Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zjn_sc00007.1.g12070.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM05M002244 ORTHO05M002569 3.3e-78 294.3 155 100.0
Zjn_sc00017.1.g00230.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM05M002244 ORTHO05M002569 3.6e-69 264.2 152 92.1
Zm00007a00024187 Zea mays B104 HOM05M002244 ORTHO05M002569 6.8e-68 260.0 151 92.1
Sspon.02G0008520-3D Saccharum spontaneum HOM05M002244 ORTHO05M002569 2.0e-67 258.5 155 88.4
EJB05_20725 Eragrostis curvula HOM05M002244 ORTHO05M002569 7.8e-64 246.5 135 94.1
Zjn_sc00056.1.g02290.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM05M002244 ORTHO05M002569 7.8e-64 246.5 141 90.8
Misin03G259700 Miscanthus sinensis HOM05M002244 ORTHO05M002569 2.3e-63 245.0 135 94.8
Ot_Chr1_g02797 Oropetium thomaeum HOM05M002244 ORTHO05M002569 2.3e-63 245.0 134 94.8
Sobic.002G286900 Sorghum bicolor HOM05M002244 ORTHO05M002569 3.0e-63 244.6 135 94.1
GWHGAORA024521 Cenchrus purpureus HOM05M002244 ORTHO05M002569 5.1e-63 243.8 135 94.1
GWHGAORA059888 Cenchrus purpureus HOM05M002244 ORTHO05M002569 5.1e-63 243.8 135 94.1
Seita.1G238800 Setaria italica HOM05M002244 ORTHO05M002569 5.1e-63 243.8 135 94.1
Sevir.1G243800 Setaria viridis HOM05M002244 ORTHO05M002569 5.1e-63 243.8 135 94.1
TRIDC6AG035160 Triticum dicoccoides HOM05M002244 ORTHO05M002569 1.1e-62 242.7 150 84.7
Dexi7A01G0012580 Digitaria exilis HOM05M002244 ORTHO05M002569 1.5e-62 242.3 134 93.3
Dexi7B01G0013330 Digitaria exilis HOM05M002244 ORTHO05M002569 1.5e-62 242.3 134 93.3
Misin04G269700 Miscanthus sinensis HOM05M002244 ORTHO05M002569 1.5e-62 242.3 135 93.3
OsKitaake02g252200 Oryza sativa Kitaake HOM05M002244 ORTHO05M002569 1.5e-62 242.3 135 93.3
OsR498G0204339400.01 Oryza sativa ssp. indica HOM05M002244 ORTHO05M002569 1.5e-62 242.3 135 93.3
Os02g0622300 Oryza sativa ssp. japonica HOM05M002244 ORTHO05M002569 1.5e-62 242.3 135 93.3
Zm00001eb104220 Zea mays B73 HOM05M002244 ORTHO05M002569 1.5e-62 242.3 135 93.3
Zm00007a00011145 Zea mays B104 HOM05M002244 ORTHO05M002569 1.5e-62 242.3 135 93.3
OsKitaake04g196300 Oryza sativa Kitaake HOM05M002244 ORTHO05M002569 1.9e-62 241.9 135 93.3
OsR498G0408890800.01 Oryza sativa ssp. indica HOM05M002244 ORTHO05M002569 1.9e-62 241.9 135 93.3
Os04g0515300 Oryza sativa ssp. japonica HOM05M002244 ORTHO05M002569 1.9e-62 241.9 135 93.3
Sspon.02G0008520-1A Saccharum spontaneum HOM05M002244 ORTHO05M002569 1.9e-62 241.9 134 94.0
TRIDC6BG041820 Triticum dicoccoides HOM05M002244 ORTHO05M002569 2.5e-62 241.5 137 91.2
OB02G31920 Oryza brachyantha HOM05M002244 ORTHO05M002569 3.3e-62 241.1 135 92.6
Pahal.1G312100 Panicum hallii HOM05M002244 ORTHO05M002569 3.3e-62 241.1 135 92.6
Seita.7G166100 Setaria italica HOM05M002244 ORTHO05M002569 3.3e-62 241.1 134 93.3
Sevir.7G175200 Setaria viridis HOM05M002244 ORTHO05M002569 3.3e-62 241.1 134 93.3
Dexi7A01G0012570 Digitaria exilis HOM05M002244 ORTHO05M002569 4.3e-62 240.7 130 95.4
Dexi7B01G0013320 Digitaria exilis HOM05M002244 ORTHO05M002569 4.3e-62 240.7 130 95.4
GWHGAZTO080140 Oryza alta HOM05M002244 ORTHO05M002569 4.3e-62 240.7 135 93.3
Bradi1g06366 Brachypodium distachyon HOM05M002244 ORTHO05M002569 5.6e-62 240.4 135 92.6
Bradi5g15570 Brachypodium distachyon HOM05M002244 ORTHO05M002569 5.6e-62 240.4 134 93.3
GWHGAORA062322 Cenchrus purpureus HOM05M002244 ORTHO05M002569 9.6e-62 239.6 134 92.5
GWHGAZTO019564 Oryza alta HOM05M002244 ORTHO05M002569 9.6e-62 239.6 135 92.6
GWHGAZTO071238 Oryza alta HOM05M002244 ORTHO05M002569 9.6e-62 239.6 134 93.3
EJB05_38741 Eragrostis curvula HOM05M002244 ORTHO05M002569 1.2e-61 239.2 134 92.5
Misin11G142900 Miscanthus sinensis HOM05M002244 ORTHO05M002569 1.2e-61 239.2 134 91.8
Misin12G148200 Miscanthus sinensis HOM05M002244 ORTHO05M002569 1.2e-61 239.2 134 91.8
Sspon.05G0007070-2B Saccharum spontaneum HOM05M002244 ORTHO05M002569 1.2e-61 239.2 134 91.8
Sspon.05G0007070-4D Saccharum spontaneum HOM05M002244 ORTHO05M002569 1.2e-61 239.2 134 91.8
Zm00001eb426610 Zea mays B73 HOM05M002244 ORTHO05M002569 1.2e-61 239.2 134 91.8
Zm00007a00048060 Zea mays B104 HOM05M002244 ORTHO05M002569 1.2e-61 239.2 134 91.8
GWHGAORA022284 Cenchrus purpureus HOM05M002244 ORTHO05M002569 1.6e-61 238.8 153 84.3
PH02Gene26994 Phyllostachys edulis HOM05M002244 ORTHO05M002569 1.6e-61 238.8 135 92.6
Sspon.05G0007070-1A Saccharum spontaneum HOM05M002244 ORTHO05M002569 1.6e-61 238.8 134 91.0
Pahal.7G219600 Panicum hallii HOM05M002244 ORTHO05M002569 2.1e-61 238.4 134 91.8
PH02Gene45030 Phyllostachys edulis HOM05M002244 ORTHO05M002569 2.1e-61 238.4 135 92.6
GWHGASIY032203 Secale cereale HOM05M002244 ORTHO05M002569 2.8e-61 238.0 135 91.1
Sobic.006G147000 Sorghum bicolor HOM05M002244 ORTHO05M002569 2.8e-61 238.0 134 91.0
TraesCS6A03G0619400 Triticum aestivum HOM05M002244 ORTHO05M002569 2.8e-61 238.0 135 91.1
TraesCS6D03G0519400 Triticum aestivum HOM05M002244 ORTHO05M002569 2.8e-61 238.0 135 91.1
GWHGASIY009940 Secale cereale HOM05M002244 ORTHO05M002569 3.6e-61 237.7 134 91.0
TraesCS2A03G0928000 Triticum aestivum HOM05M002244 ORTHO05M002569 3.6e-61 237.7 134 91.0
TraesCS2B03G1020100 Triticum aestivum HOM05M002244 ORTHO05M002569 3.6e-61 237.7 134 91.0
TRITD2Av1G226820 Triticum turgidum HOM05M002244 ORTHO05M002569 3.6e-61 237.7 134 91.0
TRITD2Bv1G188900 Triticum turgidum HOM05M002244 ORTHO05M002569 3.6e-61 237.7 134 91.0
Horvu_MOREX_2H01G539600 Hordeum vulgare HOM05M002244 ORTHO05M002569 4.7e-61 237.3 134 90.3
Horvu_MOREX_6H01G345300 Hordeum vulgare HOM05M002244 ORTHO05M002569 4.7e-61 237.3 130 93.1
PH02Gene09534 Phyllostachys edulis HOM05M002244 ORTHO05M002569 6.2e-61 236.9 135 91.9
Ot_Chr6_gn36899 Oropetium thomaeum HOM05M002244 ORTHO05M002569 8.1e-61 236.5 133 93.2
GWHGAZTO030473 Oryza alta HOM05M002244 ORTHO05M002569 8.1e-61 236.5 134 92.5
TraesCS6B03G0753600 Triticum aestivum HOM05M002244 ORTHO05M002569 1.1e-60 236.1 132 90.9
TraesCS2D03G0867100 Triticum aestivum HOM05M002244 ORTHO05M002569 1.4e-60 235.7 134 90.3
Ma11_g15020 Musa acuminata HOM05M002244 ORTHO05M002569 5.2e-60 233.8 135 89.6
Ma08_g14980 Musa acuminata HOM05M002244 ORTHO05M002569 1.5e-59 232.3 135 88.9
V3.Lp_chr2_0G17950 Lolium perenne HOM05M002244 ORTHO05M002569 3.4e-59 231.1 134 88.1
TRIDC2BG058060 Triticum dicoccoides HOM05M002244 ORTHO05M002569 4.4e-59 230.7 131 90.8
Ma02_g01500 Musa acuminata HOM05M002244 ORTHO05M002569 5.8e-59 230.3 135 88.1
p5.00_sc00356_p0013 Elaeis guineensis HOM05M002244 ORTHO05M002569 1.3e-58 229.2 135 87.4
Glyma.02G004100 Glycine max HOM05M002244 ORTHO05M002569 1.3e-58 229.2 141 80.9
MBI10_g13800_MAGBIO Magnolia biondii HOM05M002244 ORTHO05M002569 1.3e-58 229.2 135 86.7
Ma11_g00780 Musa acuminata HOM05M002244 ORTHO05M002569 1.3e-58 229.2 135 87.4
Solyc06g008260.3 Solanum lycopersicum HOM05M002244 ORTHO05M002569 1.7e-58 228.8 135 86.7
Solyc09g066430.3 Solanum lycopersicum HOM05M002244 ORTHO05M002569 1.7e-58 228.8 130 87.7
TRITD6Av1G143400 Triticum turgidum HOM05M002244 ORTHO05M002569 1.7e-58 228.8 148 83.1
p5.00_sc00284_p0012 Elaeis guineensis HOM05M002244 ORTHO05M002569 2.2e-58 228.4 135 87.4
DDU689G0463 Dioscorea dumetorum HOM05M002244 ORTHO05M002569 2.9e-58 228.0 141 85.1
DDU914G0056 Dioscorea dumetorum HOM05M002244 ORTHO05M002569 3.8e-58 227.6 135 85.9
Solyc06g083820.3 Solanum lycopersicum HOM05M002244 ORTHO05M002569 3.8e-58 227.6 130 88.5
p5.00_sc00071_p0079 Elaeis guineensis HOM05M002244 ORTHO05M002569 4.9e-58 227.3 134 87.3
Glyma.10G182500 Glycine max HOM05M002244 ORTHO05M002569 6.4e-58 226.9 132 84.8
Potri.008G168600 Populus trichocarpa HOM05M002244 ORTHO05M002569 6.4e-58 226.9 135 85.2
MBI11_g07550_MAGBIO Magnolia biondii HOM05M002244 ORTHO05M002569 1.1e-57 226.1 135 85.9
Potri.010G069900 Populus trichocarpa HOM05M002244 ORTHO05M002569 1.1e-57 226.1 135 84.4
evm.TU.AsparagusV1_01.794.V1.1 Asparagus officinalis HOM05M002244 ORTHO05M002569 1.4e-57 225.7 135 85.9
p5.00_sc00076_p0040 Elaeis guineensis HOM05M002244 ORTHO05M002569 1.9e-57 225.3 130 89.2
Asa6G01196 Allium sativum HOM05M002244 ORTHO05M002569 2.4e-57 224.9 134 86.6
CALSI_Maker00046330 Calamus simplicifolius HOM05M002244 ORTHO05M002569 3.2e-57 224.6 134 85.8
CDE07G0089 Ceratophyllum demersum HOM05M002244 ORTHO05M002569 3.2e-57 224.6 135 85.2
Glyma.10G004300 Glycine max HOM05M002244 ORTHO05M002569 4.2e-57 224.2 132 83.3
MBI07_g31094_MAGBIO Magnolia biondii HOM05M002244 ORTHO05M002569 4.2e-57 224.2 134 83.6
Aco008963 Ananas comosus HOM05M002244 ORTHO05M002569 5.4e-57 223.8 135 85.2
evm.TU.AsparagusV1_Unassigned.929.V1.1 Asparagus officinalis HOM05M002244 ORTHO05M002569 5.4e-57 223.8 136 83.8
CDE04G1325 Ceratophyllum demersum HOM05M002244 ORTHO05M002569 5.4e-57 223.8 135 84.4
Glyma.20G207500 Glycine max HOM05M002244 ORTHO05M002569 5.4e-57 223.8 132 83.3
CDE06G1677 Ceratophyllum demersum HOM05M002244 ORTHO05M002569 7.1e-57 223.4 135 84.4
HPP92_005131 Vanilla planifolia HOM05M002244 ORTHO05M002569 7.1e-57 223.4 135 83.7
ATR0820G200 Amborella trichopoda HOM05M002244 ORTHO05M002569 2.1e-56 221.9 135 84.4
CALSI_Maker00047737 Calamus simplicifolius HOM05M002244 ORTHO05M002569 2.1e-56 221.9 134 84.3
HPP92_008599 Vanilla planifolia HOM05M002244 ORTHO05M002569 4.6e-56 220.7 135 82.2
Potri.005G227300 Populus trichocarpa HOM05M002244 ORTHO05M002569 6.0e-56 220.3 130 84.6
Aco010121 Ananas comosus HOM05M002244 ORTHO05M002569 7.8e-56 219.9 135 83.7
Asa8G05327 Allium sativum HOM05M002244 ORTHO05M002569 1.3e-55 219.2 132 84.1
Potri.002G035700 Populus trichocarpa HOM05M002244 ORTHO05M002569 1.3e-55 219.2 130 83.8
Asa8G05316 Allium sativum HOM05M002244 ORTHO05M002569 1.7e-55 218.8 132 83.3
AT4G27090 Arabidopsis thaliana HOM05M002244 ORTHO05M002569 1.5e-54 215.7 135 82.2
Zosma01g24450 Zostera marina HOM05M002244 ORTHO05M002569 2.5e-54 214.9 135 83.0
AT2G20450 Arabidopsis thaliana HOM05M002244 ORTHO05M002569 4.3e-54 214.2 135 82.2
ATR0736G007 Amborella trichopoda HOM05M002244 ORTHO05M002569 5.6e-54 213.8 135 82.2
Zosma01g13840 Zostera marina HOM05M002244 ORTHO05M002569 7.3e-54 213.4 135 82.2
Spipo16G0050600 Spirodela polyrhiza HOM05M002244 ORTHO05M002569 1.6e-53 212.2 132 81.8
Spipo17G0049100 Spirodela polyrhiza HOM05M002244 ORTHO05M002569 6.2e-53 210.3 140 75.7
Asa1G01790 Allium sativum HOM05M002244 ORTHO05M002569 1.4e-52 209.1 131 80.2
CALSI_Maker00035055 Calamus simplicifolius HOM05M002244 ORTHO05M002569 1.2e-51 206.1 164 68.9
CALSI_Maker00038900 Calamus simplicifolius HOM05M002244 ORTHO05M002569 3.8e-50 201.1 115 87.8
AagrBONN_evm.TU.Sc2ySwM_117.1012 Anthoceros agrestis HOM05M002244 ORTHO05M002569 3.0e-47 191.4 130 72.3
Mapoly0030s0040 Marchantia polymorpha HOM05M002244 ORTHO05M002569 5.1e-47 190.7 130 73.1
AagrBONN_evm.TU.Sc2ySwM_344.3393 Anthoceros agrestis HOM05M002244 ORTHO05M002569 2.5e-46 188.3 130 72.3
SMO364G0935 Selaginella moellendorffii HOM05M002244 ORTHO05M002569 2.5e-46 188.3 130 70.8
Aco022852 Ananas comosus HOM05M002244 ORTHO05M002569 5.6e-46 187.2 161 67.1
Pp3c15_5860 Physcomitrium patens HOM05M002244 ORTHO05M002569 3.1e-44 181.4 130 66.9
Pp3c20_860 Physcomitrium patens HOM05M002244 ORTHO05M002569 4.0e-44 181.0 131 68.7
GWHGAORA024488 Cenchrus purpureus HOM05M002244 ORTHO05M002569 1.2e-43 179.5 101 90.1
Pp3c23_22060 Physcomitrium patens HOM05M002244 ORTHO05M002569 1.7e-42 175.6 138 64.5
PH02Gene45567 Phyllostachys edulis HOM05M002244 ORTHO05M002569 3.8e-42 174.5 102 89.2
CBR_g44545 Chara braunii HOM05M002244 ORTHO05M002569 6.4e-42 173.7 135 64.4
Asa1G01770 Allium sativum HOM05M002244 ORTHO05M002569 8.4e-42 173.3 132 68.9
Sspon.05G0007110-2B Saccharum spontaneum HOM05M000001 ORTHO05M000003 5.5e-41 170.6 109 82.6
Pp3c24_20890 Physcomitrium patens HOM05M002244 ORTHO05M002569 7.1e-41 170.2 130 64.6
Pp3c8_25050 Physcomitrium patens HOM05M002244 ORTHO05M002569 1.2e-40 169.5 131 65.6
Zm00001eb320980 Zea mays B73 HOM05M002244 ORTHO05M002569 6.7e-39 163.7 94 92.6
OB04G25750 Oryza brachyantha HOM05M002244 ORTHO05M002569 2.1e-37 158.7 93 89.2
TRIDC2AG055310 Triticum dicoccoides HOM05M002244 ORTHO05M002569 1.4e-36 156.0 92 87.0
CDE04G2880 Ceratophyllum demersum HOM05M002244 ORTHO05M002569 5.3e-36 154.1 89 85.4
Asa3G00422 Allium sativum HOM05M002244 ORTHO05M002569 6.9e-36 153.7 111 72.1
DDU088G0018 Dioscorea dumetorum HOM05M002244 ORTHO05M002569 2.2e-34 148.7 132 65.2
Cre17.g701200 Chlamydomonas reinhardtii HOM05M002244 ORTHO05M002569 4.9e-34 147.5 132 56.1
Sspon.05G0007070-3C Saccharum spontaneum HOM05M002244 ORTHO05M002569 2.5e-33 145.2 78 94.9
Glyma.09G110800 Glycine max HOM05M002244 ORTHO05M002569 3.3e-30 134.8 77 85.7
PRCOL_00003245 Prasinoderma coloniale HOM05M002244 ORTHO05M002569 1.3e-29 132.9 126 52.4
MCO11G510 Micromonas commoda HOM05M002244 ORTHO05M002569 8.2e-29 130.2 130 52.3
Solyc07g042840.1 Solanum lycopersicum HOM05M002244 ORTHO05M002569 2.4e-28 128.6 88 76.1
Zm00007a00008592 Zea mays B104 HOM05M002244 ORTHO05M002569 1.7e-21 105.9 62 85.5
Zm00001eb181600 Zea mays B73 HOM05M002244 ORTHO05M002569 1.4e-20 102.8 60 86.7
Zm00007a00016045 Zea mays B104 HOM05M002244 ORTHO05M002569 7.9e-16 87.0 48 91.7
Zm00007a00046720 Zea mays B104 HOM05M000150 ORTHO05M000099 7.9e-16 87.0 57 78.9
MBI11_g31270_MAGBIO Magnolia biondii HOM05M002244 ORTHO05M126943 7.4e-14 80.5 126 46.0
AET6Gv20599000 Aegilops tauschii HOM05M002244 ORTHO05M002569 1.7e-13 79.3 64 70.3
HPP92_008555 Vanilla planifolia HOM05M002244 ORTHO05M002569 1.5e-11 72.8 38 89.5
Glyma.06G038800 Glycine max HOM05M002244 ORTHO05M002569 3.8e-10 68.2 66 53.0
TRIDC1BG012990 Triticum dicoccoides HOM05M002244 ORTHO05M020334 5.0e-10 67.8 39 87.2
TRITD1Bv1G032960 Triticum turgidum HOM05M002244 ORTHO05M262621 8.5e-10 67.0 35 94.3
TRIDC7AG058530 Triticum dicoccoides HOM05M002244 ORTHO05M020334 4.2e-09 64.7 39 84.6
Zm00007a00028176 Zea mays B104 HOM05M002244 ORTHO05M002569 2.1e-08 62.4 74 52.7
TRIDC6BG025470 Triticum dicoccoides HOM05M002244 ORTHO05M020334 6.1e-08 60.8 45 73.3
TRITD2Av1G051420 Triticum turgidum HOM05M002244 ORTHO05M020334 1.0e-07 60.1 56 64.3
Zjn_sc00004.1.g00800.1.sm.mk Zoysia japonica ssp. nagirizaki HOM05M002244 ORTHO05M284389 6.7e-07 57.4 44 70.5
TRITD7Av1G226920 Triticum turgidum HOM05M002244 ORTHO05M020334 8.8e-07 57.0 45 71.1

Aegilops tauschii (1 genes)
Allium sativum (6 genes)
Amborella trichopoda (2 genes)
Ananas comosus (3 genes)
Anthoceros agrestis (2 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (4 genes)
Cenchrus purpureus (5 genes)
Ceratophyllum demersum (4 genes)
Chara braunii (1 genes)
Chlamydomonas reinhardtii (1 genes)
Digitaria exilis (4 genes)
Dioscorea dumetorum (3 genes)
Elaeis guineensis (4 genes)
Eragrostis curvula (2 genes)
Glycine max (6 genes)
Hordeum vulgare (2 genes)
Lolium perenne (1 genes)
Magnolia biondii (4 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (4 genes)
Musa acuminata (4 genes)
Oropetium thomaeum (2 genes)
Oryza alta (4 genes)
Oryza brachyantha (2 genes)
Oryza sativa Kitaake (2 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (2 genes)
Panicum hallii (2 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (5 genes)
Populus trichocarpa (4 genes)
Prasinoderma coloniale (1 genes)
Saccharum spontaneum (7 genes)
Secale cereale (2 genes)
Selaginella moellendorffii (1 genes)
Sequoiadendron giganteum (0 genes)
Setaria italica (2 genes)
Setaria viridis (2 genes)
Solanum lycopersicum (4 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (6 genes)
Triticum dicoccoides (7 genes)
Triticum turgidum (6 genes)
Vanilla planifolia (3 genes)
Zea mays B73 (4 genes)
Zea mays B104 (7 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (4 genes)

Program Settings