Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g071940.1 Solanum lycopersicum HOM05M002013 ORTHO05M001990 6.8e-118 426.8 249 100.0
Solyc01g009260.1 Solanum lycopersicum HOM05M002013 ORTHO05M001990 4.7e-26 121.7 192 51.0
Glyma.12G189300 Glycine max HOM05M002013 ORTHO05M001990 1.3e-23 113.6 204 42.2
Potri.009G016600 Populus trichocarpa HOM05M002013 ORTHO05M001990 2.9e-20 102.4 177 41.8
Glyma.13G312500 Glycine max HOM05M002013 ORTHO05M001990 3.8e-20 102.1 177 50.3
Solyc01g009270.1 Solanum lycopersicum HOM05M002013 ORTHO05M001990 1.5e-19 100.1 192 45.3
MBI03_g11328_MAGBIO Magnolia biondii HOM05M002013 ORTHO05M001990 2.1e-18 96.3 222 36.5
p5.00_sc00001_p0837 Elaeis guineensis HOM05M002013 ORTHO05M001990 1.4e-17 93.6 216 36.6
Ma10_g25510 Musa acuminata HOM05M002013 ORTHO05M001990 2.3e-17 92.8 239 35.1
Potri.001G216000 Populus trichocarpa HOM05M002013 ORTHO05M001990 5.2e-17 91.7 246 32.9
p5.00_sc00031_p0145 Elaeis guineensis HOM05M002013 ORTHO05M001990 3.4e-16 89.0 190 37.4
CALSI_Maker00003197 Calamus simplicifolius HOM05M002013 ORTHO05M001990 4.4e-16 88.6 188 35.6
AT5G22090 Arabidopsis thaliana HOM05M002013 ORTHO05M001990 4.8e-15 85.1 221 34.8
HPP92_004124 Vanilla planifolia HOM05M002013 ORTHO05M001990 1.2e-13 80.5 217 32.3
Glyma.12G095200 Glycine max HOM05M002013 ORTHO05M001990 1.6e-13 80.1 174 47.1
Ma07_g11660 Musa acuminata HOM05M002013 ORTHO05M001990 2.0e-13 79.7 200 35.0
Asa4G02087 Allium sativum HOM05M002013 ORTHO05M001990 3.5e-13 79.0 165 35.2
Zjn_sc00014.1.g01530.1.am.mk Zoysia japonica ssp. nagirizaki HOM05M002013 ORTHO05M001990 3.5e-13 79.0 197 30.5
Ma10_g19600 Musa acuminata HOM05M002013 ORTHO05M001990 4.5e-13 78.6 231 32.9
Misin01G112600 Miscanthus sinensis HOM05M002013 ORTHO05M001990 5.9e-13 78.2 183 32.8
CDE06G0576 Ceratophyllum demersum HOM05M002013 ORTHO05M001990 1.0e-12 77.4 207 31.9
Ma03_g22020 Musa acuminata HOM05M002013 ORTHO05M001990 1.0e-12 77.4 178 35.4
Zosma03g02060 Zostera marina HOM05M002013 ORTHO05M001990 1.3e-12 77.0 146 45.2
Ma02_g16410 Musa acuminata HOM05M002013 ORTHO05M001990 1.7e-12 76.6 223 33.6
GWHGAZTO076174 Oryza alta HOM05M002013 ORTHO05M001990 2.9e-12 75.9 202 32.2
Seita.9G123500 Setaria italica HOM05M002013 ORTHO05M001990 2.9e-12 75.9 182 33.0
Sevir.9G122300 Setaria viridis HOM05M002013 ORTHO05M001990 2.9e-12 75.9 182 33.0
Asa2G04552 Allium sativum HOM05M002013 ORTHO05M001990 5.0e-12 75.1 178 36.0
DDU272G0502 Dioscorea dumetorum HOM05M002013 ORTHO05M001990 5.0e-12 75.1 182 43.4
PH02Gene29992 Phyllostachys edulis HOM05M002013 ORTHO05M001990 5.0e-12 75.1 197 32.5
Spipo12G0040700 Spirodela polyrhiza HOM05M002013 ORTHO05M001990 6.5e-12 74.7 252 35.7
Zjn_sc00013.1.g01580.1.sm.mk Zoysia japonica ssp. nagirizaki HOM05M002013 ORTHO05M001990 6.5e-12 74.7 167 33.5
GWHGAORA051290 Cenchrus purpureus HOM05M002013 ORTHO05M001990 8.6e-12 74.3 182 31.3
GWHGAZTO026234 Oryza alta HOM05M002013 ORTHO05M001990 8.6e-12 74.3 193 31.1
GWHGAORA019335 Cenchrus purpureus HOM05M002013 ORTHO05M001990 1.1e-11 73.9 182 31.9
Dexi9A01G0011830 Digitaria exilis HOM05M002013 ORTHO05M001990 1.1e-11 73.9 198 31.8
Ma06_g11440 Musa acuminata HOM05M002013 ORTHO05M001990 1.1e-11 73.9 182 34.6
OsKitaake03g307600 Oryza sativa Kitaake HOM05M002013 ORTHO05M001990 1.1e-11 73.9 197 32.0
OsR498G0306893700.01 Oryza sativa ssp. indica HOM05M002013 ORTHO05M001990 1.1e-11 73.9 197 32.0
Os03g0705800 Oryza sativa ssp. japonica HOM05M002013 ORTHO05M001990 1.1e-11 73.9 197 32.0
Potri.002G053400 Populus trichocarpa HOM05M002013 ORTHO05M001990 1.5e-11 73.6 190 35.8
HPP92_002189 Vanilla planifolia HOM05M002013 ORTHO05M001990 1.9e-11 73.2 181 32.6
Aco026534 Ananas comosus HOM05M002013 ORTHO05M001990 3.2e-11 72.4 188 34.6
MBI06_g47796_MAGBIO Magnolia biondii HOM05M002013 ORTHO05M001990 3.2e-11 72.4 164 36.6
Misin02G099900 Miscanthus sinensis HOM05M002013 ORTHO05M001990 4.2e-11 72.0 187 32.1
Sobic.001G121700 Sorghum bicolor HOM05M002013 ORTHO05M001990 5.5e-11 71.6 244 29.5
PH02Gene09949 Phyllostachys edulis HOM05M002013 ORTHO05M001990 7.2e-11 71.2 209 30.6
AET4Gv20079100 Aegilops tauschii HOM05M002013 ORTHO05M001990 1.2e-10 70.5 182 34.6
TraesCS4D03G0066400 Triticum aestivum HOM05M002013 ORTHO05M001990 1.2e-10 70.5 182 34.6
Zosma05g18940 Zostera marina HOM05M002013 ORTHO05M001990 1.6e-10 70.1 204 30.9
ATR0665G217 Amborella trichopoda HOM05M002013 ORTHO05M001990 4.7e-10 68.6 220 30.5
EJB05_04955 Eragrostis curvula HOM05M002013 ORTHO05M001990 6.1e-10 68.2 211 34.1
Glyma.03G153400 Glycine max HOM05M002013 ORTHO05M001990 6.1e-10 68.2 156 41.7
Ma08_g17680 Musa acuminata HOM05M002013 ORTHO05M001990 6.1e-10 68.2 210 33.8
Pahal.9G121300 Panicum hallii HOM05M002013 ORTHO05M001990 6.1e-10 68.2 184 32.1
Glyma.02G147500 Glycine max HOM05M002013 ORTHO05M001990 8.0e-10 67.8 193 32.6
Ma04_g30790 Musa acuminata HOM05M002013 ORTHO05M001990 1.0e-09 67.4 226 30.1
Sspon.01G0056740-1C Saccharum spontaneum HOM05M002013 ORTHO05M001990 1.0e-09 67.4 185 30.8
Sspon.01G0056740-1P Saccharum spontaneum HOM05M002013 ORTHO05M001990 1.0e-09 67.4 181 30.4
Ot_Chr4_g08061 Oropetium thomaeum HOM05M002013 ORTHO05M001990 1.4e-09 67.0 199 33.2
Potri.005G209100 Populus trichocarpa HOM05M002013 ORTHO05M001990 1.4e-09 67.0 173 37.0
Zm00001eb216640 Zea mays B73 HOM05M002013 ORTHO05M001990 1.8e-09 66.6 185 29.7
Zm00007a00018020 Zea mays B104 HOM05M002013 ORTHO05M001990 1.8e-09 66.6 185 29.7
Glyma.19G155800 Glycine max HOM05M002013 ORTHO05M001990 2.3e-09 66.2 180 34.4
HPP92_019218 Vanilla planifolia HOM05M002013 ORTHO05M001990 3.0e-09 65.9 228 32.0
Ma02_g24310 Musa acuminata HOM05M002013 ORTHO05M001990 5.2e-09 65.1 200 32.5
Glyma.20G143000 Glycine max HOM05M002013 ORTHO05M001990 8.8e-09 64.3 207 30.0
DDU069G0003 Dioscorea dumetorum HOM05M002013 ORTHO05M001990 1.2e-08 63.9 148 37.2
DDU486G0108 Dioscorea dumetorum HOM05M002013 ORTHO05M001990 1.2e-08 63.9 148 37.2
MBI19_g16317_MAGBIO Magnolia biondii HOM05M002013 ORTHO05M001990 1.2e-08 63.9 151 32.5
V3.Lp_chr4_0G22834 Lolium perenne HOM05M002013 ORTHO05M001990 1.5e-08 63.5 163 33.1
PH02Gene27029 Phyllostachys edulis HOM05M002013 ORTHO05M001990 2.0e-08 63.2 179 30.2
OB03G21520 Oryza brachyantha HOM05M002013 ORTHO05M001990 3.4e-08 62.4 195 34.4
Potri.008G149600 Populus trichocarpa HOM05M002013 ORTHO05M001990 3.4e-08 62.4 262 29.8
TraesCS4B03G0091700 Triticum aestivum HOM05M002013 ORTHO05M001990 3.4e-08 62.4 187 32.6
TRIDC4BG006670 Triticum dicoccoides HOM05M002013 ORTHO05M001990 3.4e-08 62.4 187 32.6
TRITD4Bv1G011860 Triticum turgidum HOM05M002013 ORTHO05M001990 3.4e-08 62.4 187 32.6
Asa7G02626 Allium sativum HOM05M002013 ORTHO05M001990 4.4e-08 62.0 168 36.9
Asa7G02627 Allium sativum HOM05M002013 ORTHO05M001990 4.4e-08 62.0 168 36.9
Glyma.10G026300 Glycine max HOM05M002013 ORTHO05M001990 4.4e-08 62.0 196 34.7
Zm00007a00004108 Zea mays B104 HOM05M002013 ORTHO05M001990 4.4e-08 62.0 141 36.9
PH02Gene03457 Phyllostachys edulis HOM05M002013 ORTHO05M001990 5.7e-08 61.6 182 31.3
TRIDC4AG042300 Triticum dicoccoides HOM05M002013 ORTHO05M001990 5.7e-08 61.6 188 32.4
GWHGASIY018330 Secale cereale HOM05M002013 ORTHO05M001990 7.5e-08 61.2 190 32.6
Glyma.10G250700 Glycine max HOM05M002013 ORTHO05M001990 9.8e-08 60.8 214 28.5
GWHGASIY018329 Secale cereale HOM05M002013 ORTHO05M001990 2.2e-07 59.7 147 35.4
Zm00001eb054430 Zea mays B73 HOM05M002013 ORTHO05M001990 2.2e-07 59.7 181 28.7
Zm00007a00023075 Zea mays B104 HOM05M002013 ORTHO05M001990 2.2e-07 59.7 181 28.7
TraesCS4A03G0702700 Triticum aestivum HOM05M002013 ORTHO05M001990 2.8e-07 59.3 185 30.3
TRITD4Av1G194410 Triticum turgidum HOM05M002013 ORTHO05M001990 2.8e-07 59.3 185 30.3
ATR0626G041 Amborella trichopoda HOM05M002013 ORTHO05M001990 4.9e-07 58.5 175 33.1
Zm00001eb011430 Zea mays B73 HOM05M002013 ORTHO05M001990 4.9e-07 58.5 141 31.9
MBI17_g45764_MAGBIO Magnolia biondii HOM05M002013 ORTHO05M001990 6.3e-07 58.2 207 31.9
Misin01G409000 Miscanthus sinensis HOM05M002013 ORTHO05M001990 6.3e-07 58.2 141 33.3
OsKitaake03g118600 Oryza sativa Kitaake HOM05M002013 ORTHO05M001990 6.3e-07 58.2 162 32.7
OsR498G0305617800.01 Oryza sativa ssp. indica HOM05M002013 ORTHO05M001990 6.3e-07 58.2 162 32.7
Os03g0261800 Oryza sativa ssp. japonica HOM05M002013 ORTHO05M001990 6.3e-07 58.2 162 32.7
TraesCS5B03G0004400 Triticum aestivum HOM05M002013 ORTHO05M001990 6.3e-07 58.2 192 27.1
TRITD5Bv1G000450 Triticum turgidum HOM05M002013 ORTHO05M001990 6.3e-07 58.2 192 27.1
Bradi1g11050 Brachypodium distachyon HOM05M002013 ORTHO05M001990 8.3e-07 57.8 198 31.3
Horvu_MOREX_1H01G609800 Hordeum vulgare HOM05M002013 ORTHO05M001990 8.3e-07 57.8 142 35.2
Misin02G399300 Miscanthus sinensis HOM05M002013 ORTHO05M001990 8.3e-07 57.8 155 31.0
Potri.010G091800 Populus trichocarpa HOM05M002013 ORTHO05M001990 8.3e-07 57.8 199 32.2
Horvu_MOREX_4H01G041800 Hordeum vulgare HOM05M002013 ORTHO05M001990 1.1e-06 57.4 166 32.5
Pahal.9G524100 Panicum hallii HOM05M002013 ORTHO05M001990 1.1e-06 57.4 175 29.7
AET5Gv20006500 Aegilops tauschii HOM05M002013 ORTHO05M001990 1.4e-06 57.0 166 27.1
Horvu_MOREX_5H01G003200 Hordeum vulgare HOM05M002013 ORTHO05M001990 1.4e-06 57.0 144 34.7
Horvu_MOREX_5H01G003100 Hordeum vulgare HOM05M002013 ORTHO05M001990 1.8e-06 56.6 144 30.6
Solyc06g008990.1 Solanum lycopersicum HOM05M002013 ORTHO05M001990 2.4e-06 56.2 190 28.9
TraesCS5B03G0004200 Triticum aestivum HOM05M002013 ORTHO05M001990 2.4e-06 56.2 210 32.9
TRITD5Bv1G000510 Triticum turgidum HOM05M002013 ORTHO05M001990 2.4e-06 56.2 210 32.9
HPP92_013316 Vanilla planifolia HOM05M002013 ORTHO05M001990 2.4e-06 56.2 215 31.6
Asa7G00189 Allium sativum HOM05M002013 ORTHO05M001990 3.1e-06 55.8 167 33.5
Asa7G00195 Allium sativum HOM05M002013 ORTHO05M001990 3.1e-06 55.8 167 33.5
HPP92_013317 Vanilla planifolia HOM05M002013 ORTHO05M001990 3.1e-06 55.8 216 31.5
V3.Lp_chr5_0G630 Lolium perenne HOM05M002013 ORTHO05M001990 4.1e-06 55.5 180 28.9
TraesCS4A03G0178500 Triticum aestivum HOM05M002013 ORTHO05M001990 5.4e-06 55.1 143 34.3
TraesCS5D03G0005700 Triticum aestivum HOM05M002013 ORTHO05M001990 5.4e-06 55.1 166 27.1
TRIDC4AG011910 Triticum dicoccoides HOM05M002013 ORTHO05M001990 5.4e-06 55.1 143 34.3
TRITD4Av1G038710 Triticum turgidum HOM05M002013 ORTHO05M001990 5.4e-06 55.1 143 34.3
GWHGASIY030673 Secale cereale HOM05M002013 ORTHO05M001990 7.0e-06 54.7 176 28.4
Sobic.001G429700 Sorghum bicolor HOM05M002013 ORTHO05M001990 7.0e-06 54.7 185 29.2
GWHGAZTO023205 Oryza alta HOM05M002013 ORTHO05M001990 9.2e-06 54.3 140 42.1

Aegilops tauschii (2 genes)
Allium sativum (6 genes)
Amborella trichopoda (2 genes)
Ananas comosus (1 genes)
Anthoceros agrestis (0 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (0 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus purpureus (2 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (1 genes)
Dioscorea dumetorum (3 genes)
Elaeis guineensis (2 genes)
Eragrostis curvula (1 genes)
Glycine max (9 genes)
Hordeum vulgare (4 genes)
Lolium perenne (2 genes)
Magnolia biondii (4 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (4 genes)
Musa acuminata (9 genes)
Oropetium thomaeum (1 genes)
Oryza alta (3 genes)
Oryza brachyantha (1 genes)
Oryza sativa Kitaake (2 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (2 genes)
Panicum hallii (2 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (0 genes)
Populus trichocarpa (6 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (2 genes)
Secale cereale (3 genes)
Selaginella moellendorffii (0 genes)
Sequoiadendron giganteum (0 genes)
Setaria italica (1 genes)
Setaria viridis (1 genes)
Solanum lycopersicum (4 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (7 genes)
Triticum dicoccoides (3 genes)
Triticum turgidum (5 genes)
Vanilla planifolia (5 genes)
Zea mays B73 (3 genes)
Zea mays B104 (3 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings