Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
V3.Lp_chr3_0G14950 Lolium perenne HOM05M005811 ORTHO05M006957 3.4e-40 167.2 87 100.0
V3.Lp_chr3_0G14960 Lolium perenne HOM05M005811 ORTHO05M006957 3.4e-40 167.2 87 100.0
V3.Lp_chr3_0G8 Lolium perenne HOM05M005811 ORTHO05M006957 3.4e-40 167.2 87 100.0
V3.Lp_chr7_0.1G1248 Lolium perenne HOM05M005811 ORTHO05M006957 3.4e-40 167.2 87 100.0
V3.Lp_scaffold_4807G24 Lolium perenne HOM05M005811 ORTHO05M006957 3.4e-40 167.2 87 100.0
V3.Lp_scaffold_5331G16 Lolium perenne HOM05M005811 ORTHO05M006957 3.4e-40 167.2 87 100.0
V3.Lp_scaffold_891G24 Lolium perenne HOM05M005811 ORTHO05M006957 3.4e-40 167.2 87 100.0
V3.Lp_chr7_0.1G8376 Lolium perenne HOM05M005811 ORTHO05M006957 2.9e-39 164.1 87 98.9
V3.Lp_chr3_0G21798 Lolium perenne HOM05M005811 ORTHO05M006957 2.4e-38 161.0 87 96.6
TRITD2Av1G120630 Triticum turgidum HOM05M005811 ORTHO05M008014 2.8e-34 147.5 80 92.5
Glyma.09G164000 Glycine max HOM05M005811 ORTHO05M006957 2.7e-21 104.4 83 67.5
Pahal.9G361800 Panicum hallii HOM05M005811 ORTHO05M006957 2.1e-18 94.7 59 83.1
Pahal.9G287200 Panicum hallii HOM05M005811 ORTHO05M006957 2.8e-18 94.4 61 82.0
Pahal.9G286600 Panicum hallii HOM05M005811 ORTHO05M006957 4.8e-18 93.6 59 83.1
Pahal.1G216400 Panicum hallii HOM05M005811 ORTHO05M006957 1.4e-17 92.0 59 83.1
Seita.J017000 Setaria italica HOM05M005811 ORTHO05M006957 1.4e-17 92.0 51 92.2
OsKitaake01g066156 Oryza sativa Kitaake HOM05M005811 ORTHO05M006957 6.4e-15 83.2 59 81.4
OsKitaake03g158500 Oryza sativa Kitaake HOM05M005811 ORTHO05M006957 6.4e-15 83.2 59 81.4
OsKitaake03g352600 Oryza sativa Kitaake HOM05M005811 ORTHO05M006957 6.4e-15 83.2 59 81.4
OsKitaake04g084420 Oryza sativa Kitaake HOM05M005811 ORTHO05M006957 6.4e-15 83.2 59 81.4
OsKitaake08g086600 Oryza sativa Kitaake HOM05M005811 ORTHO05M006957 6.4e-15 83.2 59 81.4
OsKitaake10g165804 Oryza sativa Kitaake HOM05M005811 ORTHO05M006957 6.4e-15 83.2 59 81.4
OsKitaake10g166000 Oryza sativa Kitaake HOM05M005811 ORTHO05M006957 6.4e-15 83.2 59 81.4
OsKitaakeM051105 Oryza sativa Kitaake HOM05M005811 ORTHO05M006957 6.4e-15 83.2 59 81.4
Pahal.6G182100 Panicum hallii HOM05M005811 ORTHO05M006957 1.4e-14 82.0 59 74.6
Asa0G00283 Allium sativum HOM05M005811 ORTHO05M006957 3.2e-14 80.9 58 75.9
Asa0G04582 Allium sativum HOM05M005811 ORTHO05M006957 3.2e-14 80.9 58 75.9
Asa2G01070 Allium sativum HOM05M005811 ORTHO05M006957 3.2e-14 80.9 58 75.9
Asa2G01681 Allium sativum HOM05M005811 ORTHO05M006957 3.2e-14 80.9 58 75.9
Asa3G02279 Allium sativum HOM05M005811 ORTHO05M006957 3.2e-14 80.9 58 75.9
Asa3G04890 Allium sativum HOM05M005811 ORTHO05M006957 3.2e-14 80.9 58 75.9
Asa4G01279 Allium sativum HOM05M005811 ORTHO05M006957 3.2e-14 80.9 58 75.9
Asa5G02987 Allium sativum HOM05M005811 ORTHO05M006957 3.2e-14 80.9 58 75.9
Asa7G04124 Allium sativum HOM05M005811 ORTHO05M006957 3.2e-14 80.9 58 75.9
Asa4G04151 Allium sativum HOM05M005811 ORTHO05M006957 7.1e-14 79.7 58 74.1
OB03G31900 Oryza brachyantha HOM05M000769 ORTHO05M000727 7.1e-14 79.7 37 100.0
Asa3G00843 Allium sativum HOM05M005811 ORTHO05M006957 9.3e-14 79.3 58 74.1
Glyma.03G084500 Glycine max HOM05M005811 ORTHO05M006957 2.1e-13 78.2 71 64.8
Asa5G01437 Allium sativum HOM05M005811 ORTHO05M006957 2.7e-13 77.8 58 74.1
Asa6G02231 Allium sativum HOM05M005811 ORTHO05M006957 2.7e-13 77.8 58 74.1
V3.Lp_chr7_0.1G4868 Lolium perenne HOM05M005811 ORTHO05M006957 2.5e-11 71.2 33 100.0
OsKitaake03g297499 Oryza sativa Kitaake HOM05M005811 ORTHO05M006957 2.1e-10 68.2 44 81.8
Ot_Chr7_gn38083 Oropetium thomaeum HOM05M005811 ORTHO05M006957 4.8e-10 67.0 49 79.6
Ot_Un136_gn40119 Oropetium thomaeum HOM05M005811 ORTHO05M006957 1.8e-09 65.1 49 77.6
Ot_Un136_gn40135 Oropetium thomaeum HOM05M005811 ORTHO05M006957 1.8e-09 65.1 49 77.6
Ot_Un168_gn40535 Oropetium thomaeum HOM05M005811 ORTHO05M006957 1.8e-09 65.1 49 77.6
Ot_Un169_gn40634 Oropetium thomaeum HOM05M005811 ORTHO05M006957 1.8e-09 65.1 49 77.6
Ot_Un171_gn40682 Oropetium thomaeum HOM05M005811 ORTHO05M006957 1.8e-09 65.1 49 77.6
Ot_Un3_gn40888 Oropetium thomaeum HOM05M005811 ORTHO05M006957 1.8e-09 65.1 49 77.6
Ot_Un3_gn40898 Oropetium thomaeum HOM05M005811 ORTHO05M006957 1.8e-09 65.1 49 77.6
Ot_Un9_gn41197 Oropetium thomaeum HOM05M005811 ORTHO05M006957 1.8e-09 65.1 49 77.6
Ot_Un9_gn41201 Oropetium thomaeum HOM05M005811 ORTHO05M006957 1.8e-09 65.1 49 77.6
Glyma.09G133950 Glycine max HOM05M005811 ORTHO05M006957 3.4e-08 60.8 61 52.5
Ot_Chr7_gn37895 Oropetium thomaeum HOM05M005811 ORTHO05M006957 3.4e-08 60.8 28 96.4
Asa2G02348 Allium sativum HOM05M001368 ORTHO05M000884 6.4e-07 56.6 27 96.3
Asa3G00726 Allium sativum HOM05M005811 ORTHO05M006957 1.4e-06 55.5 57 59.6
AT2G07706 Arabidopsis thaliana HOM05M031454 ORTHO05M006957 5.5e-06 53.5 27 92.6
Asa2G05984 Allium sativum HOM05M005811 ORTHO05M006957 7.1e-06 53.1 50 60.0


User provided reference genes

Program Settings