Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g068380.1 Solanum lycopersicum HOM05M003875 ORTHO05M004538 1.5e-92 342.0 167 100.0
Solyc11g068390.1 Solanum lycopersicum HOM05M003875 ORTHO05M004538 3.6e-30 134.8 169 50.9
Potri.009G163900 Populus trichocarpa HOM05M003875 ORTHO05M004538 2.2e-16 89.0 69 56.5
Potri.004G203000 Populus trichocarpa HOM05M003875 ORTHO05M004538 3.8e-16 88.2 63 60.3
Potri.004G202900 Populus trichocarpa HOM05M003875 ORTHO05M004538 1.1e-15 86.7 62 59.7
p5.00_sc00012_p0060 Elaeis guineensis HOM05M003875 ORTHO05M004538 2.5e-15 85.5 92 46.7
Potri.009G164000 Populus trichocarpa HOM05M003875 ORTHO05M004538 1.6e-14 82.8 95 43.2
AT3G52740 Arabidopsis thaliana HOM05M003875 ORTHO05M004538 4.7e-14 81.3 89 41.6
CALSI_Maker00036659 Calamus simplicifolius HOM05M003875 ORTHO05M004538 4.7e-14 81.3 62 53.2
Aco016724 Ananas comosus HOM05M003875 ORTHO05M004538 1.0e-13 80.1 72 51.4
Ma10_g15660 Musa acuminata HOM05M003875 ORTHO05M004538 1.0e-13 80.1 65 56.9
MBI17_g08360_MAGBIO Magnolia biondii HOM05M003875 ORTHO05M004538 1.4e-13 79.7 80 45.0
Glyma.10G072000 Glycine max HOM05M003875 ORTHO05M004538 1.8e-13 79.3 64 56.2
GWHGASIY008789 Secale cereale HOM05M003875 ORTHO05M004538 1.8e-13 79.3 64 54.7
Horvu_MOREX_2H01G437100 Hordeum vulgare HOM05M003875 ORTHO05M004538 2.3e-13 79.0 75 49.3
AET2Gv20667700 Aegilops tauschii HOM05M003875 ORTHO05M004538 4.0e-13 78.2 64 53.1
Bradi5g09310 Brachypodium distachyon HOM05M003875 ORTHO05M004538 4.0e-13 78.2 76 51.3
Glyma.13G153400 Glycine max HOM05M003875 ORTHO05M004538 4.0e-13 78.2 64 54.7
TraesCS2A03G0735100 Triticum aestivum HOM05M003875 ORTHO05M004538 4.0e-13 78.2 64 53.1
TraesCS2B03G0811600 Triticum aestivum HOM05M003875 ORTHO05M004538 4.0e-13 78.2 64 53.1
TraesCS2D03G0677700 Triticum aestivum HOM05M003875 ORTHO05M004538 4.0e-13 78.2 64 53.1
TRIDC2AG042590 Triticum dicoccoides HOM05M003875 ORTHO05M004538 4.0e-13 78.2 64 53.1
TRIDC2BG045720 Triticum dicoccoides HOM05M003875 ORTHO05M004538 4.0e-13 78.2 64 53.1
TRITD2Av1G179290 Triticum turgidum HOM05M003875 ORTHO05M004538 4.0e-13 78.2 64 53.1
TRITD2Bv1G147820 Triticum turgidum HOM05M003875 ORTHO05M004538 4.0e-13 78.2 64 53.1
Asa6G07196 Allium sativum HOM05M003875 ORTHO05M004538 6.8e-13 77.4 63 52.4
GWHGAORA061580 Cenchrus purpureus HOM05M003875 ORTHO05M004538 6.8e-13 77.4 68 52.9
Ma02_g22230 Musa acuminata HOM05M003875 ORTHO05M004538 8.8e-13 77.0 65 55.4
DDU739G0158 Dioscorea dumetorum HOM05M003875 ORTHO05M004538 1.2e-12 76.6 64 51.6
evm.TU.AsparagusV1_09.45.V1.1 Asparagus officinalis HOM05M003875 ORTHO05M004538 2.0e-12 75.9 60 51.7
evm.TU.AsparagusV1_02.798.V1.1 Asparagus officinalis HOM05M003875 ORTHO05M004538 5.7e-12 74.3 81 44.4
Glyma.19G194900 Glycine max HOM05M003875 ORTHO05M004538 5.7e-12 74.3 63 52.4
OsKitaake04g120000 Oryza sativa Kitaake HOM05M003875 ORTHO05M004538 7.5e-12 73.9 59 54.2
OsR498G0408525300.01 Oryza sativa ssp. indica HOM05M003875 ORTHO05M004538 7.5e-12 73.9 59 54.2
Os04g0412100 Oryza sativa ssp. japonica HOM05M003875 ORTHO05M004538 7.5e-12 73.9 59 54.2
Spipo0G0003100 Spirodela polyrhiza HOM05M003875 ORTHO05M004538 7.5e-12 73.9 62 51.6
HPP92_006353 Vanilla planifolia HOM05M003875 ORTHO05M004538 7.5e-12 73.9 61 54.1
V3.Lp_chr2_0G15386 Lolium perenne HOM05M003875 ORTHO05M004538 9.8e-12 73.6 82 42.7
Spipo7G0035300 Spirodela polyrhiza HOM05M003875 ORTHO05M004538 9.8e-12 73.6 63 50.8
Ot_Chr6_g08674 Oropetium thomaeum HOM05M003875 ORTHO05M004538 1.7e-11 72.8 67 50.7
Pahal.7G139200 Panicum hallii HOM05M003875 ORTHO05M004538 1.7e-11 72.8 58 53.4
ATR0016G013 Amborella trichopoda HOM05M003875 ORTHO05M004538 2.2e-11 72.4 77 44.2
PH02Gene06187 Phyllostachys edulis HOM05M003875 ORTHO05M004538 2.2e-11 72.4 66 50.0
Seita.7G090200 Setaria italica HOM05M003875 ORTHO05M004538 2.8e-11 72.0 57 54.4
Sevir.7G098100 Setaria viridis HOM05M003875 ORTHO05M004538 2.8e-11 72.0 57 54.4
Zjn_sc00006.1.g03940.1.am.mk Zoysia japonica ssp. nagirizaki HOM05M000528 ORTHO05M000571 2.8e-11 72.0 63 52.4
GWHGAORA023084 Cenchrus purpureus HOM05M003875 ORTHO05M004538 3.7e-11 71.6 75 49.3
GWHGAZTO029442 Oryza alta HOM05M003875 ORTHO05M004538 3.7e-11 71.6 57 54.4
Zjn_sc00058.1.g03370.1.am.mk Zoysia japonica ssp. nagirizaki HOM05M003875 ORTHO05M004538 3.7e-11 71.6 68 52.9
Sspon.05G0011950-2C Saccharum spontaneum HOM05M003875 ORTHO05M004538 4.9e-11 71.2 57 52.6
Sobic.006G068900 Sorghum bicolor HOM05M003875 ORTHO05M004538 4.9e-11 71.2 57 52.6
GWHGAZTO079125 Oryza alta HOM05M003875 ORTHO05M004538 6.3e-11 70.9 66 50.0
OB04G18940 Oryza brachyantha HOM05M003875 ORTHO05M004538 6.3e-11 70.9 57 54.4
Glyma.03G195300 Glycine max HOM05M003875 ORTHO05M004538 8.3e-11 70.5 63 49.2
Misin12G070500 Miscanthus sinensis HOM05M003875 ORTHO05M004538 8.3e-11 70.5 56 53.6
Bradi3g44900 Brachypodium distachyon HOM05M003875 ORTHO05M004538 1.1e-10 70.1 73 45.2
Zm00001eb421910 Zea mays B73 HOM05M003875 ORTHO05M004538 1.1e-10 70.1 57 50.9
Zm00007a00002904 Zea mays B104 HOM05M003875 ORTHO05M004538 1.1e-10 70.1 57 50.9
Ot_Chr1_g11350 Oropetium thomaeum HOM05M003875 ORTHO05M004538 1.4e-10 69.7 78 44.9
Sspon.05G0011950-1A Saccharum spontaneum HOM05M003875 ORTHO05M004538 1.4e-10 69.7 57 52.6
GWHGAZTO018822 Oryza alta HOM05M003875 ORTHO05M004538 2.4e-10 68.9 78 43.6
PH02Gene26436 Phyllostachys edulis HOM05M003875 ORTHO05M004538 4.1e-10 68.2 78 44.9
Sspon.05G0011950-3D Saccharum spontaneum HOM05M003875 ORTHO05M004538 4.1e-10 68.2 55 50.9
EJB05_38122 Eragrostis curvula HOM05M000543 ORTHO05M000738 5.4e-10 67.8 67 47.8
p5.00_sc00531_p0005 Elaeis guineensis HOM05M003875 ORTHO05M004538 7.0e-10 67.4 62 45.2
Aco029153 Ananas comosus HOM05M003875 ORTHO05M004538 9.2e-10 67.0 59 49.2
CALSI_Maker00027605 Calamus simplicifolius HOM05M003875 ORTHO05M004538 9.2e-10 67.0 45 57.8
p5.00_sc00531_p0004 Elaeis guineensis HOM05M003875 ORTHO05M004538 9.2e-10 67.0 63 47.6
OsKitaake02g194800 Oryza sativa Kitaake HOM05M003875 ORTHO05M004538 9.2e-10 67.0 79 41.8
OsR498G0203997700.01 Oryza sativa ssp. indica HOM05M003875 ORTHO05M004538 9.2e-10 67.0 79 41.8
Os02g0532800 Oryza sativa ssp. japonica HOM05M003875 ORTHO05M004538 9.2e-10 67.0 79 41.8
AT3G44450 Arabidopsis thaliana HOM05M003875 ORTHO05M004538 1.2e-09 66.6 78 47.4
Misin08G153600 Miscanthus sinensis HOM05M003875 ORTHO05M004538 1.6e-09 66.2 82 42.7
Sspon.04G0010890-2B Saccharum spontaneum HOM05M003875 ORTHO05M004538 2.0e-09 65.9 82 42.7
Sspon.04G0010890-3D Saccharum spontaneum HOM05M003875 ORTHO05M004538 2.0e-09 65.9 82 42.7
Sobic.004G165500 Sorghum bicolor HOM05M003875 ORTHO05M004538 2.0e-09 65.9 83 42.2
Pahal.1G254500 Panicum hallii HOM05M003875 ORTHO05M004538 2.7e-09 65.5 63 49.2
Zjn_sc00020.1.g01850.1.am.mk Zoysia japonica ssp. nagirizaki HOM05M000528 ORTHO05M000571 2.7e-09 65.5 73 46.6
CDE02G3769 Ceratophyllum demersum HOM05M003875 ORTHO05M004538 3.5e-09 65.1 112 32.1
GWHGAZTO070451 Oryza alta HOM05M003875 ORTHO05M004538 3.5e-09 65.1 68 45.6
Sevir.1G183600 Setaria viridis HOM05M003875 ORTHO05M004538 3.5e-09 65.1 80 42.5
GWHGAORA023878 Cenchrus purpureus HOM05M003875 ORTHO05M004538 4.5e-09 64.7 70 45.7
Dexi1B01G0014800 Digitaria exilis HOM05M003875 ORTHO05M004538 4.5e-09 64.7 101 36.6
Zm00001eb083970 Zea mays B73 HOM05M003875 ORTHO05M004538 4.5e-09 64.7 57 50.9
Zm00001eb242760 Zea mays B73 HOM05M003875 ORTHO05M004538 4.5e-09 64.7 80 42.5
Zm00007a00039247 Zea mays B104 HOM05M003875 ORTHO05M004538 4.5e-09 64.7 57 50.9
Zjn_sc00017.1.g04040.1.sm.mk Zoysia japonica ssp. nagirizaki HOM05M003875 ORTHO05M004538 4.5e-09 64.7 78 42.3
Sspon.04G0010890-1A Saccharum spontaneum HOM05M003875 ORTHO05M004538 5.9e-09 64.3 78 44.9
Zm00007a00027786 Zea mays B104 HOM05M003875 ORTHO05M004538 5.9e-09 64.3 68 45.6
GWHGAORA059312 Cenchrus purpureus HOM05M003875 ORTHO05M004538 2.3e-08 62.4 66 47.0
V3.Lp_chr5_0G5936 Lolium perenne HOM05M003875 ORTHO05M004538 8.6e-08 60.5 81 42.0
Solyc09g009420.1 Solanum lycopersicum HOM05M003875 ORTHO05M004538 1.9e-07 59.3 42 57.1
PH02Gene16865 Phyllostachys edulis HOM05M003875 ORTHO05M004538 3.3e-07 58.5 42 57.1
CALSI_Maker00031271 Calamus simplicifolius HOM05M003875 ORTHO05M004538 4.3e-07 58.2 69 46.4
SEGI_39196 Sequoiadendron giganteum HOM05M003875 ORTHO05M004538 7.3e-07 57.4 69 43.5

Aegilops tauschii (1 genes)
Allium sativum (1 genes)
Amborella trichopoda (1 genes)
Ananas comosus (2 genes)
Anthoceros agrestis (0 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (3 genes)
Cenchrus purpureus (4 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (1 genes)
Dioscorea dumetorum (1 genes)
Elaeis guineensis (3 genes)
Eragrostis curvula (1 genes)
Glycine max (4 genes)
Hordeum vulgare (1 genes)
Lolium perenne (2 genes)
Magnolia biondii (1 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (2 genes)
Oryza alta (4 genes)
Oryza brachyantha (1 genes)
Oryza sativa Kitaake (2 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (2 genes)
Panicum hallii (2 genes)
Phyllostachys edulis (3 genes)
Physcomitrium patens (0 genes)
Populus trichocarpa (4 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (6 genes)
Secale cereale (1 genes)
Selaginella moellendorffii (0 genes)
Sequoiadendron giganteum (1 genes)
Setaria italica (1 genes)
Setaria viridis (2 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (3 genes)
Triticum dicoccoides (2 genes)
Triticum turgidum (2 genes)
Vanilla planifolia (1 genes)
Zea mays B73 (3 genes)
Zea mays B104 (3 genes)
Zostera marina (0 genes)
Zoysia japonica ssp. nagirizaki (4 genes)

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