Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zjn_sc00007.1.g07080.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM05M005821 ORTHO05M007154 1.1e-60 235.7 121 100.0
EJB05_19713 Eragrostis curvula HOM05M005821 ORTHO05M007154 3.5e-35 151.0 99 76.8
Seita.1G293300 Setaria italica HOM05M005821 ORTHO05M007154 6.0e-35 150.2 99 77.8
Sevir.1G298500 Setaria viridis HOM05M005821 ORTHO05M007154 6.0e-35 150.2 99 77.8
PH02Gene22830 Phyllostachys edulis HOM05M005821 ORTHO05M007154 1.3e-34 149.1 99 75.8
Misin07G464300 Miscanthus sinensis HOM05M005821 ORTHO05M007154 1.7e-34 148.7 99 75.8
PH02Gene16780 Phyllostachys edulis HOM05M005821 ORTHO05M007154 3.0e-34 147.9 99 75.8
TraesCS6B03G0872600 Triticum aestivum HOM05M005821 ORTHO05M007154 3.9e-34 147.5 99 75.8
TRIDC6BG049390 Triticum dicoccoides HOM05M005821 ORTHO05M007154 3.9e-34 147.5 99 75.8
TRITD6Bv1G161750 Triticum turgidum HOM05M005821 ORTHO05M007154 3.9e-34 147.5 99 75.8
Ot_Chr1_g19268 Oropetium thomaeum HOM05M005821 ORTHO05M007154 5.0e-34 147.1 82 86.6
GWHGAORA024997 Cenchrus purpureus HOM05M005821 ORTHO05M007154 6.6e-34 146.7 86 84.9
GWHGAORA060421 Cenchrus purpureus HOM05M005821 ORTHO05M007154 6.6e-34 146.7 99 75.8
Sobic.004G263600 Sorghum bicolor HOM05M005821 ORTHO05M007154 8.6e-34 146.4 99 75.8
Pahal.1G368400 Panicum hallii HOM05M005821 ORTHO05M007154 1.1e-33 146.0 99 75.8
Sspon.04G0005110-1A Saccharum spontaneum HOM05M005821 ORTHO05M007154 1.5e-33 145.6 99 74.7
Sspon.04G0005110-2B Saccharum spontaneum HOM05M005821 ORTHO05M007154 1.5e-33 145.6 99 74.7
AET6Gv20698800 Aegilops tauschii HOM05M005821 ORTHO05M007154 2.5e-33 144.8 99 74.7
Sspon.04G0005110-1T Saccharum spontaneum HOM05M005821 ORTHO05M007154 2.5e-33 144.8 82 86.6
GWHGASIY032927 Secale cereale HOM05M005821 ORTHO05M007154 2.5e-33 144.8 99 74.7
TraesCS6A03G0736800 Triticum aestivum HOM05M005821 ORTHO05M007154 2.5e-33 144.8 99 74.7
TraesCS6D03G0619300 Triticum aestivum HOM05M005821 ORTHO05M007154 2.5e-33 144.8 99 74.7
TRITD6Av1G173990 Triticum turgidum HOM05M005821 ORTHO05M007154 2.5e-33 144.8 99 74.7
Sobic.006G045200 Sorghum bicolor HOM05M005821 ORTHO05M007154 4.3e-33 144.1 98 74.5
Dexi1B01G0023920 Digitaria exilis HOM05M005821 ORTHO05M007154 5.6e-33 143.7 99 73.7
V3.Lp_chr6_0G14392 Lolium perenne HOM05M005821 ORTHO05M007154 7.3e-33 143.3 82 85.4
Horvu_MOREX_6H01G424500 Hordeum vulgare HOM05M005821 ORTHO05M007154 9.5e-33 142.9 99 73.7
Bradi3g53090 Brachypodium distachyon HOM05M005821 ORTHO05M007154 2.8e-32 141.4 99 72.7
GWHGAZTO020386 Oryza alta HOM05M005821 ORTHO05M007154 2.8e-32 141.4 82 84.1
Zm00001eb252400 Zea mays B73 HOM05M005821 ORTHO05M007154 3.6e-32 141.0 99 72.7
Zm00007a00022570 Zea mays B104 HOM05M005821 ORTHO05M007154 3.6e-32 141.0 99 72.7
GWHGAZTO072027 Oryza alta HOM05M005821 ORTHO05M007154 1.8e-31 138.7 82 82.9
OB02G37030 Oryza brachyantha HOM05M005821 ORTHO05M007154 5.2e-31 137.1 82 81.7
OsKitaake02g306400 Oryza sativa Kitaake HOM05M005821 ORTHO05M007154 1.2e-30 136.0 82 81.7
OsR498G0204636900.01 Oryza sativa ssp. indica HOM05M005821 ORTHO05M007154 1.2e-30 136.0 82 81.7
Os02g0710800 Oryza sativa ssp. japonica HOM05M005821 ORTHO05M007154 1.2e-30 136.0 82 81.7
MBI10_g08556_MAGBIO Magnolia biondii HOM05M005821 ORTHO05M007154 2.5e-25 118.2 99 59.6
p5.00_sc00063_p0088 Elaeis guineensis HOM05M005821 ORTHO05M007154 2.8e-24 114.8 116 52.6
DDU512G0251 Dioscorea dumetorum HOM05M005821 ORTHO05M007154 8.1e-24 113.2 99 59.6
evm.TU.AsparagusV1_06.651.V1.1 Asparagus officinalis HOM05M005821 ORTHO05M007154 1.1e-23 112.8 99 56.6
CALSI_Maker00031755 Calamus simplicifolius HOM05M005821 ORTHO05M007154 1.1e-23 112.8 82 68.3
Glyma.07G164800 Glycine max HOM05M005821 ORTHO05M007154 2.3e-23 111.7 109 50.5
HPP92_000273 Vanilla planifolia HOM05M005821 ORTHO05M007154 4.0e-23 110.9 81 67.9
Ma06_g10930 Musa acuminata HOM05M005821 ORTHO05M007154 2.6e-22 108.2 99 55.6
Potri.010G112500 Populus trichocarpa HOM05M005821 ORTHO05M007154 3.2e-20 101.3 82 62.2
CDE10G0464 Ceratophyllum demersum HOM05M005821 ORTHO05M007154 5.4e-20 100.5 82 62.2
ATR0598G134 Amborella trichopoda HOM05M005821 ORTHO05M007154 2.7e-19 98.2 67 68.7
Solyc05g008040.4 Solanum lycopersicum HOM05M005821 ORTHO05M007154 2.7e-19 98.2 57 78.9
AT2G01440 Arabidopsis thaliana HOM05M005821 ORTHO05M007154 7.8e-19 96.7 85 56.5
Spipo14G0037400 Spirodela polyrhiza HOM05M005821 ORTHO05M007154 1.7e-18 95.5 82 57.3
Zosma03g03700 Zostera marina HOM05M005821 ORTHO05M007154 2.5e-17 91.7 75 61.3
GWHGAORA060444 Cenchrus purpureus HOM05M005821 ORTHO05M007154 1.6e-16 89.0 62 75.8
Pp3c19_21980 Physcomitrium patens HOM05M005821 ORTHO05M007154 4.0e-15 84.3 85 49.4
Mapoly0024s0015 Marchantia polymorpha HOM05M005821 ORTHO05M007154 7.6e-14 80.1 67 58.2
SMO200G0115 Selaginella moellendorffii HOM05M005821 ORTHO05M007154 1.3e-10 69.3 56 55.4
MCO01G157 Micromonas commoda HOM05M005821 ORTHO05M007154 4.8e-08 60.8 48 60.4
Cre01.g021850 Chlamydomonas reinhardtii HOM05M005821 ORTHO05M007154 1.4e-07 59.3 40 65.0
AagrBONN_evm.TU.Sc2ySwM_368.2128 Anthoceros agrestis HOM05M005821 ORTHO05M007154 2.4e-07 58.5 70 48.6

Aegilops tauschii (1 genes)
Allium sativum (0 genes)
Amborella trichopoda (1 genes)
Ananas comosus (0 genes)
Anthoceros agrestis (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus purpureus (3 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chlamydomonas reinhardtii (1 genes)
Digitaria exilis (1 genes)
Dioscorea dumetorum (1 genes)
Elaeis guineensis (1 genes)
Eragrostis curvula (1 genes)
Glycine max (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Magnolia biondii (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (1 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (1 genes)
Oryza alta (2 genes)
Oryza brachyantha (1 genes)
Oryza sativa Kitaake (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Panicum hallii (1 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (3 genes)
Secale cereale (1 genes)
Selaginella moellendorffii (1 genes)
Sequoiadendron giganteum (0 genes)
Setaria italica (1 genes)
Setaria viridis (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum dicoccoides (1 genes)
Triticum turgidum (2 genes)
Vanilla planifolia (1 genes)
Zea mays B73 (1 genes)
Zea mays B104 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

Program Settings