Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g072400.3 Solanum lycopersicum HOM05M005946 ORTHO05M007822 2.7e-236 820.8 412 100.0
Glyma.11G153378 Glycine max HOM05M005946 ORTHO05M007822 5.2e-115 417.9 397 55.9
AT5G60370 Arabidopsis thaliana HOM05M005946 ORTHO05M007822 6.4e-105 384.4 403 50.4
p5.00_sc00033_p0003 Elaeis guineensis HOM05M005946 ORTHO05M007822 1.1e-104 383.6 414 50.7
DDU059G0049 Dioscorea dumetorum HOM05M005946 ORTHO05M007822 3.9e-102 375.2 392 50.5
Ma06_g34750 Musa acuminata HOM05M005946 ORTHO05M007822 2.1e-100 369.4 380 52.4
Horvu_MOREX_7H01G157900 Hordeum vulgare HOM05M005946 ORTHO05M007822 1.4e-96 356.7 378 50.5
V3.Lp_chr7_0.1G1466 Lolium perenne HOM05M005946 ORTHO05M007822 5.4e-96 354.8 380 49.7
Aco011028 Ananas comosus HOM05M005946 ORTHO05M007822 7.1e-96 354.4 404 48.8
OsKitaake05g018100 Oryza sativa Kitaake HOM05M005946 ORTHO05M007822 6.0e-95 351.3 398 46.5
Os05g0123300 Oryza sativa ssp. japonica HOM05M005946 ORTHO05M007822 6.0e-95 351.3 398 46.5
TraesCS7A03G0333000 Triticum aestivum HOM05M005946 ORTHO05M007822 6.0e-95 351.3 289 57.4
OsR498G0509635000.01 Oryza sativa ssp. indica HOM05M005946 ORTHO05M007822 7.8e-95 350.9 398 46.5
Asa8G03462 Allium sativum HOM05M005946 ORTHO05M007822 1.3e-94 350.1 394 48.7
Pahal.3G101901 Panicum hallii HOM05M005946 ORTHO05M007822 2.3e-94 349.4 377 48.3
PH02Gene41750 Phyllostachys edulis HOM05M005946 ORTHO05M007822 3.0e-94 349.0 289 57.4
TraesCS7D03G0322000 Triticum aestivum HOM05M005946 ORTHO05M007822 3.0e-94 349.0 289 57.1
Bradi3g20690 Brachypodium distachyon HOM05M005946 ORTHO05M007822 3.9e-94 348.6 378 49.7
ATR1159G017 Amborella trichopoda HOM05M005946 ORTHO05M007822 6.6e-94 347.8 400 47.0
TraesCS7B03G0115200 Triticum aestivum HOM05M005946 ORTHO05M007822 8.7e-94 347.4 378 48.4
GWHGAORA039554 Cenchrus purpureus HOM05M005946 ORTHO05M007822 1.1e-93 347.1 377 48.0
AET7Gv20362300 Aegilops tauschii HOM05M005946 ORTHO05M007822 1.5e-93 346.7 288 56.6
Misin17G028600 Miscanthus sinensis HOM05M005946 ORTHO05M007822 1.6e-92 343.2 283 56.5
GWHGAORA004471 Cenchrus purpureus HOM05M005946 ORTHO05M007822 2.1e-92 342.8 380 47.6
Seita.3G046400 Setaria italica HOM05M005946 ORTHO05M007822 2.8e-92 342.4 377 48.3
Sevir.3G047100 Setaria viridis HOM05M005946 ORTHO05M007822 2.8e-92 342.4 377 48.3
Zm00001eb265420 Zea mays B73 HOM05M005946 ORTHO05M007822 2.8e-92 342.4 383 47.3
Ot_Chr5_g15389 Oropetium thomaeum HOM05M005946 ORTHO05M007822 3.6e-92 342.0 383 49.1
EJB05_34179 Eragrostis curvula HOM05M005946 ORTHO05M007822 4.8e-92 341.7 371 49.1
Sspon.07G0014460-1A Saccharum spontaneum HOM05M005946 ORTHO05M007822 8.1e-92 340.9 371 47.7
GWHGAZTO081575 Oryza alta HOM05M005946 ORTHO05M007822 1.8e-91 339.7 398 46.0
OB05G11790 Oryza brachyantha HOM05M005946 ORTHO05M007822 3.1e-91 339.0 289 55.4
Sobic.009G026300 Sorghum bicolor HOM05M005946 ORTHO05M007822 4.0e-91 338.6 375 47.5
evm.TU.AsparagusV1_07.389.V1.1 Asparagus officinalis HOM05M005946 ORTHO05M007822 4.4e-90 335.1 413 44.8
Sspon.07G0014460-1P Saccharum spontaneum HOM05M005946 ORTHO05M007822 1.3e-89 333.6 396 45.5
Seita.3G046200 Setaria italica HOM05M005946 ORTHO05M007822 5.4e-88 328.2 286 53.8
Sevir.3G046950 Setaria viridis HOM05M005946 ORTHO05M007822 5.4e-88 328.2 286 53.8
Sspon.07G0014460-2B Saccharum spontaneum HOM05M005946 ORTHO05M007822 1.2e-87 327.0 393 44.8
CALSI_Maker00046012 Calamus simplicifolius HOM05M005946 ORTHO05M007822 1.9e-85 319.7 434 43.3
Zosma04g25710 Zostera marina HOM05M005946 ORTHO05M007822 9.0e-83 310.8 382 46.3
CDE04G2914 Ceratophyllum demersum HOM05M005946 ORTHO05M007822 5.8e-82 308.1 373 48.0
Misin16G037100 Miscanthus sinensis HOM05M005946 ORTHO05M007822 1.4e-80 303.5 263 54.4
Sspon.07G0014470-3C Saccharum spontaneum HOM05M005946 ORTHO05M007822 4.2e-80 302.0 376 43.4
Mapoly0004s0234 Marchantia polymorpha HOM05M005946 ORTHO05M007822 2.1e-79 299.7 316 46.8
SMO143G0224 Selaginella moellendorffii HOM05M005946 ORTHO05M007822 5.6e-77 291.6 375 42.1
Pp3c24_6040 Physcomitrium patens HOM05M005946 ORTHO05M007822 3.7e-76 288.9 284 48.9
TRIDC7BG006440 Triticum dicoccoides HOM05M005946 ORTHO05M007822 3.8e-73 278.9 223 57.8
TRITD7Av1G042350 Triticum turgidum HOM05M005946 ORTHO05M007822 2.1e-71 273.1 289 50.5
TRITD7Bv1G015970 Triticum turgidum HOM05M005946 ORTHO05M007822 2.3e-70 269.6 378 42.9
CBR_g2921 Chara braunii HOM05M005946 ORTHO05M007822 8.7e-62 241.1 275 42.9
TRIDC7AG017110 Triticum dicoccoides HOM05M005946 ORTHO05M007822 7.2e-56 221.5 193 53.4
Spipo23G0032700 Spirodela polyrhiza HOM05M005946 ORTHO05M007822 1.7e-52 210.3 167 62.9
CDE07G1541 Ceratophyllum demersum HOM05M005946 ORTHO05M007822 1.0e-49 201.1 223 56.1
HPP92_013896 Vanilla planifolia HOM05M005946 ORTHO05M007822 1.6e-47 193.7 244 47.5
Glyma.20G125100 Glycine max HOM05M005946 ORTHO05M007822 1.0e-41 174.5 225 43.6
Zm00007a00048303 Zea mays B104 HOM05M005946 ORTHO05M007822 1.4e-35 154.1 383 30.3
Dexi3B01G0009840 Digitaria exilis HOM05M005946 ORTHO05M007822 8.8e-30 134.8 184 44.6
Spipo23G0032600 Spirodela polyrhiza HOM05M005946 ORTHO05M007822 1.1e-24 117.9 107 48.6
CDE07G0204 Ceratophyllum demersum HOM05M005946 ORTHO05M007822 3.6e-23 112.8 89 61.8
SEGI_18444 Sequoiadendron giganteum HOM05M005946 ORTHO05M007822 4.0e-22 109.4 77 64.9
Pahal.3G101800 Panicum hallii HOM05M005946 ORTHO05M007822 3.8e-17 92.8 80 56.2
Zjn_sc00016.1.g05400.1.sm.mk Zoysia japonica ssp. nagirizaki HOM05M005946 ORTHO05M007822 2.3e-14 83.6 144 41.7
SEGI_09926 Sequoiadendron giganteum HOM05M005946 ORTHO05M007822 1.2e-13 81.3 96 38.5
Dexi3A01G0009710 Digitaria exilis HOM05M005946 ORTHO05M007822 2.0e-13 80.5 147 39.5
Pahal.3G101750 Panicum hallii HOM05M005946 ORTHO05M007822 1.3e-12 77.8 63 54.0
Dexi3A01G0009700 Digitaria exilis HOM05M005946 ORTHO05M007822 4.9e-12 75.9 62 56.5
Zosma04g16550 Zostera marina HOM05M005946 ORTHO05M007822 3.2e-11 73.2 78 47.4
Dexi3B01G0009830 Digitaria exilis HOM05M005946 ORTHO05M007822 9.5e-08 61.6 46 60.9
AT3G57110 Arabidopsis thaliana HOM05M005946 ORTHO05M007822 1.4e-06 57.8 134 34.3
Misin18G191200 Miscanthus sinensis HOM05M005946 ORTHO05M007822 1.4e-06 57.8 50 42.0


User provided reference genes

Program Settings