Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
V3.Lp_chr3_0G9968 Lolium perenne HOM05M000524 ORTHO05M003374 8.5e-102 372.9 183 100.0
Seita.J010400 Setaria italica HOM05M000524 ORTHO05M003374 1.9e-93 345.1 190 90.0
Sevir.1G145580 Setaria viridis HOM05M000524 ORTHO05M003374 1.9e-93 345.1 190 90.0
AET4Gv20044600 Aegilops tauschii HOM05M000524 ORTHO05M003374 5.6e-93 343.6 188 91.0
GWHGAORA007935 Cenchrus purpureus HOM05M000524 ORTHO05M003374 9.5e-93 342.8 190 89.5
Ot_Un136_gn40159 Oropetium thomaeum HOM05M000524 ORTHO05M003374 1.6e-92 342.0 187 90.9
Ot_Un168_gn40616 Oropetium thomaeum HOM05M000524 ORTHO05M003374 1.6e-92 342.0 187 90.9
Ot_Un3_gn40916 Oropetium thomaeum HOM05M000524 ORTHO05M003374 1.6e-92 342.0 187 90.9
Bradi1g39227 Brachypodium distachyon HOM05M000524 ORTHO05M003374 2.1e-92 341.7 189 90.5
Bradi4g17461 Brachypodium distachyon HOM05M000524 ORTHO05M003374 6.1e-92 340.1 189 89.9
TRIDC1AG021310 Triticum dicoccoides HOM05M000524 ORTHO05M003374 1.0e-91 339.3 184 91.3
Zm00007a00038935 Zea mays B104 HOM05M000524 ORTHO05M003374 1.3e-89 332.4 190 86.8
Zm00007a00030995 Zea mays B104 HOM05M000524 ORTHO05M002120 8.3e-89 329.7 184 88.0
TRIDC7AG033210 Triticum dicoccoides HOM05M000524 ORTHO05M003374 4.4e-82 307.4 167 91.6
OsKitaake01g355400 Oryza sativa Kitaake HOM05M000524 ORTHO05M003374 4.9e-81 303.9 189 83.6
OsKitaake02g155750 Oryza sativa Kitaake HOM05M000524 ORTHO05M003374 4.9e-81 303.9 189 83.6
OsR498G0305963100.01 Oryza sativa ssp. indica HOM05M000524 ORTHO05M003374 4.9e-81 303.9 189 83.6
Asa0G03917 Allium sativum HOM05M000524 ORTHO05M003374 2.0e-79 298.5 189 78.8
Asa0G04580 Allium sativum HOM05M000524 ORTHO05M003374 2.0e-79 298.5 189 78.8
Bradi5g23815 Brachypodium distachyon HOM05M000524 ORTHO05M003374 3.0e-78 294.7 183 82.5
Asa0G05366 Allium sativum HOM05M000524 ORTHO05M003374 2.1e-76 288.5 189 76.2
HPP92_028443 Vanilla planifolia HOM05M000524 ORTHO05M003374 2.8e-76 288.1 192 74.5
Zosma70g00210 Zostera marina HOM05M000524 ORTHO05M003374 3.6e-76 287.7 184 77.7
ATCG00180 Arabidopsis thaliana HOM05M000524 ORTHO05M003374 3.4e-74 281.2 185 78.4
Potri.013G140850 Populus trichocarpa HOM05M000524 ORTHO05M003374 8.6e-70 266.5 185 74.1
AET3Gv21179700 Aegilops tauschii HOM05M000524 ORTHO05M003374 5.6e-69 263.8 145 90.3
Pahal.3G122800 Panicum hallii HOM05M000524 ORTHO05M003374 1.6e-68 262.3 150 85.3
Zm00007a00029072 Zea mays B104 HOM05M000524 ORTHO05M003374 1.2e-66 256.1 165 79.4
Sspon.02G0049630-1C Saccharum spontaneum HOM05M000524 ORTHO05M003374 1.2e-60 236.1 138 81.2
Misin09G113000 Miscanthus sinensis HOM05M000524 ORTHO05M003374 2.7e-55 218.4 183 65.0
DDU125G0041 Dioscorea dumetorum HOM05M000524 ORTHO05M003374 3.3e-53 211.5 142 76.8
DDU197G0006 Dioscorea dumetorum HOM05M000524 ORTHO05M003374 3.3e-53 211.5 142 76.8
DDU581G0009 Dioscorea dumetorum HOM05M000524 ORTHO05M003374 3.3e-53 211.5 142 76.8
DDU747G0011 Dioscorea dumetorum HOM05M000524 ORTHO05M003374 3.3e-53 211.5 142 76.8
Asa3G05033 Allium sativum HOM05M000524 ORTHO05M003374 4.8e-52 207.6 134 78.4
Asa6G03871 Allium sativum HOM05M000524 ORTHO05M003374 2.0e-50 202.2 137 75.2
SEGI_19449 Sequoiadendron giganteum HOM05M000524 ORTHO05M003374 4.6e-47 191.0 177 59.3
DDU125G0024 Dioscorea dumetorum HOM05M000524 ORTHO05M003374 1.8e-46 189.1 130 76.2
DDU643G0061 Dioscorea dumetorum HOM05M000524 ORTHO05M003374 1.8e-46 189.1 130 76.2
DDU643G0142 Dioscorea dumetorum HOM05M000524 ORTHO05M003374 1.8e-46 189.1 130 76.2
DDU747G0013 Dioscorea dumetorum HOM05M000524 ORTHO05M003374 1.8e-46 189.1 130 76.2
DDU645G0009 Dioscorea dumetorum HOM05M000524 ORTHO05M003374 2.1e-44 182.2 128 75.0
GWHGAORA042021 Cenchrus purpureus HOM05M000524 ORTHO05M003374 1.9e-40 169.1 189 56.6
V3.Lp_chr2_0G17272 Lolium perenne HOM05M000524 ORTHO05M003374 2.1e-39 165.6 80 100.0
SEGI_00207 Sequoiadendron giganteum HOM05M000524 ORTHO05M003374 4.6e-39 164.5 153 59.5
SEGI_37297 Sequoiadendron giganteum HOM05M000524 ORTHO05M003374 1.1e-37 159.8 154 58.4
Sevir.7G109400 Setaria viridis HOM05M000524 ORTHO05M003374 4.0e-35 151.4 148 60.1
Zjn_sc00032.1.g01560.1.cf.mkhc Zoysia japonica ssp. nagirizaki HOM05M000524 ORTHO05M003374 4.6e-31 137.9 68 97.1
SEGI_38258 Sequoiadendron giganteum HOM05M000524 ORTHO05M003374 1.6e-28 129.4 117 59.8
Potri.019G028000 Populus trichocarpa HOM05M000524 ORTHO05M003374 8.2e-28 127.1 89 76.4
AET7Gv20721000 Aegilops tauschii HOM05M000524 ORTHO05M003374 1.0e-25 120.2 60 98.3
DDU690G0007 Dioscorea dumetorum HOM05M000524 ORTHO05M003374 1.4e-24 116.3 60 95.0
SMO086G0006 Selaginella moellendorffii HOM05M000524 ORTHO05M003374 5.5e-24 114.4 182 42.3
Asa0G01067 Allium sativum HOM05M000524 ORTHO05M003374 1.6e-23 112.8 81 71.6
Asa3G05070 Allium sativum HOM05M000524 ORTHO05M003374 1.6e-23 112.8 81 71.6
V3.Lp_chr1_0G14018 Lolium perenne HOM05M000524 ORTHO05M002120 2.1e-23 112.5 59 94.9
Asa6G05956 Allium sativum HOM05M000524 ORTHO05M003374 3.6e-23 111.7 71 80.3
Asa0G00125 Allium sativum HOM05M000524 ORTHO05M003374 6.1e-23 110.9 59 91.5
Solyc01g017470.3 Solanum lycopersicum HOM05M000524 ORTHO05M003374 3.9e-22 108.2 88 69.3
Aco021894 Ananas comosus HOM05M001860 ORTHO05M001856 1.5e-21 106.3 59 89.8
Asa3G00114 Allium sativum HOM05M000524 ORTHO05M003374 1.1e-19 100.1 54 90.7
Solyc00g500052.1 Solanum lycopersicum HOM05M000524 ORTHO05M002120 3.1e-19 98.6 54 90.7
Solyc00g500135.1 Solanum lycopersicum HOM05M000524 ORTHO05M002120 3.1e-19 98.6 54 90.7
Solyc00g500205.1 Solanum lycopersicum HOM05M000524 ORTHO05M002120 3.1e-19 98.6 54 90.7
Solyc00g500319.1 Solanum lycopersicum HOM05M000524 ORTHO05M002120 3.1e-19 98.6 54 90.7
Zm00007a00016140 Zea mays B104 HOM05M000524 ORTHO05M002120 3.8e-17 91.7 45 97.8
Solyc11g062110.1 Solanum lycopersicum HOM05M000524 ORTHO05M003374 3.2e-16 88.6 67 64.2
Ot_Chr3_gn34748 Oropetium thomaeum HOM05M000524 ORTHO05M003374 1.6e-15 86.3 50 86.0
Asa7G03945 Allium sativum HOM05M000524 ORTHO05M003374 2.7e-15 85.5 46 89.1
Solyc07g021220.3 Solanum lycopersicum HOM05M000524 ORTHO05M003374 1.0e-14 83.6 85 54.1
Zm00007a00032337 Zea mays B104 HOM05M000524 ORTHO05M002120 1.3e-12 76.6 45 86.7
AET2Gv20726300 Aegilops tauschii HOM05M005751 ORTHO05M003374 6.5e-09 64.3 42 69.0
Zosma372g00010 Zostera marina HOM05M000524 ORTHO05M002120 9.4e-08 60.5 31 96.8
Asa0G05119 Allium sativum HOM05M000524 ORTHO05M003374 6.1e-07 57.8 33 84.8


User provided reference genes

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