Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sspon.02G0022210-2B Saccharum spontaneum HOM05M005089 ORTHO05M006353 1.8e-40 168.3 104 100.0
Sspon.02G0022210-1T Saccharum spontaneum HOM05M005089 ORTHO05M006353 3.4e-39 164.1 83 98.8
Sspon.02G0022210-4D Saccharum spontaneum HOM05M005089 ORTHO05M006353 3.4e-39 164.1 83 98.8
DexiUA01G0008780 Digitaria exilis HOM05M005089 ORTHO05M006353 8.4e-38 159.5 83 95.2
Misin04G087600 Miscanthus sinensis HOM05M005089 ORTHO05M006353 8.4e-38 159.5 83 95.2
Pahal.2G086500 Panicum hallii HOM05M005089 ORTHO05M006353 1.1e-37 159.1 83 95.2
Dexi2A01G0007850 Digitaria exilis HOM05M005089 ORTHO05M006353 1.9e-37 158.3 83 94.0
Dexi2B01G0007160 Digitaria exilis HOM05M005089 ORTHO05M006353 1.9e-37 158.3 83 94.0
DexiUA01G0009690 Digitaria exilis HOM05M005089 ORTHO05M006353 1.9e-37 158.3 83 94.0
Zm00001eb303710 Zea mays B73 HOM05M005089 ORTHO05M006353 4.2e-37 157.1 83 91.6
Zm00007a00017826 Zea mays B104 HOM05M005089 ORTHO05M006353 4.2e-37 157.1 83 91.6
Sobic.007G223801 Sorghum bicolor HOM05M005089 ORTHO05M006353 5.5e-37 156.8 83 94.0
PH02Gene15145 Phyllostachys edulis HOM05M005089 ORTHO05M006353 1.2e-36 155.6 82 92.7
Sobic.001G247500 Sorghum bicolor HOM05M005089 ORTHO05M006353 2.7e-36 154.5 83 92.8
GWHGAORA047118 Cenchrus purpureus HOM05M005089 ORTHO05M006353 3.5e-36 154.1 81 93.8
GWHGAORA009148 Cenchrus purpureus HOM05M005089 ORTHO05M006353 1.0e-35 152.5 81 92.6
EJB05_13410 Eragrostis curvula HOM05M005089 ORTHO05M006353 1.0e-35 152.5 79 94.9
Ot_Chr7_g26424 Oropetium thomaeum HOM05M005089 ORTHO05M006353 1.0e-35 152.5 80 92.5
Bradi1g53747 Brachypodium distachyon HOM05M005089 ORTHO05M006353 3.0e-35 151.0 83 89.2
TraesCS4A03G0029500 Triticum aestivum HOM05M005089 ORTHO05M006353 3.9e-35 150.6 83 90.4
TRITD4Av1G005130 Triticum turgidum HOM05M005089 ORTHO05M006353 3.9e-35 150.6 83 90.4
Sspon.02G0022210-1A Saccharum spontaneum HOM05M005089 ORTHO05M006353 8.7e-35 149.4 81 92.6
TraesCS4B03G0756200 Triticum aestivum HOM05M005089 ORTHO05M006353 1.1e-34 149.1 82 90.2
TraesCS4D03G0676200 Triticum aestivum HOM05M005089 ORTHO05M006353 1.1e-34 149.1 82 90.2
TRITD4Bv1G168900 Triticum turgidum HOM05M005089 ORTHO05M006353 1.1e-34 149.1 82 90.2
GWHGASIY037750 Secale cereale HOM05M005089 ORTHO05M006353 1.9e-34 148.3 83 89.2
Horvu_MOREX_4H01G433800 Hordeum vulgare HOM05M005089 ORTHO05M006353 2.5e-34 147.9 83 89.2
Seita.2G088200 Setaria italica HOM05M005089 ORTHO05M006353 2.5e-34 147.9 81 88.9
Sevir.2G091100 Setaria viridis HOM05M005089 ORTHO05M006353 2.5e-34 147.9 81 88.9
V3.Lp_chr7_0.1G1298 Lolium perenne HOM05M005089 ORTHO05M006353 1.6e-33 145.2 83 88.0
Zm00007a00045273 Zea mays B104 HOM05M005089 ORTHO05M006353 2.0e-31 138.3 116 64.7
GWHGAZTO042678 Oryza alta HOM05M005089 ORTHO05M006353 3.4e-31 137.5 74 91.9
GWHGAZTO090351 Oryza alta HOM05M005089 ORTHO05M006353 3.4e-31 137.5 74 91.9
OB07G15830 Oryza brachyantha HOM05M005089 ORTHO05M006353 5.9e-31 136.7 74 91.9
OsKitaake07g080600 Oryza sativa Kitaake HOM05M005089 ORTHO05M006353 7.7e-31 136.3 74 90.5
Os07g0229800 Oryza sativa ssp. japonica HOM05M005089 ORTHO05M006353 7.7e-31 136.3 74 90.5
Spipo22G0024400 Spirodela polyrhiza HOM05M005089 ORTHO05M006353 7.7e-31 136.3 82 82.9
Zosma02g22220 Zostera marina HOM05M005089 ORTHO05M006353 2.2e-30 134.8 80 80.0
Ma04_g00120 Musa acuminata HOM05M005089 ORTHO05M006353 3.8e-30 134.0 82 80.5
p5.00_sc00015_p0051 Elaeis guineensis HOM05M000001 ORTHO05M006353 6.5e-30 133.3 82 80.5
OsR498G0713824800.01 Oryza sativa ssp. indica HOM05M005089 ORTHO05M006353 6.5e-30 133.3 74 87.8
Aco000575 Ananas comosus HOM05M005089 ORTHO05M006353 1.1e-29 132.5 82 79.3
HPP92_019052 Vanilla planifolia HOM05M005089 ORTHO05M006353 2.5e-29 131.3 82 79.3
evm.TU.AsparagusV1_02.378.V1.1 Asparagus officinalis HOM05M005089 ORTHO05M006353 5.5e-29 130.2 82 76.8
Asa1G03233 Allium sativum HOM05M005089 ORTHO05M006353 1.4e-27 125.6 82 72.0
DDU324G0002 Dioscorea dumetorum HOM05M005089 ORTHO05M006353 3.0e-27 124.4 82 73.2
DDU334G0003 Dioscorea dumetorum HOM05M005089 ORTHO05M006353 3.0e-27 124.4 82 73.2
DDU743G0259 Dioscorea dumetorum HOM05M005089 ORTHO05M006353 3.0e-27 124.4 82 73.2
CDE04G1289 Ceratophyllum demersum HOM05M005089 ORTHO05M006353 1.1e-26 122.5 82 72.0
Glyma.02G218700 Glycine max HOM05M005089 ORTHO05M006353 1.3e-25 119.0 80 71.2
CDE12G0946 Ceratophyllum demersum HOM05M005089 ORTHO05M006353 1.7e-25 118.6 83 68.7
Potri.013G090900 Populus trichocarpa HOM05M005089 ORTHO05M006353 2.2e-25 118.2 82 70.7
AT2G40690 Arabidopsis thaliana HOM05M005089 ORTHO05M006353 3.1e-24 114.4 80 71.2
Solyc06g048920.4 Solanum lycopersicum HOM05M005089 ORTHO05M006353 2.6e-23 111.3 82 68.3
ATR1127G100 Amborella trichopoda HOM05M005089 ORTHO05M006353 5.9e-23 110.2 83 67.5
SEGI_34201 Sequoiadendron giganteum HOM05M005089 ORTHO05M006353 9.4e-21 102.8 84 60.7
Pp3c1_10090 Physcomitrium patens HOM05M005089 ORTHO05M006353 1.0e-19 99.4 81 59.3
Mapoly0076s0092 Marchantia polymorpha HOM05M005089 ORTHO05M006353 1.4e-19 99.0 83 56.6
Pp3c2_32750 Physcomitrium patens HOM05M005089 ORTHO05M006353 3.9e-19 97.4 82 59.8
AagrBONN_evm.TU.Sc2ySwM_117.1137 Anthoceros agrestis HOM05M005089 ORTHO05M006353 3.3e-18 94.4 83 57.8
Zjn_sc00030.1.g00740.1.sm.mk Zoysia japonica ssp. nagirizaki HOM05M005089 ORTHO05M006353 2.1e-12 75.1 36 97.2
CALSI_Maker00027450 Calamus simplicifolius HOM05M005089 ORTHO05M006353 8.0e-12 73.2 46 76.1
MCO03G330 Micromonas commoda HOM05M005089 ORTHO05M006353 2.0e-10 68.6 68 52.9
Sspon.02G0022210-3C Saccharum spontaneum HOM05M005089 ORTHO05M006353 7.4e-10 66.6 33 97.0
Cre12.g511150 Chlamydomonas reinhardtii HOM05M005089 ORTHO05M006353 6.3e-09 63.5 67 47.8
EJB05_53020 Eragrostis curvula HOM05M005089 ORTHO05M006353 1.4e-08 62.4 33 87.9
Zjn_sc00030.1.g00750.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M005089 ORTHO05M006353 4.1e-08 60.8 33 84.8
PRCOL_00000183 Prasinoderma coloniale HOM05M005089 ORTHO05M006353 2.0e-07 58.5 71 46.5
CALSI_Maker00017150 Calamus simplicifolius HOM05M005089 ORTHO05M006353 5.0e-06 53.9 37 70.3

Aegilops tauschii (0 genes)
Allium sativum (1 genes)
Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Anthoceros agrestis (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (2 genes)
Cenchrus purpureus (2 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chlamydomonas reinhardtii (1 genes)
Digitaria exilis (4 genes)
Dioscorea dumetorum (3 genes)
Elaeis guineensis (1 genes)
Eragrostis curvula (2 genes)
Glycine max (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Magnolia biondii (0 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (1 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (1 genes)
Oryza alta (2 genes)
Oryza brachyantha (1 genes)
Oryza sativa Kitaake (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Panicum hallii (1 genes)
Phyllostachys edulis (1 genes)
Physcomitrium patens (2 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Saccharum spontaneum (5 genes)
Secale cereale (1 genes)
Selaginella moellendorffii (0 genes)
Sequoiadendron giganteum (1 genes)
Setaria italica (1 genes)
Setaria viridis (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum dicoccoides (0 genes)
Triticum turgidum (2 genes)
Vanilla planifolia (1 genes)
Zea mays B73 (1 genes)
Zea mays B104 (2 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings