Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g072090.2 Solanum lycopersicum HOM05M006441 ORTHO05M008031 3.1e-233 810.8 462 100.0
Potri.009G066400 Populus trichocarpa HOM05M006441 ORTHO05M008031 3.0e-180 634.8 459 76.9
Potri.001G271800 Populus trichocarpa HOM05M006441 ORTHO05M008031 8.6e-175 616.7 460 75.9
Glyma.08G113500 Glycine max HOM05M006441 ORTHO05M008031 6.4e-170 600.5 460 76.5
evm.TU.AsparagusV1_Unassigned.334.V1.1 Asparagus officinalis HOM05M006441 ORTHO05M008031 1.4e-169 599.4 459 73.2
Glyma.05G155700 Glycine max HOM05M006441 ORTHO05M008031 1.0e-167 593.2 460 75.9
p5.00_sc00530_p0004 Elaeis guineensis HOM05M006441 ORTHO05M008031 1.3e-167 592.8 459 73.2
Aco004445 Ananas comosus HOM05M006441 ORTHO05M008031 1.9e-166 589.0 467 72.6
Ma02_g04460 Musa acuminata HOM05M006441 ORTHO05M008031 6.4e-162 573.9 462 71.0
CALSI_Maker00002507 Calamus simplicifolius HOM05M006441 ORTHO05M008031 9.2e-161 570.1 459 72.1
ATR0307G025 Amborella trichopoda HOM05M006441 ORTHO05M008031 1.5e-158 562.8 461 72.2
EJB05_42459 Eragrostis curvula HOM05M006441 ORTHO05M008031 4.9e-154 547.7 460 70.9
Ot_Chr2_g06773 Oropetium thomaeum HOM05M006441 ORTHO05M008031 3.5e-152 541.6 460 69.1
Spipo29G0001100 Spirodela polyrhiza HOM05M006441 ORTHO05M008031 4.6e-152 541.2 462 69.5
DDU732G0025 Dioscorea dumetorum HOM05M006441 ORTHO05M008031 1.0e-151 540.0 472 69.1
MBI13_g00890_MAGBIO Magnolia biondii HOM05M006441 ORTHO05M008031 3.0e-151 538.5 462 63.9
Zosma06g21750 Zostera marina HOM05M006441 ORTHO05M008031 1.9e-150 535.8 466 67.4
Asa7G02361 Allium sativum HOM05M006441 ORTHO05M008031 7.3e-150 533.9 464 66.8
AT5G19485 Arabidopsis thaliana HOM05M006441 ORTHO05M008031 3.6e-149 531.6 389 70.2
PH02Gene28942 Phyllostachys edulis HOM05M006441 ORTHO05M008031 1.8e-148 529.3 460 68.5
OsKitaake06g143800 Oryza sativa Kitaake HOM05M006441 ORTHO05M008031 5.2e-148 527.7 460 68.0
OsR498G0612539300.01 Oryza sativa ssp. indica HOM05M006441 ORTHO05M008031 5.2e-148 527.7 460 68.0
Os06g0338900 Oryza sativa ssp. japonica HOM05M006441 ORTHO05M008031 5.2e-148 527.7 460 68.0
GWHGAZTO038893 Oryza alta HOM05M006441 ORTHO05M008031 2.0e-147 525.8 460 68.0
Seita.4G159900 Setaria italica HOM05M006441 ORTHO05M008031 9.9e-147 523.5 460 66.7
Horvu_MOREX_7H01G474700 Hordeum vulgare HOM05M006441 ORTHO05M008031 1.7e-146 522.7 460 67.4
OB06G21780 Oryza brachyantha HOM05M006441 ORTHO05M008031 1.7e-146 522.7 460 67.6
TraesCS7A03G0817900 Triticum aestivum HOM05M006441 ORTHO05M008031 4.9e-146 521.2 460 67.2
TRIDC7AG047490 Triticum dicoccoides HOM05M006441 ORTHO05M008031 4.9e-146 521.2 460 67.2
Pahal.4G157300 Panicum hallii HOM05M006441 ORTHO05M008031 6.4e-146 520.8 460 66.3
TraesCS7B03G0675900 Triticum aestivum HOM05M006441 ORTHO05M008031 8.4e-146 520.4 460 67.2
TRITD7Bv1G138320 Triticum turgidum HOM05M006441 ORTHO05M008031 8.4e-146 520.4 460 67.2
TRITD7Av1G176630 Triticum turgidum HOM05M006441 ORTHO05M008031 1.1e-145 520.0 460 67.0
Sevir.4G126800 Setaria viridis HOM05M006441 ORTHO05M008031 2.4e-145 518.8 460 66.5
GWHGASIY039773 Secale cereale HOM05M006441 ORTHO05M008031 3.2e-145 518.5 460 67.2
HPP92_016891 Vanilla planifolia HOM05M006441 ORTHO05M008031 4.2e-145 518.1 458 68.1
Misin02G146500 Miscanthus sinensis HOM05M006441 ORTHO05M008031 3.5e-144 515.0 462 65.2
CDE08G0498 Ceratophyllum demersum HOM05M006441 ORTHO05M008031 4.6e-144 514.6 463 59.6
Sobic.001G168900 Sorghum bicolor HOM05M006441 ORTHO05M008031 2.3e-143 512.3 462 67.3
Zm00007a00019534 Zea mays B104 HOM05M006441 ORTHO05M008031 1.6e-141 506.1 461 66.4
V3.Lp_chr7_0.1G8552 Lolium perenne HOM05M006441 ORTHO05M008031 4.8e-141 504.6 461 67.5
Sspon.01G0023300-3C Saccharum spontaneum HOM05M006441 ORTHO05M008031 1.8e-140 502.7 464 65.9
Bradi3g31760 Brachypodium distachyon HOM05M006441 ORTHO05M008031 2.2e-138 495.7 459 64.9
Sspon.01G0023300-1A Saccharum spontaneum HOM05M006441 ORTHO05M008031 1.1e-137 493.4 484 63.2
Sspon.01G0023300-2B Saccharum spontaneum HOM05M006441 ORTHO05M008031 3.2e-137 491.9 498 61.6
SEGI_36393 Sequoiadendron giganteum HOM05M006441 ORTHO05M008031 9.3e-137 490.3 462 64.9
PH02Gene41112 Phyllostachys edulis HOM05M006441 ORTHO05M008031 2.1e-136 489.2 460 65.4
AET7Gv20847300 Aegilops tauschii HOM05M006441 ORTHO05M008031 2.7e-136 488.8 460 64.1
TraesCS7D03G0802600 Triticum aestivum HOM05M006441 ORTHO05M008031 2.7e-136 488.8 460 64.1
Dexi4B01G0013830 Digitaria exilis HOM05M006441 ORTHO05M008031 1.3e-135 486.5 449 65.7
GWHGAZTO087580 Oryza alta HOM05M006441 ORTHO05M008031 1.0e-122 443.7 408 65.7
Zm00001eb051600 Zea mays B73 HOM05M006441 ORTHO05M008031 2.4e-116 422.5 365 62.2
Dexi4A01G0013790 Digitaria exilis HOM05M006441 ORTHO05M008031 1.2e-115 420.2 439 61.3
Pp3c16_600 Physcomitrium patens HOM05M006441 ORTHO05M008031 3.8e-114 415.2 463 56.6
Mapoly0070s0045 Marchantia polymorpha HOM05M006441 ORTHO05M008031 4.3e-110 401.7 467 52.5
SMO117G0151 Selaginella moellendorffii HOM05M006441 ORTHO05M008031 2.8e-101 372.5 461 50.8
Sspon.01G0045280-1T Saccharum spontaneum HOM05M000109 ORTHO05M000102 2.0e-83 313.2 390 48.7
DDU479G0250 Dioscorea dumetorum HOM05M006441 ORTHO05M008031 2.7e-80 302.8 206 75.2
Misin01G157200 Miscanthus sinensis HOM05M006441 ORTHO05M008031 7.5e-70 268.1 203 68.5
DDU479G0273 Dioscorea dumetorum HOM05M006441 ORTHO05M008031 8.6e-66 254.6 258 67.1
Mapoly0050s0011 Marchantia polymorpha HOM05M006441 ORTHO05M008031 1.9e-65 253.4 395 40.3
CBR_g54067 Chara braunii HOM05M006441 ORTHO05M008031 8.0e-64 248.1 388 40.2
TRIDC7BG040120 Triticum dicoccoides HOM05M006441 ORTHO05M008031 1.5e-62 243.8 260 64.2
Mapoly0050s0012 Marchantia polymorpha HOM05M006441 ORTHO05M008031 1.0e-58 231.1 243 53.9
PH02Gene50373 Phyllostachys edulis HOM05M006441 ORTHO05M008031 4.1e-52 209.1 260 61.2
Cre03.g207825 Chlamydomonas reinhardtii HOM05M006441 ORTHO05M008031 3.5e-51 206.1 505 40.6
MCO03G336 Micromonas commoda HOM05M006441 ORTHO05M008031 4.6e-43 179.1 399 30.8
PRCOL_00006600 Prasinoderma coloniale HOM05M006441 ORTHO05M008031 1.7e-37 160.6 513 33.5
Zjn_sc00107.1.g00900.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M006441 ORTHO05M008031 9.2e-36 154.8 104 76.0
Mapoly0070s0046 Marchantia polymorpha HOM05M006441 ORTHO05M008031 1.4e-28 131.0 156 51.9
PH02Gene49823 Phyllostachys edulis HOM05M006441 ORTHO05M008031 2.8e-24 116.7 80 73.8

Aegilops tauschii (1 genes)
Allium sativum (1 genes)
Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Anthoceros agrestis (0 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus purpureus (0 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chlamydomonas reinhardtii (1 genes)
Digitaria exilis (2 genes)
Dioscorea dumetorum (3 genes)
Elaeis guineensis (1 genes)
Eragrostis curvula (1 genes)
Glycine max (2 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Magnolia biondii (1 genes)
Marchantia polymorpha (4 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (1 genes)
Oryza alta (2 genes)
Oryza brachyantha (1 genes)
Oryza sativa Kitaake (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Panicum hallii (1 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (1 genes)
Saccharum spontaneum (4 genes)
Secale cereale (1 genes)
Selaginella moellendorffii (1 genes)
Sequoiadendron giganteum (1 genes)
Setaria italica (1 genes)
Setaria viridis (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum dicoccoides (2 genes)
Triticum turgidum (2 genes)
Vanilla planifolia (1 genes)
Zea mays B73 (1 genes)
Zea mays B104 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

Program Settings