Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GWHGAORA003698 Cenchrus purpureus HOM05M002569 ORTHO05M008630 2.0e-27 124.4 69 100.0
GWHGAORA051841 Cenchrus purpureus HOM05M002569 ORTHO05M008630 2.0e-27 124.4 69 100.0
Horvu_MOREX_Un01G108400 Hordeum vulgare HOM05M002569 ORTHO05M008630 2.0e-27 124.4 69 100.0
V3.Lp_chr7_0.1G1218 Lolium perenne HOM05M002569 ORTHO05M008630 2.0e-27 124.4 69 100.0
V3.Lp_scaffold_4559G16 Lolium perenne HOM05M002569 ORTHO05M008630 2.0e-27 124.4 69 100.0
V3.Lp_scaffold_4807G12 Lolium perenne HOM05M002569 ORTHO05M008630 2.0e-27 124.4 69 100.0
V3.Lp_scaffold_5331G2 Lolium perenne HOM05M002569 ORTHO05M008630 2.0e-27 124.4 69 100.0
V3.Lp_scaffold_891G8 Lolium perenne HOM05M002569 ORTHO05M008630 2.0e-27 124.4 69 100.0
OsKitaake06g253000 Oryza sativa Kitaake HOM05M002569 ORTHO05M008630 2.0e-27 124.4 69 100.0
OsKitaake07g110800 Oryza sativa Kitaake HOM05M002569 ORTHO05M008630 2.0e-27 124.4 69 100.0
OsKitaake10g165812 Oryza sativa Kitaake HOM05M002569 ORTHO05M008630 2.0e-27 124.4 69 100.0
OsKitaake10g165830 Oryza sativa Kitaake HOM05M002569 ORTHO05M008630 2.0e-27 124.4 69 100.0
OsR498G1018217600.01 Oryza sativa ssp. indica HOM05M002569 ORTHO05M008630 2.0e-27 124.4 69 100.0
Pahal.3G033800 Panicum hallii HOM05M002569 ORTHO05M008630 2.0e-27 124.4 69 100.0
GWHGASIY019872 Secale cereale HOM05M002569 ORTHO05M008630 2.0e-27 124.4 69 100.0
Sobic.008G160300 Sorghum bicolor HOM05M002569 ORTHO05M008630 2.0e-27 124.4 69 100.0
TraesCS2D03G0156300 Triticum aestivum HOM05M002569 ORTHO05M008630 2.0e-27 124.4 69 100.0
TraesCS4B03G0000100 Triticum aestivum HOM05M002569 ORTHO05M008630 2.0e-27 124.4 69 100.0
TraesCS5B03G0613800 Triticum aestivum HOM05M002569 ORTHO05M008630 2.0e-27 124.4 69 100.0
TraesCSU03G0449500 Triticum aestivum HOM05M002569 ORTHO05M008630 2.0e-27 124.4 69 100.0
TRIDC3AG071570 Triticum dicoccoides HOM05M002569 ORTHO05M008630 2.0e-27 124.4 69 100.0
TRIDC3BG002760 Triticum dicoccoides HOM05M002569 ORTHO05M008630 2.0e-27 124.4 69 100.0
TRIDC7BG017850 Triticum dicoccoides HOM05M002569 ORTHO05M008630 2.0e-27 124.4 69 100.0
Zm00007a00022332 Zea mays B104 HOM05M002569 ORTHO05M006849 2.0e-27 124.4 69 100.0
TRIDC4AG024270 Triticum dicoccoides HOM05M002569 ORTHO05M008630 9.9e-27 122.1 69 98.6
Bradi2g03106 Brachypodium distachyon HOM05M002569 ORTHO05M008630 1.3e-26 121.7 69 98.6
TraesCS1B03G1091000 Triticum aestivum HOM05M002569 ORTHO05M008630 1.3e-26 121.7 69 97.1
TRIDC5BG041160 Triticum dicoccoides HOM05M002569 ORTHO05M008630 1.3e-26 121.7 69 98.6
Bradi5g06782 Brachypodium distachyon HOM05M002569 ORTHO05M008630 1.7e-26 121.3 69 98.6
TraesCS7D03G0577500 Triticum aestivum HOM05M002569 ORTHO05M008630 1.7e-26 121.3 69 98.6
TraesCS7D03G0577600 Triticum aestivum HOM05M002569 ORTHO05M008630 1.7e-26 121.3 69 98.6
TraesCS3A03G0999700 Triticum aestivum HOM05M002569 ORTHO05M008630 6.4e-26 119.4 69 97.1
TRITD3Av1G245770 Triticum turgidum HOM05M002569 ORTHO05M008630 6.4e-26 119.4 69 97.1
TraesCS5B03G0640800 Triticum aestivum HOM05M002569 ORTHO05M008630 8.4e-26 119.0 69 95.7
TRITD5Bv1G141940 Triticum turgidum HOM05M002569 ORTHO05M008630 8.4e-26 119.0 69 95.7
Seita.8G120700 Setaria italica HOM05M002569 ORTHO05M008630 1.1e-25 118.6 66 100.0
AET1Gv20406600 Aegilops tauschii HOM05M002569 ORTHO05M008630 1.9e-25 117.9 68 97.1
TRIDC3AG060910 Triticum dicoccoides HOM05M002569 ORTHO05M008630 5.4e-25 116.3 69 95.7
Ot_Un136_gn40115 Oropetium thomaeum HOM05M002569 ORTHO05M008630 9.3e-25 115.5 68 95.6
Ot_Un168_gn40558 Oropetium thomaeum HOM05M002569 ORTHO05M008630 9.3e-25 115.5 68 95.6
Ot_Un3_gn40883 Oropetium thomaeum HOM05M002569 ORTHO05M008630 9.3e-25 115.5 68 95.6
Ot_Un9_gn41193 Oropetium thomaeum HOM05M002569 ORTHO05M008630 9.3e-25 115.5 68 95.6
TraesCS2B03G1570000 Triticum aestivum HOM05M002569 ORTHO05M008630 2.7e-24 114.0 69 92.8
Horvu_MOREX_2H01G331300 Hordeum vulgare HOM05M002569 ORTHO05M008630 1.3e-23 111.7 68 92.6
TraesCS7A03G0699600 Triticum aestivum HOM05M002569 ORTHO05M008630 1.3e-23 111.7 69 91.3
TraesCS3B03G1133500 Triticum aestivum HOM05M002569 ORTHO05M008630 3.9e-23 110.2 69 91.3
Aco030998 Ananas comosus HOM05M001115 ORTHO05M005454 1.1e-22 108.6 65 86.2
OsKitaake02g154300 Oryza sativa Kitaake HOM05M002569 ORTHO05M008630 1.1e-22 108.6 62 98.4
TRIDC7AG039750 Triticum dicoccoides HOM05M002569 ORTHO05M008630 1.9e-22 107.8 69 88.4
TRITD3Bv1G075940 Triticum turgidum HOM05M002569 ORTHO05M007587 2.5e-22 107.5 66 92.4
MBI10_g47590_MAGBIO Magnolia biondii HOM05M001115 ORTHO05M005454 4.3e-22 106.7 66 86.4
MBI10_g47593_MAGBIO Magnolia biondii HOM05M001115 ORTHO05M005454 4.3e-22 106.7 66 86.4
Bradi1g05760 Brachypodium distachyon HOM05M002569 ORTHO05M008630 5.6e-22 106.3 69 91.3
TRITD1Bv1G042870 Triticum turgidum HOM05M007431 ORTHO05M007587 7.3e-22 105.9 66 90.9
V3.Lp_chr7_0.1G1238 Lolium perenne HOM05M002569 ORTHO05M008630 9.6e-22 105.5 59 100.0
Aco020234 Ananas comosus HOM05M002569 ORTHO05M006849 1.6e-21 104.8 63 85.7
Aco030031 Ananas comosus HOM05M002569 ORTHO05M006849 1.6e-21 104.8 63 85.7
Aco030531 Ananas comosus HOM05M002569 ORTHO05M006849 1.6e-21 104.8 63 85.7
SEGI_22361 Sequoiadendron giganteum HOM05M002569 ORTHO05M008630 2.8e-21 104.0 69 79.7
ATCG01070 Arabidopsis thaliana HOM05M002569 ORTHO05M008630 3.6e-21 103.6 69 78.3
TRIDC2AG053250 Triticum dicoccoides HOM05M002569 ORTHO05M008630 2.6e-19 97.4 54 100.0
TRITD7Av1G134840 Triticum turgidum HOM05M002569 ORTHO05M008630 7.6e-19 95.9 59 91.5
TRITD3Bv1G234110 Triticum turgidum HOM05M002569 ORTHO05M008630 4.2e-17 90.1 60 86.7
MBI16_g21734_MAGBIO Magnolia biondii HOM05M002569 ORTHO05M008630 3.7e-13 77.0 52 78.8
GWHGAORA064610 Cenchrus purpureus HOM05M002569 ORTHO05M008630 1.8e-12 74.7 55 76.4
Horvu_MOREX_3H01G177300 Hordeum vulgare HOM05M002569 ORTHO05M008630 1.8e-12 74.7 52 80.8
AET0Gv20058900 Aegilops tauschii HOM05M002569 ORTHO05M008630 6.9e-12 72.8 51 80.4
Ot_Un171_gn40701 Oropetium thomaeum HOM05M002569 ORTHO05M008630 1.2e-11 72.0 40 97.5
Sobic.007G133500 Sorghum bicolor HOM05M002569 ORTHO05M008630 2.0e-11 71.2 39 100.0
Ot_Chr5_gn36167 Oropetium thomaeum HOM05M002569 ORTHO05M008630 3.4e-11 70.5 69 66.7
Glyma.18G155400 Glycine max HOM05M002569 ORTHO05M008630 2.5e-06 54.3 51 60.8


User provided reference genes

Program Settings