Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
V3.Lp_chr4_0G4232 Lolium perenne HOM05M000666 ORTHO05M003369 1.2e-139 499.2 280 100.0
Horvu_MOREX_5H01G606000 Hordeum vulgare HOM05M000666 ORTHO05M003369 1.4e-106 389.4 264 83.0
TraesCS5A03G1005900 Triticum aestivum HOM05M000666 ORTHO05M003369 1.3e-104 382.9 264 82.2
TRITD5Av1G214980 Triticum turgidum HOM05M000666 ORTHO05M003369 1.3e-104 382.9 264 82.2
GWHGASIY028680 Secale cereale HOM05M000666 ORTHO05M003369 1.7e-104 382.5 264 81.4
TRIDC5AG061340 Triticum dicoccoides HOM05M000666 ORTHO05M003369 3.7e-104 381.3 264 81.8
GWHGASIY028695 Secale cereale HOM05M000666 ORTHO05M003369 1.1e-103 379.8 264 83.3
GWHGASIY028668 Secale cereale HOM05M000666 ORTHO05M003369 5.3e-103 377.5 262 82.4
AET5Gv20989500 Aegilops tauschii HOM05M000666 ORTHO05M003369 1.1e-100 369.8 264 79.9
TraesCS5D03G0952500 Triticum aestivum HOM05M000666 ORTHO05M003369 1.1e-100 369.8 264 79.9
TRITD5Bv1G211500 Triticum turgidum HOM05M000666 ORTHO05M003369 4.2e-100 367.9 264 78.8
Bradi1g06440 Brachypodium distachyon HOM05M000666 ORTHO05M003369 1.4e-98 362.8 273 76.6
OsKitaake03g365800 Oryza sativa Kitaake HOM05M000666 ORTHO05M003369 5.2e-90 334.3 269 72.5
Os03g0786000 Oryza sativa ssp. japonica HOM05M000666 ORTHO05M003369 5.2e-90 334.3 269 72.5
GWHGAZTO027020 Oryza alta HOM05M000666 ORTHO05M000976 2.2e-88 328.9 269 71.7
GWHGAZTO076901 Oryza alta HOM05M000666 ORTHO05M000976 5.3e-87 324.3 269 70.3
PH02Gene15207 Phyllostachys edulis HOM05M000666 ORTHO05M003369 5.0e-85 317.8 268 68.7
Pahal.9G060700 Panicum hallii HOM05M000666 ORTHO05M003369 1.0e-82 310.1 268 66.4
GWHGAORA050678 Cenchrus purpureus HOM05M000666 ORTHO05M003369 6.7e-82 307.4 268 66.0
Sspon.01G0029740-1A Saccharum spontaneum HOM05M000666 ORTHO05M003369 6.7e-82 307.4 268 68.3
Sspon.01G0029740-3D Saccharum spontaneum HOM05M000666 ORTHO05M003369 5.7e-81 304.3 268 68.7
GWHGAORA019890 Cenchrus purpureus HOM05M000666 ORTHO05M003369 2.2e-80 302.4 269 67.3
Misin01G058400 Miscanthus sinensis HOM05M000666 ORTHO05M003369 2.2e-80 302.4 268 65.7
Sspon.01G0029740-1P Saccharum spontaneum HOM05M000666 ORTHO05M003369 2.8e-80 302.0 269 68.4
OB03G43500 Oryza brachyantha HOM05M000666 ORTHO05M003369 3.7e-80 301.6 267 66.7
Zjn_sc00014.1.g06670.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM05M000666 ORTHO05M003369 6.3e-80 300.8 276 59.8
EJB05_04163 Eragrostis curvula HOM05M000666 ORTHO05M003369 2.4e-79 298.9 262 66.0
EJB05_04176 Eragrostis curvula HOM05M000666 ORTHO05M003369 4.1e-79 298.1 262 66.8
Zm00001eb059960 Zea mays B73 HOM05M000666 ORTHO05M003369 1.6e-78 296.2 269 65.1
Zm00007a00050039 Zea mays B104 HOM05M000666 ORTHO05M003369 2.0e-78 295.8 269 65.1
Zjn_sc00013.1.g06360.1.cf.mkhc Zoysia japonica ssp. nagirizaki HOM05M000666 ORTHO05M003369 2.0e-78 295.8 270 61.1
Seita.9G064300 Setaria italica HOM05M000666 ORTHO05M003369 2.7e-78 295.4 268 65.7
Sevir.9G063700 Setaria viridis HOM05M000666 ORTHO05M003369 2.7e-78 295.4 268 65.7
Dexi9B01G0005870 Digitaria exilis HOM05M000666 ORTHO05M003369 1.0e-77 293.5 269 65.1
Ot_Chr4_g07792 Oropetium thomaeum HOM05M000666 ORTHO05M003369 5.5e-76 287.7 273 61.9
PH02Gene09642 Phyllostachys edulis HOM05M000666 ORTHO05M003369 5.7e-73 277.7 281 60.9
OB07G12520 Oryza brachyantha HOM05M000666 ORTHO05M003369 2.8e-72 275.4 276 62.3
GWHGAZTO089764 Oryza alta HOM05M000666 ORTHO05M003369 6.3e-72 274.2 279 63.1
MisinT144800 Miscanthus sinensis HOM05M000666 ORTHO05M003369 1.8e-71 272.7 269 65.1
OsKitaake07g036000 Oryza sativa Kitaake HOM05M000666 ORTHO05M003369 2.4e-71 272.3 277 63.5
OsR498G0713533300.01 Oryza sativa ssp. indica HOM05M000666 ORTHO05M003369 2.4e-71 272.3 277 63.5
Os07g0152800 Oryza sativa ssp. japonica HOM05M000666 ORTHO05M003369 2.4e-71 272.3 277 63.5
Horvu_MOREX_2H01G361400 Hordeum vulgare HOM05M000666 ORTHO05M003369 4.1e-71 271.6 285 59.3
PH02Gene08285 Phyllostachys edulis HOM05M000666 ORTHO05M003369 1.2e-70 270.0 269 63.9
GWHGASIY001588 Secale cereale HOM05M000666 ORTHO05M003369 1.9e-68 262.7 273 62.6
GWHGASIY008291 Secale cereale HOM05M000666 ORTHO05M003369 1.9e-68 262.7 273 62.6
TraesCS2B03G0679200 Triticum aestivum HOM05M000666 ORTHO05M003369 2.5e-68 262.3 275 62.2
TRITD2Bv1G119080 Triticum turgidum HOM05M000666 ORTHO05M003369 2.5e-68 262.3 275 62.2
Sspon.02G0024010-1A Saccharum spontaneum HOM05M000666 ORTHO05M003369 2.8e-67 258.8 294 59.9
TraesCS2D03G0580800 Triticum aestivum HOM05M000666 ORTHO05M003369 4.7e-67 258.1 290 57.2
TRIDC5BG065500 Triticum dicoccoides HOM05M000666 ORTHO05M003369 1.4e-66 256.5 194 78.9
TraesCS2A03G0604000 Triticum aestivum HOM05M000666 ORTHO05M003369 1.8e-66 256.1 290 56.9
Dexi2A01G0003180 Digitaria exilis HOM05M000666 ORTHO05M003369 2.3e-66 255.8 269 61.0
Dexi2B01G0002950 Digitaria exilis HOM05M000666 ORTHO05M003369 2.3e-66 255.8 269 61.0
Zm00007a00039281 Zea mays B104 HOM05M000666 ORTHO05M003369 2.3e-66 255.8 271 63.1
Zm00001eb117520 Zea mays B73 HOM05M000666 ORTHO05M003369 3.0e-66 255.4 272 63.6
TRITD2Av1G136240 Triticum turgidum HOM05M000666 ORTHO05M003369 4.0e-66 255.0 290 56.6
TRIDC2AG033190 Triticum dicoccoides HOM05M000666 ORTHO05M003369 5.2e-66 254.6 290 56.6
Misin04G029800 Miscanthus sinensis HOM05M000666 ORTHO05M003369 6.8e-66 254.2 274 63.1
Bradi1g58470 Brachypodium distachyon HOM05M000666 ORTHO05M003369 1.5e-65 253.1 281 59.8
DexiUA01G0005690 Digitaria exilis HOM05M000666 ORTHO05M003369 1.5e-65 253.1 269 63.2
Pahal.2G027000 Panicum hallii HOM05M000666 ORTHO05M003369 1.5e-65 253.1 277 61.0
Sobic.002G035900 Sorghum bicolor HOM05M000666 ORTHO05M003369 7.5e-65 250.8 272 61.8
Sspon.01G0029740-3P Saccharum spontaneum HOM05M000666 ORTHO05M003369 1.3e-64 250.0 273 61.9
EJB05_14908 Eragrostis curvula HOM05M000666 ORTHO05M003369 2.2e-64 249.2 274 60.9
Sspon.01G0029740-2B Saccharum spontaneum HOM05M000666 ORTHO05M003369 3.7e-64 248.4 218 68.8
GWHGAORA046691 Cenchrus purpureus HOM05M000666 ORTHO05M003369 8.3e-64 247.3 274 62.0
Aco005107 Ananas comosus HOM05M000666 ORTHO05M000976 1.2e-62 243.4 259 58.7
Ot_Chr7_g26964 Oropetium thomaeum HOM05M000666 ORTHO05M003369 4.5e-62 241.5 278 55.8
Sspon.01G0029740-2P Saccharum spontaneum HOM05M000666 ORTHO05M003369 1.1e-60 236.9 268 59.3
evm.TU.AsparagusV1_07.3429.V1.1 Asparagus officinalis HOM05M000666 ORTHO05M003369 1.2e-59 233.4 280 56.1
GWHGAORA010066 Cenchrus purpureus HOM05M000666 ORTHO05M003369 6.1e-59 231.1 273 59.3
Seita.2G034300 Setaria italica HOM05M000666 ORTHO05M003369 9.8e-57 223.8 286 53.5
Ma02_g19100 Musa acuminata HOM05M000666 ORTHO05M003369 1.7e-56 223.0 275 50.9
Sspon.02G0024010-3C Saccharum spontaneum HOM05M000666 ORTHO05M003369 2.2e-56 222.6 310 54.2
Sevir.2G038900 Setaria viridis HOM05M000666 ORTHO05M003369 2.2e-56 222.6 286 53.1
p5.00_sc00026_p0051 Elaeis guineensis HOM05M000666 ORTHO05M003369 1.4e-55 219.9 289 50.2
Sobic.001G065700 Sorghum bicolor HOM05M000666 ORTHO05M003369 3.2e-55 218.8 266 59.0
Glyma.15G027800 Glycine max HOM05M000666 ORTHO05M003369 4.1e-55 218.4 293 52.6
Aco008726 Ananas comosus HOM05M000666 ORTHO05M003369 2.7e-54 215.7 268 52.6
p5.00_sc00117_p0032 Elaeis guineensis HOM05M000666 ORTHO05M003369 3.5e-54 215.3 268 50.4
Solyc06g007700.4 Solanum lycopersicum HOM05M000666 ORTHO05M003369 1.0e-53 213.8 275 57.1
Glyma.13G346400 Glycine max HOM05M000666 ORTHO05M003369 1.3e-53 213.4 296 50.7
Asa1G04611 Allium sativum HOM05M000666 ORTHO05M003369 8.6e-53 210.7 284 52.8
CALSI_Maker00039124 Calamus simplicifolius HOM05M000666 ORTHO05M003369 8.6e-53 210.7 275 48.0
Ma05_g02470 Musa acuminata HOM05M000666 ORTHO05M003369 2.5e-52 209.1 269 53.5
Glyma.11G125400 Glycine max HOM05M000666 ORTHO05M003369 4.3e-52 208.4 275 52.7
Spipo32G0010800 Spirodela polyrhiza HOM05M000666 ORTHO05M003369 4.3e-52 208.4 287 47.7
CALSI_Maker00040641 Calamus simplicifolius HOM05M000666 ORTHO05M003369 9.5e-52 207.2 288 48.3
CDE02G4798 Ceratophyllum demersum HOM05M000666 ORTHO05M003369 4.7e-51 204.9 274 55.8
Potri.017G018400 Populus trichocarpa HOM05M000666 ORTHO05M003369 1.1e-50 203.8 292 49.7
CDE05G3137 Ceratophyllum demersum HOM05M000666 ORTHO05M003369 4.4e-49 198.4 274 51.8
Sspon.02G0024010-2B Saccharum spontaneum HOM05M000666 ORTHO05M003369 7.5e-49 197.6 277 54.9
Asa4G06094 Allium sativum HOM05M000666 ORTHO05M003369 9.8e-49 197.2 287 48.8
p5.00_sc02522_p0001 Elaeis guineensis HOM05M000666 ORTHO05M003369 2.2e-48 196.1 276 47.8
GWHGAZTO042077 Oryza alta HOM05M000666 ORTHO05M003369 2.9e-48 195.7 213 61.0
HPP92_015668 Vanilla planifolia HOM05M000666 ORTHO05M003369 2.9e-48 195.7 271 54.6
EJB05_50376 Eragrostis curvula HOM05M000666 ORTHO05M003369 4.9e-48 194.9 274 54.7
ATR0752G090 Amborella trichopoda HOM05M000666 ORTHO05M003369 8.3e-48 194.1 281 51.6
DDU739G0112 Dioscorea dumetorum HOM05M000666 ORTHO05M003369 1.1e-47 193.7 294 47.6
SEGI_01562 Sequoiadendron giganteum HOM05M000666 ORTHO05M003369 4.1e-47 191.8 299 47.8
MBI02_g24302_MAGBIO Magnolia biondii HOM05M000666 ORTHO05M003369 1.1e-44 183.7 304 47.7
AT3G07560 Arabidopsis thaliana HOM05M000666 ORTHO05M003369 2.8e-43 179.1 284 48.6
SEGI_07594 Sequoiadendron giganteum HOM05M000666 ORTHO05M003369 8.1e-43 177.6 298 42.3
Potri.014G197200 Populus trichocarpa HOM05M000666 ORTHO05M003369 1.4e-39 166.8 287 48.4
CALSI_Maker00045158 Calamus simplicifolius HOM05M000666 ORTHO05M003369 2.4e-39 166.0 310 43.2
Zosma06g20600 Zostera marina HOM05M000666 ORTHO05M003369 3.0e-37 159.1 298 49.7
Aco003544 Ananas comosus HOM05M000666 ORTHO05M003369 2.1e-35 152.9 261 38.7
MBI18_g24478_MAGBIO Magnolia biondii HOM05M000666 ORTHO05M003369 6.0e-30 134.8 250 42.0
GWHGAORA019932 Cenchrus purpureus HOM05M000666 ORTHO05M000976 8.7e-29 131.0 90 72.2
Mapoly0080s0067 Marchantia polymorpha HOM05M000666 ORTHO05M003369 3.3e-28 129.0 315 41.0
SMO146G0020 Selaginella moellendorffii HOM05M000666 ORTHO05M003369 5.6e-28 128.3 300 38.0
CALSI_Maker00038902 Calamus simplicifolius HOM05M000666 ORTHO05M003369 8.1e-27 124.4 118 53.4
Asa1G04613 Allium sativum HOM05M000666 ORTHO05M003369 1.4e-26 123.6 116 58.6
AagrBONN_evm.TU.Sc2ySwM_368.3329 Anthoceros agrestis HOM05M000666 ORTHO05M003369 3.1e-26 122.5 279 39.4
Dexi9A01G0006150 Digitaria exilis HOM05M000666 ORTHO05M003369 7.6e-25 117.9 124 50.8
Pp3c11_19790 Physcomitrium patens HOM05M000666 ORTHO05M003369 3.2e-23 112.5 295 42.4
CBR_g38951 Chara braunii HOM05M000666 ORTHO05M003369 1.3e-21 107.1 312 39.7
p5.00_sc00114_p0002 Elaeis guineensis HOM05M000666 ORTHO05M003369 9.9e-17 90.9 225 32.0
Asa1G04612 Allium sativum HOM05M000666 ORTHO05M003369 3.9e-13 79.0 94 58.5
SEGI_40649 Sequoiadendron giganteum HOM05M000666 ORTHO05M003369 3.3e-12 75.9 88 48.9
MCO15G241 Micromonas commoda HOM05M000666 ORTHO05M003369 3.7e-11 72.4 307 33.9
Cre13.g574700 Chlamydomonas reinhardtii HOM05M000666 ORTHO05M003369 4.8e-11 72.0 62 51.6
DDU506G0153 Dioscorea dumetorum HOM05M000183 ORTHO05M000412 4.8e-11 72.0 68 54.4
SEGI_02285 Sequoiadendron giganteum HOM05M000666 ORTHO05M003369 5.3e-10 68.6 117 44.4
TRIDC5BG065510 Triticum dicoccoides HOM05M000666 ORTHO05M003369 9.0e-10 67.8 39 74.4
Ma04_g38070 Musa acuminata HOM05M000666 ORTHO05M003369 1.3e-08 63.9 60 53.3
Zm00007a00013592 Zea mays B104 HOM05M000666 ORTHO05M004719 8.4e-08 61.2 48 70.8
CBR_g50337 Chara braunii HOM05M000666 ORTHO05M003369 1.1e-07 60.8 263 37.6
Zm00007a00027004 Zea mays B104 HOM05M000081 ORTHO05M002226 1.4e-07 60.5 44 70.5
Zm00001eb392350 Zea mays B73 HOM05M000081 ORTHO05M002226 3.2e-07 59.3 44 72.7
Zm00007a00024747 Zea mays B104 HOM05M000081 ORTHO05M002226 3.2e-07 59.3 44 72.7
SEGI_25865 Sequoiadendron giganteum HOM05M000018 ORTHO05M003369 2.1e-06 56.6 79 43.0

Aegilops tauschii (1 genes)
Allium sativum (4 genes)
Amborella trichopoda (1 genes)
Ananas comosus (3 genes)
Anthoceros agrestis (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (4 genes)
Cenchrus purpureus (5 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (2 genes)
Chlamydomonas reinhardtii (1 genes)
Digitaria exilis (5 genes)
Dioscorea dumetorum (2 genes)
Elaeis guineensis (4 genes)
Eragrostis curvula (4 genes)
Glycine max (3 genes)
Hordeum vulgare (2 genes)
Lolium perenne (1 genes)
Magnolia biondii (2 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (2 genes)
Oryza alta (4 genes)
Oryza brachyantha (2 genes)
Oryza sativa Kitaake (2 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (2 genes)
Panicum hallii (2 genes)
Phyllostachys edulis (3 genes)
Physcomitrium patens (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (9 genes)
Secale cereale (5 genes)
Selaginella moellendorffii (1 genes)
Sequoiadendron giganteum (5 genes)
Setaria italica (2 genes)
Setaria viridis (2 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (5 genes)
Triticum dicoccoides (4 genes)
Triticum turgidum (4 genes)
Vanilla planifolia (1 genes)
Zea mays B73 (3 genes)
Zea mays B104 (5 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings