Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zjn_sc00004.1.g09400.1.es.mkhc Zoysia japonica ssp. nagirizaki HOM05M046499 ORTHO05M001213 3.0e-87 324.3 156 100.0
Zjn_sc00004.1.g09470.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M046499 ORTHO05M001213 3.3e-30 134.8 78 85.9
EJB05_39895 Eragrostis curvula HOM05M000204 ORTHO05M001213 4.1e-28 127.9 92 68.5
EJB05_39783 Eragrostis curvula HOM05M000204 ORTHO05M001213 4.2e-25 117.9 125 51.2
EJB05_56580 Eragrostis curvula HOM05M000204 ORTHO05M001213 4.2e-25 117.9 125 51.2
OsKitaake09g203200 Oryza sativa Kitaake HOM05M000204 ORTHO05M001213 2.0e-19 99.0 121 44.6
OsKitaake09g203400 Oryza sativa Kitaake HOM05M000204 ORTHO05M001213 1.5e-17 92.8 121 40.5
GWHGAZTO052791 Oryza alta HOM05M000204 ORTHO05M001213 3.6e-16 88.2 121 39.7
OsR498G0917963800.01 Oryza sativa ssp. indica HOM05M000204 ORTHO05M001213 3.6e-16 88.2 121 42.1
GWHGAORA026271 Cenchrus purpureus HOM05M000204 ORTHO05M001213 1.8e-15 85.9 122 39.3
Misin12G180500 Miscanthus sinensis HOM05M000204 ORTHO05M001213 1.1e-12 76.6 68 52.9
OB09G26640 Oryza brachyantha HOM05M000204 ORTHO05M001213 1.4e-12 76.3 122 38.5
Sspon.01G0003080-1A Saccharum spontaneum HOM05M000204 ORTHO05M001213 4.1e-12 74.7 120 38.3
Sspon.01G0003080-2C Saccharum spontaneum HOM05M000204 ORTHO05M001213 9.1e-12 73.6 120 38.3
GWHGAORA022945 Cenchrus purpureus HOM05M000204 ORTHO05M001213 1.2e-11 73.2 91 41.8
V3.Lp_chr5_0G17548 Lolium perenne HOM05M000204 ORTHO05M009282 1.2e-11 73.2 92 41.3
OsKitaake09g203300 Oryza sativa Kitaake HOM05M000204 ORTHO05M001213 1.2e-11 73.2 77 48.1
Sobic.001G500500 Sorghum bicolor HOM05M000204 ORTHO05M001213 1.2e-11 73.2 130 35.4
OB09G26610 Oryza brachyantha HOM05M000204 ORTHO05M001213 3.5e-11 71.6 92 41.3
Seita.7G201500 Setaria italica HOM05M000204 ORTHO05M001213 1.7e-10 69.3 129 38.0
Dexi4A01G0023670 Digitaria exilis HOM05M000204 ORTHO05M001213 2.9e-10 68.6 125 36.8
TraesCS4B03G0024800 Triticum aestivum HOM05M000204 ORTHO05M009282 3.8e-10 68.2 94 41.5
TRIDC4BG002160 Triticum dicoccoides HOM05M000204 ORTHO05M009282 3.8e-10 68.2 94 41.5
TRITD4Bv1G002820 Triticum turgidum HOM05M000204 ORTHO05M009282 3.8e-10 68.2 94 41.5
Dexi4B01G0023090 Digitaria exilis HOM05M000204 ORTHO05M001213 5.0e-10 67.8 127 37.0
Bradi4g17401 Brachypodium distachyon HOM05M000204 ORTHO05M011595 1.9e-09 65.9 116 34.5
GWHGAZTO012391 Oryza alta HOM05M000204 ORTHO05M001213 1.9e-09 65.9 87 41.4
Seita.7G255000 Setaria italica HOM05M000204 ORTHO05M001213 1.9e-09 65.9 63 52.4
Sevir.7G266400 Setaria viridis HOM05M000204 ORTHO05M001213 1.9e-09 65.9 63 52.4
Dexi9A01G0034050 Digitaria exilis HOM05M000204 ORTHO05M001213 2.5e-09 65.5 93 38.7
Dexi9A01G0034150 Digitaria exilis HOM05M000204 ORTHO05M001213 2.5e-09 65.5 93 38.7
Dexi9B01G0032910 Digitaria exilis HOM05M000204 ORTHO05M001213 2.5e-09 65.5 93 38.7
Horvu_MOREX_4H01G011400 Hordeum vulgare HOM05M000204 ORTHO05M009282 2.5e-09 65.5 94 40.4
V3.Lp_chr5_0G17358 Lolium perenne HOM05M000204 ORTHO05M001213 4.2e-09 64.7 69 47.8
TRIDC7BG040160 Triticum dicoccoides HOM05M000204 ORTHO05M001213 4.2e-09 64.7 130 36.2
TRITD7Bv1G138560 Triticum turgidum HOM05M000204 ORTHO05M001213 4.2e-09 64.7 130 36.2
TraesCS7B03G0676400 Triticum aestivum HOM05M000204 ORTHO05M001213 5.5e-09 64.3 83 47.0
TraesCS7B03G0676600 Triticum aestivum HOM05M000204 ORTHO05M001213 5.5e-09 64.3 130 36.2
EJB05_53445 Eragrostis curvula HOM05M000204 ORTHO05M001213 7.2e-09 63.9 90 40.0
V3.Lp_chr6_0G6836 Lolium perenne HOM05M000204 ORTHO05M011595 1.2e-08 63.2 126 33.3
OsKitaake09g195600 Oryza sativa Kitaake HOM05M000204 ORTHO05M001213 1.2e-08 63.2 88 39.8
Sevir.7G213300 Setaria viridis HOM05M000204 ORTHO05M001213 1.2e-08 63.2 129 35.7
TraesCS5B03G0696900 Triticum aestivum HOM05M000204 ORTHO05M009282 1.2e-08 63.2 98 38.8
TRITD4Av1G202390 Triticum turgidum HOM05M000204 ORTHO05M009282 1.2e-08 63.2 91 39.6
TRITD5Bv1G151680 Triticum turgidum HOM05M000204 ORTHO05M009282 1.2e-08 63.2 98 38.8
TRITD5Bv1G151380 Triticum turgidum HOM05M000204 ORTHO05M009282 1.6e-08 62.8 98 38.8
V3.Lp_chr4_0G18480 Lolium perenne HOM05M000204 ORTHO05M012607 2.1e-08 62.4 81 43.2
GWHGAZTO026301 Oryza alta HOM05M000204 ORTHO05M001213 2.1e-08 62.4 77 44.2
Os11g0557400 Oryza sativa ssp. japonica HOM05M000204 ORTHO05M001213 2.1e-08 62.4 75 42.7
TraesCS4B03G0022900 Triticum aestivum HOM05M000204 ORTHO05M009282 2.8e-08 62.0 94 38.3
TraesCS4B03G0024100 Triticum aestivum HOM05M000204 ORTHO05M009282 2.8e-08 62.0 94 38.3
AET5Gv20741900 Aegilops tauschii HOM05M000204 ORTHO05M001213 3.6e-08 61.6 71 43.7
EJB05_04304 Eragrostis curvula HOM05M000204 ORTHO05M001213 3.6e-08 61.6 88 39.8
GWHGASIY024022 Secale cereale HOM05M000204 ORTHO05M015642 3.6e-08 61.6 67 46.3
TraesCS3B03G0401300 Triticum aestivum HOM05M000204 ORTHO05M009282 3.6e-08 61.6 92 41.3
TraesCSU03G0157400 Triticum aestivum HOM05M000204 ORTHO05M001213 3.6e-08 61.6 71 43.7
AET4Gv20018000 Aegilops tauschii HOM05M000204 ORTHO05M009282 4.7e-08 61.2 94 39.4
AET5Gv20628800 Aegilops tauschii HOM05M000204 ORTHO05M009282 4.7e-08 61.2 98 37.8
EJB05_04303 Eragrostis curvula HOM05M000204 ORTHO05M001213 4.7e-08 61.2 88 39.8
Horvu_MOREX_4H01G011700 Hordeum vulgare HOM05M000204 ORTHO05M009282 4.7e-08 61.2 90 38.9
GWHGASIY024023 Secale cereale HOM05M000204 ORTHO05M015642 4.7e-08 61.2 67 46.3
TraesCS4A03G0760300 Triticum aestivum HOM05M000204 ORTHO05M009282 4.7e-08 61.2 91 38.5
TraesCS5D03G0631400 Triticum aestivum HOM05M000204 ORTHO05M009282 4.7e-08 61.2 98 37.8
Horvu_MOREX_6H01G210800 Hordeum vulgare HOM05M000204 ORTHO05M001213 6.1e-08 60.8 118 33.1
Pahal.5G503300 Panicum hallii HOM05M000204 ORTHO05M001213 6.1e-08 60.8 88 43.2
TraesCS5D03G0770800 Triticum aestivum HOM05M000204 ORTHO05M001213 6.1e-08 60.8 67 46.3
TraesCS5D03G0787000 Triticum aestivum HOM05M000204 ORTHO05M001213 6.1e-08 60.8 67 46.3
TRITD4Bv1G002540 Triticum turgidum HOM05M000204 ORTHO05M009282 8.0e-08 60.5 94 37.2
TRITD4Bv1G002690 Triticum turgidum HOM05M000204 ORTHO05M009282 8.0e-08 60.5 94 37.2
OsKitaake09g195500 Oryza sativa Kitaake HOM05M000204 ORTHO05M001213 1.0e-07 60.1 95 36.8
OsKitaake09g196600 Oryza sativa Kitaake HOM05M000204 ORTHO05M001213 1.0e-07 60.1 90 38.9
Os09g0558600 Oryza sativa ssp. japonica HOM05M000204 ORTHO05M001213 1.0e-07 60.1 90 38.9
GWHGASIY027459 Secale cereale HOM05M000204 ORTHO05M001213 1.0e-07 60.1 74 40.5
GWHGAORA033243 Cenchrus purpureus HOM05M000204 ORTHO05M001213 1.4e-07 59.7 101 34.7
Ot_Chr5_g04999 Oropetium thomaeum HOM05M000204 ORTHO05M001213 1.4e-07 59.7 84 36.9
AET1Gv20494700 Aegilops tauschii HOM05M000204 ORTHO05M001213 1.8e-07 59.3 63 46.0
Horvu_MOREX_5H01G484800 Hordeum vulgare HOM05M000204 ORTHO05M001213 1.8e-07 59.3 67 44.8
Misin07G354300 Miscanthus sinensis HOM05M000204 ORTHO05M001213 1.8e-07 59.3 65 41.5
TraesCS1D03G0496800 Triticum aestivum HOM05M000204 ORTHO05M001213 1.8e-07 59.3 63 46.0
Horvu_MOREX_4H01G011900 Hordeum vulgare HOM05M000204 ORTHO05M009282 2.3e-07 58.9 93 38.7
V3.Lp_chr6_0G6882 Lolium perenne HOM05M000204 ORTHO05M011595 3.0e-07 58.5 126 32.5
TRIDC5BG053590 Triticum dicoccoides HOM05M000204 ORTHO05M001213 3.0e-07 58.5 67 46.3
TRITD5Bv1G178280 Triticum turgidum HOM05M000204 ORTHO05M001213 3.0e-07 58.5 67 46.3
TRITD5Bv1G178420 Triticum turgidum HOM05M000204 ORTHO05M001213 3.0e-07 58.5 67 46.3
AET5Gv20749400 Aegilops tauschii HOM05M000204 ORTHO05M001213 4.0e-07 58.2 63 44.4
TraesCS5D03G0746500 Triticum aestivum HOM05M000204 ORTHO05M001213 4.0e-07 58.2 63 44.4
AET1Gv20033300 Aegilops tauschii HOM05M000204 ORTHO05M001213 5.2e-07 57.8 132 34.8
Bradi3g46137 Brachypodium distachyon HOM05M000204 ORTHO05M001213 5.2e-07 57.8 90 42.2
Bradi3g46151 Brachypodium distachyon HOM05M000204 ORTHO05M001213 5.2e-07 57.8 90 42.2
TRITD5Bv1G173690 Triticum turgidum HOM05M000204 ORTHO05M001213 5.2e-07 57.8 63 44.4
Dexi3B01G0017540 Digitaria exilis HOM05M000204 ORTHO05M001213 6.8e-07 57.4 62 43.5
EJB05_08035 Eragrostis curvula HOM05M000204 ORTHO05M001749 6.8e-07 57.4 71 38.0
V3.Lp_chr7_0.1G8232 Lolium perenne HOM05M000204 ORTHO05M012607 6.8e-07 57.4 87 41.4
OsKitaake03g061500 Oryza sativa Kitaake HOM05M000204 ORTHO05M004516 8.9e-07 57.0 62 43.5
OsR498G0305324900.01 Oryza sativa ssp. indica HOM05M000204 ORTHO05M004516 8.9e-07 57.0 62 43.5
Seita.6G053000 Setaria italica HOM05M000204 ORTHO05M001213 1.2e-06 56.6 84 39.3
Seita.6G053100 Setaria italica HOM05M000204 ORTHO05M001213 1.2e-06 56.6 84 39.3
Sevir.6G050000 Setaria viridis HOM05M000204 ORTHO05M001213 1.2e-06 56.6 84 39.3
Sevir.6G050100 Setaria viridis HOM05M000204 ORTHO05M001213 1.2e-06 56.6 84 39.3
Sevir.6G050150 Setaria viridis HOM05M000204 ORTHO05M001213 1.2e-06 56.6 84 39.3
V3.Lp_chr7_0.1G8226 Lolium perenne HOM05M000204 ORTHO05M012607 1.5e-06 56.2 87 41.4
V3.Lp_scaffold_4008G2 Lolium perenne HOM05M000204 ORTHO05M012607 1.5e-06 56.2 87 41.4
V3.Lp_scaffold_9149G2 Lolium perenne HOM05M000204 ORTHO05M012607 1.5e-06 56.2 87 41.4
Seita.6G053200 Setaria italica HOM05M000204 ORTHO05M001213 1.5e-06 56.2 64 42.2
OB02G42450 Oryza brachyantha HOM05M000204 ORTHO05M003858 2.0e-06 55.8 62 43.5
OsKitaake09g203900 Oryza sativa Kitaake HOM05M000204 ORTHO05M001213 2.0e-06 55.8 127 33.1
Os09g0567000 Oryza sativa ssp. japonica HOM05M000204 ORTHO05M001213 2.0e-06 55.8 127 33.1
TraesCS4A03G0758600 Triticum aestivum HOM05M000204 ORTHO05M009282 2.0e-06 55.8 74 41.9
TRIDC1AG001500 Triticum dicoccoides HOM05M000204 ORTHO05M001213 2.0e-06 55.8 132 34.1
GWHGAORA041022 Cenchrus purpureus HOM05M000204 ORTHO05M001213 2.6e-06 55.5 64 40.6
GWHGAZTO099178 Oryza alta HOM05M000204 ORTHO05M001213 2.6e-06 55.5 48 54.2
EJB05_50900 Eragrostis curvula HOM05M000204 ORTHO05M001213 3.4e-06 55.1 96 35.4
TraesCS4A03G1098100 Triticum aestivum HOM05M000204 ORTHO05M001213 3.4e-06 55.1 62 45.2
TRITD4Av1G249650 Triticum turgidum HOM05M000204 ORTHO05M001213 3.4e-06 55.1 62 45.2
TRITD4Bv1G003300 Triticum turgidum HOM05M000204 ORTHO05M009282 3.4e-06 55.1 72 43.1
Dexi2A01G0036640 Digitaria exilis HOM05M000204 ORTHO05M001213 5.7e-06 54.3 70 40.0
GWHGAZTO078506 Oryza alta HOM05M000204 ORTHO05M012607 5.7e-06 54.3 42 54.8
Bradi1g72580 Brachypodium distachyon HOM05M000204 ORTHO05M001749 7.5e-06 53.9 74 33.8
EJB05_35732 Eragrostis curvula HOM05M000204 ORTHO05M001213 7.5e-06 53.9 69 42.0
OsKitaake03g059500 Oryza sativa Kitaake HOM05M000204 ORTHO05M004516 7.5e-06 53.9 73 37.0
OsR498G0305319000.01 Oryza sativa ssp. indica HOM05M000204 ORTHO05M004516 7.5e-06 53.9 73 37.0
Os03g0176800 Oryza sativa ssp. japonica HOM05M000204 ORTHO05M004516 7.5e-06 53.9 73 37.0
TraesCS5B03G0697000 Triticum aestivum HOM05M000204 ORTHO05M009282 7.5e-06 53.9 75 37.3
TRITD5Bv1G151750 Triticum turgidum HOM05M000204 ORTHO05M009282 7.5e-06 53.9 75 37.3
Bradi4g36895 Brachypodium distachyon HOM05M000204 ORTHO05M001213 9.8e-06 53.5 70 41.4
Dexi3A01G0017090 Digitaria exilis HOM05M000204 ORTHO05M001213 9.8e-06 53.5 62 38.7
EJB05_18614 Eragrostis curvula HOM05M000204 ORTHO05M001213 9.8e-06 53.5 65 41.5
TraesCS1D03G0777600 Triticum aestivum HOM05M000204 ORTHO05M001213 9.8e-06 53.5 65 43.1
TraesCS3B03G0416100 Triticum aestivum HOM05M000204 ORTHO05M001749 9.8e-06 53.5 103 33.0
TRITD3Bv1G065870 Triticum turgidum HOM05M000204 ORTHO05M001749 9.8e-06 53.5 103 33.0

Aegilops tauschii (6 genes)
Allium sativum (0 genes)
Amborella trichopoda (0 genes)
Ananas comosus (0 genes)
Anthoceros agrestis (0 genes)
Arabidopsis thaliana (0 genes)
Asparagus officinalis (0 genes)
Brachypodium distachyon (5 genes)
Calamus simplicifolius (0 genes)
Cenchrus purpureus (4 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (8 genes)
Dioscorea dumetorum (0 genes)
Elaeis guineensis (0 genes)
Eragrostis curvula (10 genes)
Glycine max (0 genes)
Hordeum vulgare (5 genes)
Lolium perenne (9 genes)
Magnolia biondii (0 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (0 genes)
Oropetium thomaeum (1 genes)
Oryza alta (5 genes)
Oryza brachyantha (3 genes)
Oryza sativa Kitaake (9 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (4 genes)
Panicum hallii (1 genes)
Phyllostachys edulis (0 genes)
Physcomitrium patens (0 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (2 genes)
Secale cereale (3 genes)
Selaginella moellendorffii (0 genes)
Sequoiadendron giganteum (0 genes)
Setaria italica (5 genes)
Setaria viridis (5 genes)
Solanum lycopersicum (0 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (0 genes)
Triticum aestivum (19 genes)
Triticum dicoccoides (4 genes)
Triticum turgidum (14 genes)
Vanilla planifolia (0 genes)
Zea mays B73 (0 genes)
Zea mays B104 (0 genes)
Zostera marina (0 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings