 41.2
CDE04G1324 Ceratophyllum demersum HOM05M002591 ORTHO05M002977 8.7e-85 317.4 400 40.5
AT5G39840 Arabidopsis thaliana HOM05M002591 ORTHO05M002977 1.1e-84 317.0 404 40.3
Asa1G02076 Allium sativum HOM05M002591 ORTHO05M002977 1.9e-84 316.2 399 40.4
Bradi5g12360 Brachypodium distachyon HOM05M002591 ORTHO05M002977 1.9e-84 316.2 403 40.9
CDE07G1280 Ceratophyllum demersum HOM05M002591 ORTHO05M002977 5.6e-84 314.7 394 40.6
Sspon.05G0009940-1P Saccharum spontaneum HOM05M002591 ORTHO05M002977 5.6e-84 314.7 357 44.8
Seita.7G123800 Setaria italica HOM05M002591 ORTHO05M002977 5.6e-84 314.7 403 40.7
ATR0564G515 Amborella trichopoda HOM05M002591 ORTHO05M002977 7.4e-84 314.3 409 40.1
SEGI_33056 Sequoiadendron giganteum HOM05M002591 ORTHO05M002977 7.4e-84 314.3 291 50.5
Sevir.7G132100 Setaria viridis HOM05M002591 ORTHO05M002977 7.4e-84 314.3 403 40.7
PH02Gene10054 Phyllostachys edulis HOM05M002591 ORTHO05M002977 9.6e-84 313.9 403 40.7
Spipo0G0053900 Spirodela polyrhiza HOM05M002591 ORTHO05M002977 1.6e-83 313.2 403 40.4
HPP92_004328 Vanilla planifolia HOM05M002591 ORTHO05M002977 2.8e-83 312.4 394 41.1
Zm00001eb424140 Zea mays B73 HOM05M002591 ORTHO05M002977 2.0e-81 306.2 402 41.3
Zm00001eb424180 Zea mays B73 HOM05M002591 ORTHO05M002977 2.0e-81 306.2 402 41.3
Zm00007a00023962 Zea mays B104 HOM05M002591 ORTHO05M002977 2.0e-81 306.2 402 41.3
CBR_g36977 Chara braunii HOM05M002591 ORTHO05M002977 1.0e-80 303.9 379 42.7
AagrBONN_evm.TU.Sc2ySwM_228.3584 Anthoceros agrestis HOM05M002591 ORTHO05M002977 5.5e-79 298.1 315 49.2
Zm00001eb424230 Zea mays B73 HOM05M002591 ORTHO05M002977 5.5e-79 298.1 291 50.2
PRCOL_00000719 Prasinoderma coloniale HOM05M002591 ORTHO05M002977 9.0e-74 280.8 312 48.1
AET5Gv20897000 Aegilops tauschii HOM05M002591 ORTHO05M002977 3.8e-72 275.4 219 66.2
Zm00007a00024553 Zea mays B104 HOM05M002591 ORTHO05M002977 3.8e-72 275.4 263 50.6
GWHGAZTO076546 Oryza alta HOM05M002591 ORTHO05M002977 8.5e-72 274.2 210 67.1
Zm00007a00014075 Zea mays B104 HOM05M002591 ORTHO05M002977 1.1e-68 263.8 243 51.0
Zjn_sc00058.1.g00910.1.cf.mkhc Zoysia japonica ssp. nagirizaki HOM05M002591 ORTHO05M002977 6.5e-64 248.1 348 37.9
Sspon.05G0009940-1A Saccharum spontaneum HOM05M002591 ORTHO05M002977 3.7e-51 205.7 290 37.9
Zm00007a00023967 Zea mays B104 HOM05M002591 ORTHO05M002977 3.5e-49 199.1 201 48.8
Cre06.g270900 Chlamydomonas reinhardtii HOM05M002591 ORTHO05M002977 1.0e-48 197.6 537 29.1
Dexi7B01G0009660 Digitaria exilis HOM05M002591 ORTHO05M002977 9.4e-47 191.0 181 50.3
Zm00007a00035722 Zea mays B104 HOM05M002591 ORTHO05M002977 1.2e-46 190.7 150 66.0
Zm00001eb424090 Zea mays B73 HOM05M002591 ORTHO05M002977 1.1e-42 177.6 215 43.7
SMO196G0031 Selaginella moellendorffii HOM05M015296 ORTHO05M234773 1.0e-32 144.4 309 33.3
Zm00007a00023965 Zea mays B104 HOM05M002591 ORTHO05M027150 2.1e-22 110.2 98 55.1
Zm00007a00024549 Zea mays B104 HOM05M002591 ORTHO05M027150 1.4e-21 107.5 91 54.9
Zm00007a00023959 Zea mays B104 HOM05M002591 ORTHO05M002977 6.8e-21 105.1 280 26.8
Zm00001eb424200 Zea mays B73 HOM05M002591 ORTHO05M027150 2.6e-20 103.2 89 53.9
Asa7G06616 Allium sativum HOM05M002591 ORTHO05M002977 6.4e-19 98.6 58 74.1
Zm00007a00001687 Zea mays B104 HOM05M000561 ORTHO05M000631 8.6e-16 88.2 48 79.2
Zm00007a00023960 Zea mays B104 HOM05M002591 ORTHO05M002977 3.1e-13 79.7 58 60.3
Dexi9A01G0009070 Digitaria exilis HOM05M002591 ORTHO05M002977 9.8e-12 74.7 39 79.5
PH02Gene14075 Phyllostachys edulis HOM05M002591 ORTHO05M002977 1.7e-11 73.9 40 82.5
GWHGAZTO076545 Oryza alta HOM05M002591 ORTHO05M002977 4.9e-11 72.4 37 86.5
p5.00_sc00217_p0031 Elaeis guineensis HOM05M002591 ORTHO05M002977 1.6e-09 67.4 38 76.3
SEGI_36430 Sequoiadendron giganteum HOM05M002591 ORTHO05M002977 2.3e-08 63.5 43 58.1


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