Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g068790.2 Solanum lycopersicum HOM05M006921 ORTHO05M008683 2.1e-98 361.7 192 100.0
Glyma.11G180200 Glycine max HOM05M006921 ORTHO05M008683 1.9e-59 232.3 166 74.1
Glyma.12G093300 Glycine max HOM05M006921 ORTHO05M008683 2.5e-59 231.9 166 75.3
Potri.009G161800 Populus trichocarpa HOM05M006921 ORTHO05M008683 2.0e-56 222.2 168 72.0
AT2G27290 Arabidopsis thaliana HOM05M006921 ORTHO05M008683 3.3e-56 221.5 172 71.5
MBI17_g18935_MAGBIO Magnolia biondii HOM05M006921 ORTHO05M008683 4.8e-55 217.6 178 70.8
TraesCS2B03G0817600 Triticum aestivum HOM05M006921 ORTHO05M008683 1.7e-52 209.1 160 70.6
TRIDC3BG011630 Triticum dicoccoides HOM05M006921 ORTHO05M008683 1.7e-52 209.1 160 70.6
TRITD2Bv1G148830 Triticum turgidum HOM05M006921 ORTHO05M008683 1.7e-52 209.1 160 70.6
DDU739G0361 Dioscorea dumetorum HOM05M006921 ORTHO05M008683 1.9e-51 205.7 149 75.2
V3.Lp_chr2_0G16518 Lolium perenne HOM05M006921 ORTHO05M008683 1.9e-51 205.7 141 75.2
Horvu_MOREX_2H01G442800 Hordeum vulgare HOM05M006921 ORTHO05M008683 3.2e-51 204.9 142 76.1
Ma09_g02610 Musa acuminata HOM05M006921 ORTHO05M008683 3.2e-51 204.9 178 67.4
TraesCS2A03G0740500 Triticum aestivum HOM05M006921 ORTHO05M008683 9.4e-51 203.4 140 75.0
GWHGASIY008714 Secale cereale HOM05M006921 ORTHO05M008683 1.2e-50 203.0 147 73.5
OsKitaake04g122800 Oryza sativa Kitaake HOM05M006921 ORTHO05M008683 1.6e-50 202.6 177 62.1
OsR498G0408543300.01 Oryza sativa ssp. indica HOM05M006921 ORTHO05M008683 1.6e-50 202.6 177 62.1
Os04g0416000 Oryza sativa ssp. japonica HOM05M006921 ORTHO05M008683 1.6e-50 202.6 177 62.1
EJB05_38085 Eragrostis curvula HOM05M006921 ORTHO05M008683 2.1e-50 202.2 163 71.2
EJB05_52759 Eragrostis curvula HOM05M006921 ORTHO05M008683 2.1e-50 202.2 163 71.2
TraesCS2D03G0683400 Triticum aestivum HOM05M006921 ORTHO05M008683 2.1e-50 202.2 164 68.3
Bradi5g09630 Brachypodium distachyon HOM05M006921 ORTHO05M008683 2.7e-50 201.8 140 75.7
Aco007832 Ananas comosus HOM05M006921 ORTHO05M008683 3.6e-50 201.4 201 61.7
Ot_Chr6_g08648 Oropetium thomaeum HOM05M006921 ORTHO05M008683 3.6e-50 201.4 158 69.6
Seita.7G093700 Setaria italica HOM05M006921 ORTHO05M008683 4.7e-50 201.1 144 72.2
GWHGAZTO079184 Oryza alta HOM05M006921 ORTHO05M008683 1.0e-49 199.9 161 67.7
Sevir.7G101400 Setaria viridis HOM05M006921 ORTHO05M008683 1.8e-49 199.1 144 71.5
SEGI_25108 Sequoiadendron giganteum HOM05M006921 ORTHO05M008683 4.0e-49 198.0 180 63.9
Sobic.006G074500 Sorghum bicolor HOM05M006921 ORTHO05M008683 4.0e-49 198.0 144 70.8
Asa5G03185 Allium sativum HOM05M006921 ORTHO05M008683 5.2e-49 197.6 182 61.5
ATR0772G022 Amborella trichopoda HOM05M006921 ORTHO05M008683 5.2e-49 197.6 196 60.7
Pahal.7G142600 Panicum hallii HOM05M006921 ORTHO05M008683 5.2e-49 197.6 144 72.9
TRITD2Av1G180920 Triticum turgidum HOM05M006921 ORTHO05M008683 5.2e-49 197.6 144 72.9
Dexi7B01G0006990 Digitaria exilis HOM05M006921 ORTHO05M008683 6.7e-49 197.2 144 71.5
HPP92_023073 Vanilla planifolia HOM05M006921 ORTHO05M008683 6.7e-49 197.2 146 74.0
GWHGAORA023054 Cenchrus purpureus HOM05M006921 ORTHO05M008683 2.0e-48 195.7 144 72.2
Sspon.05G0011730-1T Saccharum spontaneum HOM05M006921 ORTHO05M008683 2.6e-48 195.3 180 61.7
Misin12G073400 Miscanthus sinensis HOM05M006921 ORTHO05M008683 7.5e-48 193.7 143 71.3
Sspon.05G0011730-1A Saccharum spontaneum HOM05M006921 ORTHO05M008683 7.5e-48 193.7 178 62.4
CBR_g30935 Chara braunii HOM05M006921 ORTHO05M008683 9.7e-48 193.4 148 70.3
OB04G19320 Oryza brachyantha HOM05M006921 ORTHO05M008683 9.7e-48 193.4 141 73.8
Sspon.05G0011730-3C Saccharum spontaneum HOM05M006921 ORTHO05M008683 9.7e-48 193.4 143 71.3
Zm00007a00029415 Zea mays B104 HOM05M006921 ORTHO05M008683 9.7e-48 193.4 160 64.4
p5.00_sc00182_p0041 Elaeis guineensis HOM05M006921 ORTHO05M008683 2.2e-47 192.2 155 71.0
Mapoly0006s0182 Marchantia polymorpha HOM05M006921 ORTHO05M008683 5.3e-46 187.6 131 75.6
CALSI_Maker00034553 Calamus simplicifolius HOM05M006921 ORTHO05M008683 9.1e-46 186.8 193 58.5
Zjn_sc00058.1.g03190.1.am.mk Zoysia japonica ssp. nagirizaki HOM05M006921 ORTHO05M008683 3.5e-45 184.9 187 59.9
CDE02G3359 Ceratophyllum demersum HOM05M006921 ORTHO05M008683 5.9e-45 184.1 119 78.2
GWHGAZTO029484 Oryza alta HOM05M006921 ORTHO05M008683 5.9e-45 184.1 190 57.4
Dexi7A01G0006100 Digitaria exilis HOM05M006921 ORTHO05M008683 1.3e-44 183.0 137 70.8
SMO146G0331 Selaginella moellendorffii HOM05M006921 ORTHO05M008683 1.7e-44 182.6 130 73.8
Pp3c14_19090 Physcomitrium patens HOM05M006921 ORTHO05M008683 8.5e-44 180.3 141 66.0
PH02Gene43493 Phyllostachys edulis HOM05M006921 ORTHO05M008683 1.1e-43 179.9 162 63.0
Sspon.05G0011730-2B Saccharum spontaneum HOM05M006921 ORTHO05M008683 1.1e-43 179.9 204 55.4
evm.TU.AsparagusV1_09.109.V1.1 Asparagus officinalis HOM05M006921 ORTHO05M008683 4.7e-42 174.5 115 80.0
Spipo13G0005500 Spirodela polyrhiza HOM05M006921 ORTHO05M008683 5.2e-41 171.0 112 81.2
AagrBONN_evm.TU.Sc2ySwM_117.22 Anthoceros agrestis HOM05M006921 ORTHO05M008683 3.7e-39 164.9 170 54.7
Zosma01g33590 Zostera marina HOM05M006921 ORTHO05M008683 9.1e-38 160.2 175 53.7
MCO12G429 Micromonas commoda HOM05M006921 ORTHO05M008683 1.3e-36 156.4 138 60.1
PRCOL_00001321 Prasinoderma coloniale HOM05M006921 ORTHO05M008683 2.3e-33 145.6 134 59.7
Cre12.g485850 Chlamydomonas reinhardtii HOM05M006921 ORTHO05M008683 5.2e-33 144.4 142 54.2
Zm00001eb422070 Zea mays B73 HOM05M006921 ORTHO05M008683 3.0e-20 102.1 99 59.6
Zm00007a00013425 Zea mays B104 HOM05M006921 ORTHO05M008683 3.9e-20 101.7 92 63.0
CDE08G1250 Ceratophyllum demersum HOM05M006921 ORTHO05M008683 4.7e-18 94.7 57 77.2
AET2Gv20673600 Aegilops tauschii HOM05M006921 ORTHO05M008683 2.6e-16 89.0 47 87.2
TRIDC2AG043060 Triticum dicoccoides HOM05M006921 ORTHO05M008683 5.8e-16 87.8 47 85.1
CALSI_Maker00009427 Calamus simplicifolius HOM05M006913 ORTHO05M009164 8.1e-10 67.4 46 67.4
Mapoly0036s0025 Marchantia polymorpha HOM05M006753 ORTHO05M008513 1.2e-08 63.5 105 37.1
Pp3c24_20200 Physcomitrium patens HOM05M006753 ORTHO05M008513 5.4e-06 54.7 128 30.5
Bradi4g36660 Brachypodium distachyon HOM05M006753 ORTHO05M008513 9.2e-06 53.9 121 32.2


User provided reference genes

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