Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
V3.Lp_chr7_0.1G1214 Lolium perenne HOM05M001115 ORTHO05M005596 2.5e-93 344.7 183 100.0
V3.Lp_chr7_0.1G1242 Lolium perenne HOM05M001115 ORTHO05M005596 2.5e-93 344.7 183 100.0
V3.Lp_scaffold_4559G12 Lolium perenne HOM05M001115 ORTHO05M005596 2.5e-93 344.7 183 100.0
V3.Lp_scaffold_5331G6 Lolium perenne HOM05M001115 ORTHO05M005596 2.5e-93 344.7 183 100.0
V3.Lp_scaffold_891G12 Lolium perenne HOM05M001115 ORTHO05M005596 2.5e-93 344.7 183 100.0
V3.Lp_scaffold_4807G8 Lolium perenne HOM05M001115 ORTHO05M005596 4.7e-92 340.5 181 100.0
TraesCS2D03G0545000 Triticum aestivum HOM05M001115 ORTHO05M005596 5.4e-88 327.0 183 87.4
TraesCSU03G0369400 Triticum aestivum HOM05M001115 ORTHO05M005596 5.4e-88 327.0 183 87.4
Horvu_MOREX_5H01G373900 Hordeum vulgare HOM05M001115 ORTHO05M005596 2.0e-87 325.1 183 94.0
TRITD3Bv1G004220 Triticum turgidum HOM05M001115 ORTHO05M005596 3.5e-87 324.3 183 86.9
Horvu_MOREX_3H01G394300 Hordeum vulgare HOM05M001115 ORTHO05M005596 1.3e-86 322.4 181 94.5
TraesCS3B03G0454600 Triticum aestivum HOM05M001115 ORTHO05M005596 1.3e-86 322.4 183 92.3
GWHGASIY019874 Secale cereale HOM05M001115 ORTHO05M005596 3.9e-86 320.9 181 93.9
TraesCS3A03G0999900 Triticum aestivum HOM05M001115 ORTHO05M005596 1.5e-85 318.9 181 85.1
TRITD1Bv1G042890 Triticum turgidum HOM05M001115 ORTHO05M005596 1.5e-85 318.9 181 93.4
OsKitaake12g099600 Oryza sativa Kitaake HOM05M001115 ORTHO05M005596 2.5e-85 318.2 181 93.9
OsKitaake10g165810 Oryza sativa Kitaake HOM05M001115 ORTHO05M005596 3.3e-85 317.8 181 93.9
OsKitaake10g165828 Oryza sativa Kitaake HOM05M001115 ORTHO05M005596 3.3e-85 317.8 181 93.9
TRITD1Bv1G206410 Triticum turgidum HOM05M001115 ORTHO05M005596 5.6e-85 317.0 183 84.7
OsKitaake02g154500 Oryza sativa Kitaake HOM05M001115 ORTHO05M005596 7.3e-85 316.6 181 93.4
TRIDC3AG060930 Triticum dicoccoides HOM05M001115 ORTHO05M005596 1.2e-84 315.8 179 85.5
OsKitaake01g066196 Oryza sativa Kitaake HOM05M001115 ORTHO05M005596 1.6e-84 315.5 181 93.4
Bradi1g05764 Brachypodium distachyon HOM05M001115 ORTHO05M005596 2.8e-84 314.7 181 92.3
Pahal.3G033600 Panicum hallii HOM05M001115 ORTHO05M005596 1.8e-83 312.0 181 92.3
TraesCS1B03G1091200 Triticum aestivum HOM05M001115 ORTHO05M005596 3.1e-83 311.2 181 84.5
GWHGAORA003696 Cenchrus purpureus HOM05M001115 ORTHO05M005596 5.2e-83 310.5 181 91.7
TraesCS4A03G0316400 Triticum aestivum HOM05M001115 ORTHO05M005596 7.5e-82 306.6 183 82.5
TRIDC4AG020380 Triticum dicoccoides HOM05M001115 ORTHO05M005596 3.7e-81 304.3 181 82.9
GWHGASIY039892 Secale cereale HOM05M001115 ORTHO05M005596 1.4e-80 302.4 181 89.0
TRIDC7BG017870 Triticum dicoccoides HOM05M001115 ORTHO05M005596 5.4e-80 300.4 181 89.0
AET4Gv20392300 Aegilops tauschii HOM05M001115 ORTHO05M005596 3.5e-79 297.7 181 80.1
TraesCS4D03G0386200 Triticum aestivum HOM05M001115 ORTHO05M005596 3.5e-79 297.7 181 80.1
TRITD3Av1G245780 Triticum turgidum HOM05M001115 ORTHO05M005596 1.7e-78 295.4 165 85.5
TRITD3Bv1G075930 Triticum turgidum HOM05M001115 ORTHO05M005596 1.5e-77 292.4 165 93.9
Zm00007a00017135 Zea mays B104 HOM05M001115 ORTHO05M005596 2.1e-76 288.5 164 93.3
Asa0G01758 Allium sativum HOM05M001115 ORTHO05M005596 4.0e-75 284.3 178 83.7
TRITD4Av1G078280 Triticum turgidum HOM05M001115 ORTHO05M005596 9.8e-74 279.6 165 82.4
Aco024830 Ananas comosus HOM05M001115 ORTHO05M005454 5.4e-72 273.9 161 88.8
GWHGASIY019913 Secale cereale HOM05M001115 ORTHO05M005596 7.1e-72 273.5 181 77.3
Ot_Un136_gn40116 Oropetium thomaeum HOM05M001115 ORTHO05M005596 6.0e-71 270.4 181 75.7
Ot_Un168_gn40559 Oropetium thomaeum HOM05M001115 ORTHO05M005596 6.0e-71 270.4 181 75.7
Ot_Un3_gn40885 Oropetium thomaeum HOM05M001115 ORTHO05M005596 6.0e-71 270.4 181 75.7
Ot_Un9_gn41194 Oropetium thomaeum HOM05M001115 ORTHO05M005596 6.0e-71 270.4 181 75.7
TRITD5Bv1G143250 Triticum turgidum HOM05M001115 ORTHO05M005596 1.5e-69 265.8 152 84.9
Zm00007a00022331 Zea mays B104 HOM05M001115 ORTHO05M007197 1.9e-69 265.4 156 92.9
TRIDC5BG041730 Triticum dicoccoides HOM05M001115 ORTHO05M005596 2.1e-68 261.9 150 84.7
Seita.8G059100 Setaria italica HOM05M001115 ORTHO05M005596 8.1e-68 260.0 152 92.1
ATCG01090 Arabidopsis thaliana HOM05M001115 ORTHO05M005596 3.1e-67 258.1 165 80.6
Seita.J016500 Setaria italica HOM05M001115 ORTHO05M005596 5.8e-66 253.8 164 76.8
Zm00007a00002175 Zea mays B104 HOM05M001115 ORTHO05M005596 9.9e-66 253.1 147 91.2
Zm00007a00019265 Zea mays B104 HOM05M001115 ORTHO05M005596 2.9e-65 251.5 171 75.4
Bradi1g46652 Brachypodium distachyon HOM05M001115 ORTHO05M005596 4.9e-65 250.8 181 72.9
Solyc03g013615.1 Solanum lycopersicum HOM05M001115 ORTHO05M005596 5.4e-64 247.3 160 71.9
TRIDC3AG071550 Triticum dicoccoides HOM05M001115 ORTHO05M005596 5.4e-64 247.3 141 92.9
Pahal.5G371700 Panicum hallii HOM05M001115 ORTHO05M005596 7.8e-63 243.4 136 93.4
Pahal.J030500 Panicum hallii HOM05M001115 ORTHO05M005596 7.8e-63 243.4 136 93.4
Aco031707 Ananas comosus HOM05M001115 ORTHO05M005596 8.1e-60 233.4 132 91.7
TraesCS5B03G0650500 Triticum aestivum HOM05M001115 ORTHO05M005596 1.7e-57 225.7 150 76.0
Solyc11g021220.2 Solanum lycopersicum HOM05M001115 ORTHO05M005596 1.3e-52 209.5 140 70.0
Mapoly0048s0041 Marchantia polymorpha HOM05M001115 ORTHO05M005596 4.8e-52 207.6 162 64.8
TraesCS7B03G1065000 Triticum aestivum HOM05M001115 ORTHO05M005596 8.1e-52 206.8 100 95.0
Aco030998 Ananas comosus HOM05M001115 ORTHO05M005454 2.4e-51 205.3 103 89.3
TRIDC1AG019720 Triticum dicoccoides HOM05M001115 ORTHO05M005596 3.1e-51 204.9 101 94.1
Zm00007a00001158 Zea mays B104 HOM05M001115 ORTHO05M005454 3.1e-51 204.9 104 90.4
TRIDC4AG060040 Triticum dicoccoides HOM05M001115 ORTHO05M005596 2.2e-49 198.7 102 91.2
MBI10_g47589_MAGBIO Magnolia biondii HOM05M001115 ORTHO05M007197 2.1e-47 192.2 134 79.1
MBI10_g47594_MAGBIO Magnolia biondii HOM05M001115 ORTHO05M007197 2.1e-47 192.2 134 79.1
AET2Gv20535200 Aegilops tauschii HOM05M001115 ORTHO05M005596 3.4e-42 174.9 82 97.6
GWHGASIY032784 Secale cereale HOM05M001115 ORTHO05M005596 4.0e-35 151.4 115 67.8
SMO086G0041 Selaginella moellendorffii HOM05M001115 ORTHO05M005596 5.3e-35 151.0 155 51.0
Glyma.18G155500 Glycine max HOM05M001115 ORTHO05M005596 1.0e-33 146.7 92 69.6
Solyc02g011780.3 Solanum lycopersicum HOM05M001115 ORTHO05M005596 2.9e-33 145.2 146 54.1
Sobic.001G230050 Sorghum bicolor HOM05M001115 ORTHO05M005596 2.7e-31 138.7 66 93.9
TRIDC1AG031530 Triticum dicoccoides HOM05M001115 ORTHO05M005596 7.9e-31 137.1 69 91.3
EJB05_36092 Eragrostis curvula HOM05M001115 ORTHO05M005596 1.0e-30 136.7 82 91.5
Ot_Chr4_gn34890 Oropetium thomaeum HOM05M001115 ORTHO05M005596 3.7e-28 128.3 83 73.5
TRIDC7AG039730 Triticum dicoccoides HOM05M001115 ORTHO05M005596 6.3e-28 127.5 89 69.7
GWHGAORA010086 Cenchrus purpureus HOM05M001115 ORTHO05M005596 3.1e-27 125.2 102 63.7
AET6Gv20624100 Aegilops tauschii HOM05M001115 ORTHO05M005596 3.4e-26 121.7 67 83.6
AET2Gv20519200 Aegilops tauschii HOM05M001115 ORTHO05M005596 3.2e-24 115.2 54 94.4
AET3Gv20449800 Aegilops tauschii HOM05M001115 ORTHO05M005596 1.0e-22 110.2 61 91.8
TraesCS1B03G0285500 Triticum aestivum HOM05M001115 ORTHO05M005596 5.1e-22 107.8 53 94.3
GWHGAORA014196 Cenchrus purpureus HOM05M001115 ORTHO05M005596 6.7e-22 107.5 61 90.2
TRIDC5AG036160 Triticum dicoccoides HOM05M001115 ORTHO05M005596 1.5e-21 106.3 61 88.5
OsR498G1018398800.01 Oryza sativa ssp. indica HOM05M001115 ORTHO05M005596 1.6e-20 102.8 67 77.6
Seita.6G106300 Setaria italica HOM05M001115 ORTHO05M005596 1.5e-18 96.3 55 81.8
Aco020235 Ananas comosus HOM05M001115 ORTHO05M005596 3.4e-18 95.1 73 67.1
Aco030030 Ananas comosus HOM05M001115 ORTHO05M005596 3.4e-18 95.1 73 67.1
TRIDC1BG024380 Triticum dicoccoides HOM05M001115 ORTHO05M005596 1.7e-17 92.8 64 68.8
Solyc01g086880.3 Solanum lycopersicum HOM05M001115 ORTHO05M005596 2.2e-17 92.4 105 42.9
Potri.013G074950 Populus trichocarpa HOM05M001115 ORTHO05M005596 2.1e-15 85.9 45 84.4
AET5Gv20780900 Aegilops tauschii HOM05M001115 ORTHO05M005596 3.1e-11 72.0 34 97.1
AET5Gv20497000 Aegilops tauschii HOM05M001115 ORTHO05M005596 1.6e-07 59.7 29 89.7

Aegilops tauschii (7 genes)
Allium sativum (1 genes)
Amborella trichopoda (0 genes)
Ananas comosus (5 genes)
Anthoceros agrestis (0 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (0 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (0 genes)
Cenchrus purpureus (3 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (0 genes)
Dioscorea dumetorum (0 genes)
Elaeis guineensis (0 genes)
Eragrostis curvula (1 genes)
Glycine max (1 genes)
Hordeum vulgare (2 genes)
Lolium perenne (6 genes)
Magnolia biondii (2 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (0 genes)
Musa acuminata (0 genes)
Oropetium thomaeum (5 genes)
Oryza alta (0 genes)
Oryza brachyantha (0 genes)
Oryza sativa Kitaake (5 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (0 genes)
Panicum hallii (3 genes)
Phyllostachys edulis (0 genes)
Physcomitrium patens (0 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (0 genes)
Secale cereale (4 genes)
Selaginella moellendorffii (1 genes)
Sequoiadendron giganteum (0 genes)
Setaria italica (3 genes)
Setaria viridis (0 genes)
Solanum lycopersicum (4 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (0 genes)
Triticum aestivum (10 genes)
Triticum dicoccoides (11 genes)
Triticum turgidum (7 genes)
Vanilla planifolia (0 genes)
Zea mays B73 (0 genes)
Zea mays B104 (5 genes)
Zostera marina (0 genes)
Zoysia japonica ssp. nagirizaki (0 genes)

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