Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g072360.1 Solanum lycopersicum HOM05M000010 ORTHO05M013808 7.7e-42 172.9 109 100.0
Solyc11g069990.2 Solanum lycopersicum HOM05M000010 ORTHO05M000491 1.9e-24 115.2 72 72.2
Solyc11g064770.3 Solanum lycopersicum HOM05M000010 ORTHO05M013808 9.5e-24 112.8 75 68.0
Solyc11g069620.3 Solanum lycopersicum HOM05M000010 ORTHO05M000491 4.4e-21 104.0 74 68.9
Solyc11g068360.1 Solanum lycopersicum HOM05M000010 ORTHO05M000491 5.8e-21 103.6 76 65.8
Solyc08g007630.1 Solanum lycopersicum HOM05M000010 ORTHO05M000491 1.4e-19 99.0 75 61.3
Solyc11g043090.1 Solanum lycopersicum HOM05M000010 ORTHO05M013808 1.9e-19 98.6 74 67.6
Solyc11g071390.1 Solanum lycopersicum HOM05M000010 ORTHO05M013808 3.2e-19 97.8 77 59.7
Solyc11g071430.1 Solanum lycopersicum HOM05M000010 ORTHO05M000491 9.2e-19 96.3 74 60.8
Solyc11g071420.3 Solanum lycopersicum HOM05M000010 ORTHO05M000491 1.5e-16 89.0 72 56.9
Solyc03g078300.3 Solanum lycopersicum HOM05M000010 ORTHO05M000491 3.4e-13 77.8 75 49.3
Glyma.13G195600 Glycine max HOM05M000010 ORTHO05M000491 5.1e-09 63.9 73 45.2
Glyma.13G187900 Glycine max HOM05M000010 ORTHO05M000491 8.6e-09 63.2 73 45.2
Glyma.13G190300 Glycine max HOM05M000010 ORTHO05M000491 3.3e-08 61.2 73 43.8
Glyma.13G184800 Glycine max HOM05M000010 ORTHO05M000491 5.6e-08 60.5 73 42.5
Potri.001G261300 Populus trichocarpa HOM05M000010 ORTHO05M000491 5.6e-08 60.5 67 44.8
Potri.003G200500 Populus trichocarpa HOM05M000010 ORTHO05M000491 1.2e-07 59.3 67 44.8
Potri.T127106 Populus trichocarpa HOM05M000010 ORTHO05M000491 1.2e-07 59.3 67 44.8
Glyma.13G193300 Glycine max HOM05M000010 ORTHO05M000491 2.1e-07 58.5 73 43.8
Potri.003G200080 Populus trichocarpa HOM05M000010 ORTHO05M000491 2.8e-07 58.2 67 44.8
Glyma.13G194500 Glycine max HOM05M000010 ORTHO05M000491 3.6e-07 57.8 74 44.6
Aco026288 Ananas comosus HOM05M000010 ORTHO05M000491 4.7e-07 57.4 61 45.9
Pahal.9G177900 Panicum hallii HOM05M000010 ORTHO05M010307 8.1e-07 56.6 70 41.4
PH02Gene32933 Phyllostachys edulis HOM05M000010 ORTHO05M006112 1.4e-06 55.8 55 41.8
p5.00_sc00032_p0110 Elaeis guineensis HOM05M000010 ORTHO05M000491 1.8e-06 55.5 66 45.5
Sevir.9G180200 Setaria viridis HOM05M000010 ORTHO05M010307 1.8e-06 55.5 70 41.4
Glyma.15G225200 Glycine max HOM05M000010 ORTHO05M000491 2.3e-06 55.1 76 39.5
Potri.T126506 Populus trichocarpa HOM05M000010 ORTHO05M000491 2.3e-06 55.1 67 41.8
PH02Gene07265 Phyllostachys edulis HOM05M000010 ORTHO05M006112 3.1e-06 54.7 60 41.7
GWHGAORA018718 Cenchrus purpureus HOM05M000010 ORTHO05M010307 4.0e-06 54.3 70 40.0
Misin02G160000 Miscanthus sinensis HOM05M000010 ORTHO05M010307 4.0e-06 54.3 68 39.7
Potri.003G200200 Populus trichocarpa HOM05M000010 ORTHO05M000491 4.0e-06 54.3 67 41.8
Potri.004G196100 Populus trichocarpa HOM05M000010 ORTHO05M000491 4.0e-06 54.3 73 42.5
Glyma.13G072200 Glycine max HOM05M000010 ORTHO05M000491 5.2e-06 53.9 78 42.3
Seita.9G181300 Setaria italica HOM05M000010 ORTHO05M010307 5.2e-06 53.9 70 40.0
CALSI_Maker00050103 Calamus simplicifolius HOM05M000010 ORTHO05M011233 6.8e-06 53.5 63 47.6
Ma10_g24810 Musa acuminata HOM05M000010 ORTHO05M010307 6.8e-06 53.5 57 43.9
CALSI_Maker00044652 Calamus simplicifolius HOM05M000010 ORTHO05M000491 8.9e-06 53.1 71 46.5
GWHGAORA051905 Cenchrus purpureus HOM05M000010 ORTHO05M010307 8.9e-06 53.1 70 40.0
Glyma.16G079400 Glycine max HOM05M000010 ORTHO05M000491 8.9e-06 53.1 72 47.2
Ma03_g23240 Musa acuminata HOM05M000010 ORTHO05M000491 8.9e-06 53.1 61 44.3
Ma03_g23360 Musa acuminata HOM05M000010 ORTHO05M000491 8.9e-06 53.1 74 40.5
OB03G32870 Oryza brachyantha HOM05M000010 ORTHO05M010307 8.9e-06 53.1 75 38.7
Potri.001G261600 Populus trichocarpa HOM05M000010 ORTHO05M000491 8.9e-06 53.1 77 41.6
Sspon.01G0060220-1D Saccharum spontaneum HOM05M000010 ORTHO05M010307 8.9e-06 53.1 68 39.7


User provided reference genes

Program Settings