Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g150100.1 Solanum lycopersicum HOM05M004646 ORTHO05M003547 2.3e-207 724.5 362 100.0
Potri.003G114700 Populus trichocarpa HOM05M004646 ORTHO05M003547 1.7e-130 469.2 383 63.2
CDE04G0571 Ceratophyllum demersum HOM05M000103 ORTHO05M000383 3.4e-118 428.3 317 65.9
Glyma.11G253400 Glycine max HOM05M004646 ORTHO05M003547 1.1e-116 423.3 340 62.1
AT4G12240 Arabidopsis thaliana HOM05M004646 ORTHO05M003547 2.3e-114 415.6 327 63.3
Glyma.18G003600 Glycine max HOM05M004646 ORTHO05M003547 2.8e-112 408.7 313 63.3
DDU327G0011 Dioscorea dumetorum HOM05M004646 ORTHO05M003547 3.2e-100 368.6 302 58.3
DDU506G0365 Dioscorea dumetorum HOM05M004646 ORTHO05M003547 3.2e-100 368.6 302 58.3
ATR0733G121 Amborella trichopoda HOM05M004646 ORTHO05M003547 1.6e-99 366.3 346 56.6
Ma06_g05210 Musa acuminata HOM05M004646 ORTHO05M003547 5.6e-97 357.8 317 56.8
p5.00_sc00020_p0001 Elaeis guineensis HOM05M004646 ORTHO05M003547 1.1e-95 353.6 358 52.2
CALSI_Maker00028172 Calamus simplicifolius HOM05M004646 ORTHO05M003547 3.4e-94 348.6 345 52.8
SEGI_36271 Sequoiadendron giganteum HOM05M004646 ORTHO05M003547 1.3e-74 283.5 327 46.8
Spipo16G0004700 Spirodela polyrhiza HOM05M004646 ORTHO05M003547 1.8e-74 283.1 280 54.3
Mapoly0049s0076 Marchantia polymorpha HOM05M004646 ORTHO05M003547 3.1e-71 272.3 274 51.5
Pp3c10_1440 Physcomitrium patens HOM05M004646 ORTHO05M003547 4.1e-71 271.9 293 48.5
AagrBONN_evm.TU.Sc2ySwM_344.3515 Anthoceros agrestis HOM05M004646 ORTHO05M003547 9.0e-71 270.8 298 49.7
AagrBONN_evm.TU.Sc2ySwM_228.2164 Anthoceros agrestis HOM05M004646 ORTHO05M003547 1.1e-68 263.8 266 50.0
Pp3c23_7520 Physcomitrium patens HOM05M004646 ORTHO05M003547 7.2e-68 261.2 321 44.9
Mapoly0085s0068 Marchantia polymorpha HOM05M004646 ORTHO05M003547 2.7e-67 259.2 269 50.9
Mapoly0048s0102 Marchantia polymorpha HOM05M004646 ORTHO05M003547 1.8e-66 256.5 252 54.0
Pp3c2_19390 Physcomitrium patens HOM05M004646 ORTHO05M003547 5.7e-65 251.5 263 48.7
SEGI_20592 Sequoiadendron giganteum HOM05M004646 ORTHO05M003547 2.5e-60 236.1 260 45.8
Potri.014G025100 Populus trichocarpa HOM05M004646 ORTHO05M003547 9.4e-60 234.2 295 45.8
ATR0724G074 Amborella trichopoda HOM05M004646 ORTHO05M003547 1.4e-58 230.3 238 51.3
DDU844G0009 Dioscorea dumetorum HOM05M004646 ORTHO05M003547 1.1e-57 227.3 248 47.6
Zosma06g26640 Zostera marina HOM05M004646 ORTHO05M003547 1.5e-57 226.9 246 48.4
Asa6G06453 Allium sativum HOM05M004646 ORTHO05M003547 2.0e-57 226.5 290 44.5
DDU500G0345 Dioscorea dumetorum HOM05M004646 ORTHO05M003547 2.6e-57 226.1 248 47.2
Glyma.17G239900 Glycine max HOM05M004646 ORTHO05M003547 2.6e-57 226.1 248 48.4
AT5G52010 Arabidopsis thaliana HOM05M004646 ORTHO05M003547 4.4e-57 225.3 248 48.4
GWHGASIY021536 Secale cereale HOM05M004646 ORTHO05M003547 1.7e-56 223.4 247 48.2
GWHGASIY039277 Secale cereale HOM05M004646 ORTHO05M003547 1.7e-56 223.4 247 48.2
Sobic.010G052500 Sorghum bicolor HOM05M004646 ORTHO05M003547 2.2e-56 223.0 247 49.4
Bradi1g48330 Brachypodium distachyon HOM05M004646 ORTHO05M003547 2.8e-56 222.6 247 48.6
Misin19G056000 Miscanthus sinensis HOM05M004646 ORTHO05M003547 2.8e-56 222.6 247 50.2
AET7Gv20325300 Aegilops tauschii HOM05M004646 ORTHO05M003547 3.7e-56 222.2 247 47.8
EJB05_46046 Eragrostis curvula HOM05M004646 ORTHO05M003547 3.7e-56 222.2 247 49.8
PH02Gene12700 Phyllostachys edulis HOM05M004646 ORTHO05M003547 3.7e-56 222.2 247 48.2
GWHGASIY038662 Secale cereale HOM05M004646 ORTHO05M003547 3.7e-56 222.2 247 47.8
TraesCS7A03G0304000 Triticum aestivum HOM05M004646 ORTHO05M003547 3.7e-56 222.2 247 47.8
TraesCS7B03G0076400 Triticum aestivum HOM05M004646 ORTHO05M003547 3.7e-56 222.2 247 47.8
TraesCS7D03G0286700 Triticum aestivum HOM05M004646 ORTHO05M003547 3.7e-56 222.2 247 47.8
Horvu_MOREX_7H01G142200 Hordeum vulgare HOM05M004646 ORTHO05M003547 6.3e-56 221.5 247 47.8
Ma08_g17180 Musa acuminata HOM05M004646 ORTHO05M003547 6.3e-56 221.5 247 47.8
TRITD7Bv1G010450 Triticum turgidum HOM05M004646 ORTHO05M003547 6.3e-56 221.5 247 47.8
Glyma.14G084900 Glycine max HOM05M004646 ORTHO05M003547 1.1e-55 220.7 301 43.5
Misin18G056200 Miscanthus sinensis HOM05M004646 ORTHO05M003547 1.1e-55 220.7 247 48.6
GWHGAZTO037092 Oryza alta HOM05M004646 ORTHO05M003547 1.8e-55 219.9 247 48.2
OsKitaake06g047600 Oryza sativa Kitaake HOM05M004646 ORTHO05M003547 4.1e-55 218.8 247 47.8
OsR498G0611681900.01 Oryza sativa ssp. indica HOM05M004646 ORTHO05M003547 4.1e-55 218.8 247 47.8
Os06g0166200 Oryza sativa ssp. japonica HOM05M004646 ORTHO05M003547 4.1e-55 218.8 247 47.8
Pahal.4G314100 Panicum hallii HOM05M004646 ORTHO05M003547 4.1e-55 218.8 247 48.2
CBR_g49431 Chara braunii HOM05M004646 ORTHO05M003547 5.3e-55 218.4 246 46.3
PH02Gene17246 Phyllostachys edulis HOM05M004646 ORTHO05M003547 5.3e-55 218.4 247 47.8
Zjn_sc00049.1.g01360.1.sm.mk Zoysia japonica ssp. nagirizaki HOM05M004646 ORTHO05M003547 5.3e-55 218.4 247 49.0
Dexi4A01G0004950 Digitaria exilis HOM05M004646 ORTHO05M003547 7.0e-55 218.0 247 47.8
Zm00001eb271500 Zea mays B73 HOM05M004646 ORTHO05M003547 9.1e-55 217.6 247 48.6
Zm00007a00049042 Zea mays B104 HOM05M004646 ORTHO05M003547 9.1e-55 217.6 247 48.6
Seita.4G060800 Setaria italica HOM05M004646 ORTHO05M003547 1.2e-54 217.2 247 47.8
Sevir.4G058900 Setaria viridis HOM05M004646 ORTHO05M003547 1.2e-54 217.2 247 47.8
Ot_Chr10_g24042 Oropetium thomaeum HOM05M004646 ORTHO05M003547 1.6e-54 216.9 289 44.3
GWHGAZTO085954 Oryza alta HOM05M004646 ORTHO05M003547 3.5e-54 215.7 247 47.8
CALSI_Maker00046123 Calamus simplicifolius HOM05M004646 ORTHO05M003547 4.5e-54 215.3 248 46.4
SMO164G0064 Selaginella moellendorffii HOM05M004646 ORTHO05M003547 4.5e-54 215.3 258 46.5
MBI04_g26966_MAGBIO Magnolia biondii HOM05M004646 ORTHO05M003547 5.9e-54 214.9 246 45.5
GWHGAORA017217 Cenchrus purpureus HOM05M004646 ORTHO05M003547 1.0e-53 214.2 243 48.6
Dexi4B01G0005960 Digitaria exilis HOM05M004646 ORTHO05M003547 6.5e-53 211.5 247 47.4
HPP92_026431 Vanilla planifolia HOM05M004646 ORTHO05M003547 1.9e-52 209.9 208 50.5
Spipo10G0047700 Spirodela polyrhiza HOM05M004646 ORTHO05M003547 2.5e-52 209.5 246 46.7
Aco011500 Ananas comosus HOM05M004646 ORTHO05M003547 9.4e-52 207.6 250 46.8
GWHGAORA053489 Cenchrus purpureus HOM05M004646 ORTHO05M003547 5.3e-47 191.8 255 44.7
Sevir.7G135600 Setaria viridis HOM05M008850 ORTHO05M003547 9.4e-44 181.0 318 35.8
Dexi7B01G0009990 Digitaria exilis HOM05M008850 ORTHO05M003547 3.6e-43 179.1 317 36.3
Zjn_sc00194.1.g00320.1.sm.mk Zoysia japonica ssp. nagirizaki HOM05M008850 ORTHO05M003547 6.1e-43 178.3 317 35.6
Aco015266 Ananas comosus HOM05M008850 ORTHO05M003547 1.4e-42 177.2 276 39.5
EJB05_37602 Eragrostis curvula HOM05M008850 ORTHO05M003547 1.4e-42 177.2 317 36.0
Horvu_MOREX_2H01G484900 Hordeum vulgare HOM05M008850 ORTHO05M003547 3.0e-42 176.0 334 35.6
OsKitaake04g158600 Oryza sativa Kitaake HOM05M008850 ORTHO05M003547 3.0e-42 176.0 315 35.6
OsR498G0408717100.01 Oryza sativa ssp. indica HOM05M008850 ORTHO05M003547 3.0e-42 176.0 315 35.6
Os04g0464600 Oryza sativa ssp. japonica HOM05M008850 ORTHO05M003547 3.0e-42 176.0 315 35.6
Asa2G04456 Allium sativum HOM05M008850 ORTHO05M003547 1.5e-41 173.7 316 34.5
Sspon.05G0009710-1A Saccharum spontaneum HOM05M002595 ORTHO05M003547 2.0e-41 173.3 316 36.4
TraesCS2B03G0896500 Triticum aestivum HOM05M008850 ORTHO05M003547 5.7e-41 171.8 317 35.0
TRIDC2BG050430 Triticum dicoccoides HOM05M008850 ORTHO05M003547 5.7e-41 171.8 317 35.0
TRITD2Bv1G163840 Triticum turgidum HOM05M008850 ORTHO05M003547 5.7e-41 171.8 317 35.0
Bradi5g12650 Brachypodium distachyon HOM05M008850 ORTHO05M003547 7.5e-41 171.4 316 35.8
Pahal.7G181200 Panicum hallii HOM05M008850 ORTHO05M003547 2.2e-40 169.9 317 34.7
AET2Gv20741200 Aegilops tauschii HOM05M008850 ORTHO05M003547 2.8e-40 169.5 316 35.8
TraesCS2D03G0752100 Triticum aestivum HOM05M008850 ORTHO05M003547 2.8e-40 169.5 316 35.8
Dexi7A01G0009090 Digitaria exilis HOM05M008850 ORTHO05M003547 3.7e-40 169.1 317 35.0
GWHGASIY009198 Secale cereale HOM05M008850 ORTHO05M003547 6.3e-40 168.3 317 35.0
Zm00001eb080470 Zea mays B73 HOM05M008850 ORTHO05M003547 6.3e-40 168.3 316 35.1
TraesCS2A03G0811700 Triticum aestivum HOM05M008850 ORTHO05M003547 8.3e-40 167.9 317 35.3
Sobic.006G109850 Sorghum bicolor HOM05M008850 ORTHO05M003547 2.4e-39 166.4 316 36.1
V3.Lp_chr2_0G16018 Lolium perenne HOM05M008850 ORTHO05M003547 1.2e-38 164.1 319 35.1
Ot_Chr6_g22708 Oropetium thomaeum HOM05M008850 ORTHO05M003547 7.7e-38 161.4 317 35.6
OB06G14080 Oryza brachyantha HOM05M004646 ORTHO05M003547 2.8e-35 152.9 220 41.8
Seita.7G127600 Setaria italica HOM05M008850 ORTHO05M003547 4.7e-35 152.1 318 33.3
TRITD2Av1G200420 Triticum turgidum HOM05M008850 ORTHO05M003547 3.0e-34 149.4 237 39.2
Zosma02g19730 Zostera marina HOM05M008850 ORTHO05M003547 1.2e-33 147.5 294 35.4
PH02Gene39739 Phyllostachys edulis HOM05M004646 ORTHO05M003547 4.3e-28 129.0 140 50.7
Asa6G03266 Allium sativum HOM05M004646 ORTHO05M003547 1.8e-26 123.6 127 48.0
TRITD7Av1G038250 Triticum turgidum HOM05M004646 ORTHO05M003547 1.8e-26 123.6 147 46.9
GWHGAORA061929 Cenchrus purpureus HOM05M008850 ORTHO05M003547 1.4e-23 114.0 268 31.7
HPP92_026430 Vanilla planifolia HOM05M008850 ORTHO05M003547 6.6e-21 105.1 111 47.7
HPP92_010375 Vanilla planifolia HOM05M004646 ORTHO05M003547 4.3e-20 102.4 137 43.1
Asa5G00456 Allium sativum HOM05M008850 ORTHO05M003547 6.8e-18 95.1 160 35.0
SMO172G0037 Selaginella moellendorffii HOM05M004646 ORTHO05M003547 2.6e-17 93.2 273 31.5
Cre11.g481115 Chlamydomonas reinhardtii HOM05M004646 ORTHO05M003547 3.7e-16 89.4 182 31.9
V3.Lp_chr7_0.1G2254 Lolium perenne HOM05M004646 ORTHO05M003547 1.4e-15 87.4 84 50.0
SMO353G0301 Selaginella moellendorffii HOM05M004646 ORTHO05M003547 9.2e-15 84.7 187 34.2
Asa5G00455 Allium sativum HOM05M008850 ORTHO05M003547 2.7e-14 83.2 133 36.1
TRIDC2AG047930 Triticum dicoccoides HOM05M008850 ORTHO05M003547 4.6e-14 82.4 134 36.6
GWHGAZTO036199 Oryza alta HOM05M004646 ORTHO05M003547 7.8e-14 81.6 97 42.3
PH02Gene16370 Phyllostachys edulis HOM05M008850 ORTHO05M003547 1.0e-13 81.3 121 38.8
SEGI_05062 Sequoiadendron giganteum HOM05M004646 ORTHO05M003547 3.0e-13 79.7 137 39.4
GWHGAZTO014188 Oryza alta HOM05M004646 ORTHO05M003547 3.6e-11 72.8 97 40.2
GWHGAZTO079658 Oryza alta HOM05M002595 ORTHO05M003153 4.4e-09 65.9 131 33.6
p5.00_sc00004_p0013 Elaeis guineensis HOM05M004646 ORTHO05M003547 8.3e-08 61.6 80 41.2
CDE04G2077 Ceratophyllum demersum HOM05M000003 ORTHO05M002723 1.4e-07 60.8 48 52.1


User provided reference genes

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