Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
TraesCS3D03G0636700 Triticum aestivum HOM05M000498 ORTHO05M006377 0.0e+00 1415.2 776 100.0
Horvu_MOREX_3H01G424900 Hordeum vulgare HOM05M000498 ORTHO05M006377 0.0e+00 1310.4 771 94.2
AET3Gv20659000 Aegilops tauschii HOM05M000498 ORTHO05M006377 0.0e+00 1290.8 715 100.0
TraesCS3B03G0793100 Triticum aestivum HOM05M000498 ORTHO05M006377 0.0e+00 1271.5 715 98.7
TRIDC3BG046080 Triticum dicoccoides HOM05M000498 ORTHO05M006377 0.0e+00 1265.8 715 98.5
GWHGASIY015816 Secale cereale HOM05M000498 ORTHO05M006377 0.0e+00 1252.7 715 97.5
TraesCS3A03G0695400 Triticum aestivum HOM05M000498 ORTHO05M006377 0.0e+00 1250.0 715 97.1
TRITD3Av1G182150 Triticum turgidum HOM05M000498 ORTHO05M006377 0.0e+00 1234.6 715 96.2
TRITD3Bv1G161780 Triticum turgidum HOM05M000498 ORTHO05M006377 0.0e+00 1200.7 678 98.5
V3.Lp_chr3_0G17316 Lolium perenne HOM05M000498 ORTHO05M006377 0.0e+00 1160.2 715 90.6
Bradi2g49600 Brachypodium distachyon HOM05M000498 ORTHO05M006377 0.0e+00 1114.4 715 87.7
PH02Gene15124 Phyllostachys edulis HOM05M000498 ORTHO05M006377 0.0e+00 1090.9 715 85.6
PH02Gene42345 Phyllostachys edulis HOM05M000498 ORTHO05M006377 5.4e-307 1056.6 720 83.5
OsKitaake01g322000 Oryza sativa Kitaake HOM05M000498 ORTHO05M006377 5.3e-294 1013.4 715 80.4
Os01g0744400 Oryza sativa ssp. japonica HOM05M000498 ORTHO05M006377 5.3e-294 1013.4 715 80.4
OsR498G0101979800.01 Oryza sativa ssp. indica HOM05M000498 ORTHO05M006377 4.5e-293 1010.4 715 80.3
GWHGAZTO057330 Oryza alta HOM05M000498 ORTHO05M006377 5.8e-293 1010.0 715 80.0
OB01G39520 Oryza brachyantha HOM05M000498 ORTHO05M006377 5.8e-293 1010.0 715 80.7
Pahal.5G162500 Panicum hallii HOM05M000498 ORTHO05M006377 2.2e-287 991.5 715 79.4
Misin06G253800 Miscanthus sinensis HOM05M000498 ORTHO05M006377 6.1e-282 973.4 715 77.2
GWHGAZTO005010 Oryza alta HOM05M000498 ORTHO05M006377 9.7e-280 966.1 679 80.7
Misin05G274000 Miscanthus sinensis HOM05M000498 ORTHO05M006377 2.2e-279 964.9 715 76.9
Sobic.003G293000 Sorghum bicolor HOM05M000498 ORTHO05M006377 3.7e-279 964.1 715 76.9
Seita.5G314900 Setaria italica HOM05M000498 ORTHO05M006377 1.1e-278 962.6 717 78.2
Sevir.5G317900 Setaria viridis HOM05M000498 ORTHO05M006377 1.1e-278 962.6 717 78.2
GWHGAORA031622 Cenchrus purpureus HOM05M000498 ORTHO05M006377 1.5e-272 942.2 717 76.3
Ot_Chr3_g12469 Oropetium thomaeum HOM05M000498 ORTHO05M006377 3.3e-272 941.0 715 76.8
Zm00001eb153530 Zea mays B73 HOM05M000498 ORTHO05M006377 2.8e-271 937.9 716 76.0
Zm00001eb371090 Zea mays B73 HOM05M000498 ORTHO05M006377 8.5e-260 899.8 715 73.4
EJB05_17015 Eragrostis curvula HOM05M000498 ORTHO05M006377 3.2e-251 871.3 715 72.4
Zm00007a00038489 Zea mays B104 HOM05M000498 ORTHO05M006377 1.4e-230 802.7 689 70.1
Sspon.03G0006620-1T Saccharum spontaneum HOM05M000498 ORTHO05M006377 3.5e-229 798.1 630 74.6
Sspon.03G0006620-2D Saccharum spontaneum HOM05M000498 ORTHO05M006377 1.1e-227 793.1 630 74.6
Dexi5B01G0026900 Digitaria exilis HOM05M000498 ORTHO05M006377 5.1e-212 741.1 724 64.2
Dexi5A01G0026680 Digitaria exilis HOM05M000498 ORTHO05M006377 4.3e-211 738.0 724 64.0
GWHGAORA044777 Cenchrus purpureus HOM05M000498 ORTHO05M006377 1.6e-210 736.1 641 69.4
p5.00_sc00059_p0048 Elaeis guineensis HOM05M000498 ORTHO05M006377 1.3e-207 726.5 720 62.4
Ma01_g07240 Musa acuminata HOM05M000498 ORTHO05M006377 5.1e-188 661.4 716 59.2
Glyma.16G077500 Glycine max HOM05M000498 ORTHO05M006377 1.9e-174 616.3 727 55.7
Glyma.01G008900 Glycine max HOM05M000498 ORTHO05M006377 5.5e-174 614.8 726 55.4
MBI07_g22518_MAGBIO Magnolia biondii HOM05M000498 ORTHO05M006377 3.0e-172 609.0 729 55.0
Spipo21G0035500 Spirodela polyrhiza HOM05M000498 ORTHO05M006377 5.1e-172 608.2 721 55.6
Solyc12g008390.3 Solanum lycopersicum HOM05M000498 ORTHO05M006377 4.3e-171 605.1 738 55.3
Potri.018G086600 Populus trichocarpa HOM05M000498 ORTHO05M006377 5.7e-171 604.7 721 54.5
Aco005993 Ananas comosus HOM05M000498 ORTHO05M006377 4.5e-168 595.1 630 59.0
Sspon.03G0006620-1A Saccharum spontaneum HOM05M000498 ORTHO05M006377 8.5e-167 590.9 611 62.0
HPP92_005563 Vanilla planifolia HOM05M000498 ORTHO05M006377 1.0e-164 583.9 483 69.2
evm.TU.AsparagusV1_05.2642.V1.1 Asparagus officinalis HOM05M000498 ORTHO05M006377 6.3e-162 574.7 717 53.6
CALSI_Maker00011407 Calamus simplicifolius HOM05M000498 ORTHO05M006377 6.9e-161 571.2 647 55.8
DDU314G0146 Dioscorea dumetorum HOM05M000498 ORTHO05M006377 7.7e-160 567.8 703 54.2
AT2G19950 Arabidopsis thaliana HOM05M000498 ORTHO05M006377 3.9e-156 555.4 719 50.2
Asa1G04179 Allium sativum HOM05M000498 ORTHO05M006377 6.7e-156 554.7 732 50.4
ATR0705G155 Amborella trichopoda HOM05M000498 ORTHO05M006377 8.8e-156 554.3 723 51.7
MBI01_g35400_MAGBIO Magnolia biondii HOM05M000498 ORTHO05M006377 4.1e-145 518.8 823 46.8
TRIDC3AG040850 Triticum dicoccoides HOM05M000498 ORTHO05M006377 4.1e-145 518.8 309 94.2
Zosma05g02410 Zostera marina HOM05M000498 ORTHO05M006377 3.6e-141 505.8 718 48.6
Zjn_sc00029.1.g05570.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M000498 ORTHO05M006377 2.0e-139 500.0 715 49.8
SEGI_40884 Sequoiadendron giganteum HOM05M000498 ORTHO05M006377 2.6e-139 499.6 722 47.1
CDE04G3494 Ceratophyllum demersum HOM05M000498 ORTHO05M006377 4.4e-139 498.8 696 49.0
p5.00_sc00310_p0020 Elaeis guineensis HOM05M000498 ORTHO05M006377 1.1e-113 414.5 719 44.1
AagrBONN_evm.TU.Sc2ySwM_368.430 Anthoceros agrestis HOM05M000498 ORTHO05M006377 2.3e-100 370.2 717 40.7
Zm00007a00041126 Zea mays B104 HOM05M000498 ORTHO05M006377 7.3e-86 322.0 244 75.8
CDE02G0772 Ceratophyllum demersum HOM05M000498 ORTHO05M006377 2.2e-74 283.9 231 67.5
SMO356G0242 Selaginella moellendorffii HOM05M000498 ORTHO05M006377 6.4e-74 282.3 497 42.5
MBI07_g30871_MAGBIO Magnolia biondii HOM05M000498 ORTHO05M006377 1.3e-69 268.1 223 68.2
PH02Gene04346 Phyllostachys edulis HOM05M000498 ORTHO05M006377 6.9e-68 262.3 252 63.1
CALSI_Maker00042354 Calamus simplicifolius HOM05M000498 ORTHO05M006377 4.5e-59 233.0 390 44.1
Potri.006G164350 Populus trichocarpa HOM05M000498 ORTHO05M006377 1.9e-57 227.6 172 71.5
CBR_g39203 Chara braunii HOM05M000498 ORTHO05M006377 2.8e-53 213.8 651 32.9
PH02Gene12010 Phyllostachys edulis HOM05M000498 ORTHO05M006377 7.2e-49 199.1 181 66.3
SMO140G0037 Selaginella moellendorffii HOM05M000498 ORTHO05M006377 4.8e-45 186.4 497 34.0
PH02Gene47550 Phyllostachys edulis HOM05M004299 ORTHO05M005388 1.2e-43 181.8 182 60.4
Zm00007a00008636 Zea mays B104 HOM05M000498 ORTHO05M006377 2.6e-35 154.1 253 47.4
PH02Gene10208 Phyllostachys edulis HOM05M005297 ORTHO05M006631 3.6e-24 117.1 169 49.7
PH02Gene25477 Phyllostachys edulis HOM05M000498 ORTHO05M006377 2.3e-23 114.4 81 82.7
Zm00007a00041124 Zea mays B104 HOM05M000498 ORTHO05M006377 5.2e-23 113.2 74 81.1
PH02Gene51379 Phyllostachys edulis HOM05M000498 ORTHO05M006377 1.3e-18 98.6 64 85.9
HPP92_005577 Vanilla planifolia HOM05M000498 ORTHO05M006377 3.0e-15 87.4 77 64.9
Cre12.g517500 Chlamydomonas reinhardtii HOM05M000498 ORTHO05M006377 1.3e-13 82.0 444 24.8
PH02Gene26652 Phyllostachys edulis HOM05M000004 ORTHO05M000008 8.3e-13 79.3 102 58.8
PH02Gene16015 Phyllostachys edulis HOM05M000078 ORTHO05M000059 1.2e-11 75.5 46 87.0
PH02Gene39623 Phyllostachys edulis HOM05M003131 ORTHO05M003664 3.8e-10 70.5 37 94.6
PRCOL_00000913 Prasinoderma coloniale HOM05M000498 ORTHO05M006377 1.5e-09 68.6 481 24.9
AagrBONN_evm.TU.Sc2ySwM_344.4779 Anthoceros agrestis HOM05M005526 ORTHO05M006459 9.5e-09 65.9 356 25.6
ATR0693G380 Amborella trichopoda HOM05M000498 ORTHO05M006377 4.7e-08 63.5 70 55.7
PH02Gene33650 Phyllostachys edulis HOM05M005526 ORTHO05M006459 8.0e-08 62.8 321 27.1
PH02Gene25470 Phyllostachys edulis HOM05M001108 ORTHO05M000421 2.3e-07 61.2 113 39.8
Pp3c2_5550 Physcomitrium patens HOM05M005526 ORTHO05M006459 6.8e-07 59.7 341 24.9
MBI12_g30398_MAGBIO Magnolia biondii HOM05M005526 ORTHO05M006459 8.9e-07 59.3 339 25.4
CALSI_Maker00029444 Calamus simplicifolius HOM05M005526 ORTHO05M006459 2.6e-06 57.8 325 25.8
Glyma.08G053300 Glycine max HOM05M005526 ORTHO05M006459 2.6e-06 57.8 333 23.4
Misin12G253500 Miscanthus sinensis HOM05M005526 ORTHO05M006459 2.6e-06 57.8 324 28.7
Zm00007a00023366 Zea mays B104 HOM05M005526 ORTHO05M006459 2.6e-06 57.8 304 27.6
Sobic.006G244300 Sorghum bicolor HOM05M005526 ORTHO05M006459 3.4e-06 57.4 320 27.8
Asa7G05270 Allium sativum HOM05M005526 ORTHO05M006459 4.4e-06 57.0 352 25.3
EJB05_39959 Eragrostis curvula HOM05M005526 ORTHO05M006459 4.4e-06 57.0 302 27.2
CDE02G3418 Ceratophyllum demersum HOM05M000498 ORTHO05M006377 5.7e-06 56.6 315 29.5
Dexi7B01G0021950 Digitaria exilis HOM05M005526 ORTHO05M006459 7.5e-06 56.2 318 26.7
Horvu_MOREX_2H01G700300 Hordeum vulgare HOM05M005526 ORTHO05M006459 7.5e-06 56.2 321 26.5
PH02Gene00462 Phyllostachys edulis HOM05M005526 ORTHO05M006459 7.5e-06 56.2 321 26.5
Glyma.05G244800 Glycine max HOM05M005526 ORTHO05M006459 9.8e-06 55.8 334 23.1
Ot_Chr6_g01903 Oropetium thomaeum HOM05M005526 ORTHO05M006459 9.8e-06 55.8 318 25.8

Aegilops tauschii (1 genes)
Allium sativum (2 genes)
Amborella trichopoda (2 genes)
Ananas comosus (1 genes)
Anthoceros agrestis (2 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (3 genes)
Cenchrus purpureus (2 genes)
Ceratophyllum demersum (3 genes)
Chara braunii (1 genes)
Chlamydomonas reinhardtii (1 genes)
Digitaria exilis (3 genes)
Dioscorea dumetorum (1 genes)
Elaeis guineensis (2 genes)
Eragrostis curvula (2 genes)
Glycine max (4 genes)
Hordeum vulgare (2 genes)
Lolium perenne (1 genes)
Magnolia biondii (4 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (2 genes)
Oryza alta (2 genes)
Oryza brachyantha (1 genes)
Oryza sativa Kitaake (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Panicum hallii (1 genes)
Phyllostachys edulis (14 genes)
Physcomitrium patens (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (1 genes)
Saccharum spontaneum (3 genes)
Secale cereale (1 genes)
Selaginella moellendorffii (2 genes)
Sequoiadendron giganteum (1 genes)
Setaria italica (1 genes)
Setaria viridis (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum dicoccoides (2 genes)
Triticum turgidum (2 genes)
Vanilla planifolia (2 genes)
Zea mays B73 (2 genes)
Zea mays B104 (5 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

Program Settings