Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g050770.1 Solanum lycopersicum HOM05M007081 ORTHO05M009085 3.9e-38 160.2 82 100.0
Solyc01g102770.1 Solanum lycopersicum HOM05M007081 ORTHO05M009085 2.1e-23 111.3 62 95.2
Potri.013G142548 Populus trichocarpa HOM05M007081 ORTHO05M009085 3.9e-22 107.1 62 90.3
ATCG00300 Arabidopsis thaliana HOM05M007081 ORTHO05M009085 6.7e-22 106.3 62 90.3
Glyma.01G095900 Glycine max HOM05M007081 ORTHO05M009085 2.5e-21 104.4 62 87.1
Solyc10g017950.2 Solanum lycopersicum HOM05M007081 ORTHO05M009085 9.7e-21 102.4 62 90.3
AET7Gv20365000 Aegilops tauschii HOM05M007081 ORTHO05M009085 1.3e-20 102.1 62 83.9
GWHGAORA036036 Cenchrus purpureus HOM05M007081 ORTHO05M009085 1.3e-20 102.1 62 83.9
GWHGAORA044468 Cenchrus purpureus HOM05M007081 ORTHO05M009085 1.3e-20 102.1 62 83.9
Horvu_MOREX_5H01G018000 Hordeum vulgare HOM05M007081 ORTHO05M009085 1.3e-20 102.1 62 83.9
GWHGASIY001671 Secale cereale HOM05M007081 ORTHO05M009085 1.3e-20 102.1 62 83.9
GWHGASIY019662 Secale cereale HOM05M007081 ORTHO05M009085 1.3e-20 102.1 62 83.9
GWHGASIY019889 Secale cereale HOM05M007081 ORTHO05M009085 1.3e-20 102.1 62 83.9
Seita.J018400 Setaria italica HOM05M007081 ORTHO05M009085 1.3e-20 102.1 62 83.9
Sobic.003G173116 Sorghum bicolor HOM05M007081 ORTHO05M009085 1.3e-20 102.1 62 83.9
TraesCS1B03G0871500 Triticum aestivum HOM05M007081 ORTHO05M009085 1.3e-20 102.1 62 83.9
TraesCS1D03G0463400 Triticum aestivum HOM05M007081 ORTHO05M009085 1.3e-20 102.1 62 83.9
TraesCS2D03G1328900 Triticum aestivum HOM05M007081 ORTHO05M009085 1.3e-20 102.1 62 83.9
TraesCS4D03G0346800 Triticum aestivum HOM05M007081 ORTHO05M009085 1.3e-20 102.1 62 83.9
TraesCS5A03G1142600 Triticum aestivum HOM05M007081 ORTHO05M009085 1.3e-20 102.1 62 83.9
TraesCS5D03G1012100 Triticum aestivum HOM05M007081 ORTHO05M009085 1.3e-20 102.1 62 83.9
TRITD3Av1G278790 Triticum turgidum HOM05M007081 ORTHO05M009085 1.3e-20 102.1 62 83.9
Horvu_MOREX_2H01G758900 Hordeum vulgare HOM05M007081 ORTHO05M009085 1.6e-20 101.7 62 83.9
Horvu_MOREX_2H01G762200 Hordeum vulgare HOM05M007081 ORTHO05M009085 1.6e-20 101.7 62 82.3
TRITD5Av1G235420 Triticum turgidum HOM05M007081 ORTHO05M009085 1.6e-20 101.7 62 83.9
TRIDC5AG069350 Triticum dicoccoides HOM05M007081 ORTHO05M009085 2.2e-20 101.3 62 82.3
OsKitaake01g359000 Oryza sativa Kitaake HOM05M007081 ORTHO05M009085 3.7e-20 100.5 62 82.3
OsKitaake02g155851 Oryza sativa Kitaake HOM05M007081 ORTHO05M009085 3.7e-20 100.5 62 82.3
OsKitaake03g394500 Oryza sativa Kitaake HOM05M007081 ORTHO05M009085 3.7e-20 100.5 62 82.3
OsKitaake10g082401 Oryza sativa Kitaake HOM05M007081 ORTHO05M009085 3.7e-20 100.5 62 82.3
OsR498G0611904200.01 Oryza sativa ssp. indica HOM05M007081 ORTHO05M009085 3.7e-20 100.5 62 82.3
TraesCS1B03G1088800 Triticum aestivum HOM05M007081 ORTHO05M009085 3.7e-20 100.5 62 82.3
TRITD1Bv1G206260 Triticum turgidum HOM05M007081 ORTHO05M009085 3.7e-20 100.5 62 82.3
AET1Gv20173300 Aegilops tauschii HOM05M007081 ORTHO05M009085 6.3e-20 99.8 62 82.3
Horvu_MOREX_2H01G372400 Hordeum vulgare HOM05M007081 ORTHO05M009085 6.3e-20 99.8 62 82.3
TraesCS1D03G0160300 Triticum aestivum HOM05M007081 ORTHO05M009085 6.3e-20 99.8 62 82.3
TRIDC4BG027030 Triticum dicoccoides HOM05M007081 ORTHO05M009085 6.3e-20 99.8 62 82.3
TRITD4Bv1G086580 Triticum turgidum HOM05M007081 ORTHO05M009085 6.3e-20 99.8 62 82.3
Bradi3g27288 Brachypodium distachyon HOM05M007081 ORTHO05M009085 8.2e-20 99.4 62 82.3
TraesCS4B03G0423700 Triticum aestivum HOM05M007081 ORTHO05M009085 8.2e-20 99.4 62 82.3
TRIDC4AG059820 Triticum dicoccoides HOM05M007081 ORTHO05M009085 1.8e-19 98.2 62 80.6
Horvu_MOREX_4H01G376400 Hordeum vulgare HOM05M007081 ORTHO05M009085 4.1e-19 97.1 62 80.6
TraesCS5D03G0021800 Triticum aestivum HOM05M007081 ORTHO05M009085 2.0e-18 94.7 62 80.6
Glyma.08G363500 Glycine max HOM05M007081 ORTHO05M009085 2.6e-18 94.4 62 79.0
AET4Gv20388200 Aegilops tauschii HOM05M007081 ORTHO05M009085 4.5e-18 93.6 62 79.0
Seita.9G049800 Setaria italica HOM05M007081 ORTHO05M009085 1.0e-17 92.4 60 78.3
TRIDC7BG017660 Triticum dicoccoides HOM05M007081 ORTHO05M009085 1.3e-17 92.0 62 79.0
TRIDC2AG008230 Triticum dicoccoides HOM05M007081 ORTHO05M009085 5.0e-17 90.1 66 74.2
TraesCS3D03G1051200 Triticum aestivum HOM05M007081 ORTHO05M009085 2.5e-16 87.8 62 74.2
TRIDC7AG078310 Triticum dicoccoides HOM05M007081 ORTHO05M009085 4.2e-16 87.0 53 79.2
AET3Gv21099700 Aegilops tauschii HOM05M007081 ORTHO05M009085 5.5e-16 86.7 62 71.0
Sevir.9G049100 Setaria viridis HOM05M007081 ORTHO05M009085 5.5e-16 86.7 60 75.0
Os12g0504050 Oryza sativa ssp. japonica HOM05M007081 ORTHO05M009085 9.4e-16 85.9 62 74.2
Asa0G00199 Allium sativum HOM05M007081 ORTHO05M009085 2.1e-15 84.7 53 81.1
GWHGASIY042242 Secale cereale HOM05M007081 ORTHO05M009085 2.7e-15 84.3 49 83.7
TraesCS3A03G1129300 Triticum aestivum HOM05M007081 ORTHO05M009085 1.8e-14 81.6 62 71.0
GWHGAORA015953 Cenchrus purpureus HOM05M007081 ORTHO05M009085 1.4e-11 72.0 60 63.3
Aco021891 Ananas comosus HOM05M007081 ORTHO05M009085 1.8e-11 71.6 43 86.0
TRIDC1BG051620 Triticum dicoccoides HOM05M007081 ORTHO05M009085 2.4e-11 71.2 46 78.3
SMO086G0034 Selaginella moellendorffii HOM05M007081 ORTHO05M009085 4.5e-10 67.0 61 62.3
AET5Gv20017100 Aegilops tauschii HOM05M007081 ORTHO05M009085 1.7e-09 65.1 33 87.9
TRIDC4BG057460 Triticum dicoccoides HOM05M007081 ORTHO05M009085 1.7e-09 65.1 38 78.9
TRIDC3AG049570 Triticum dicoccoides HOM05M007081 ORTHO05M009085 1.1e-08 62.4 32 87.5
Aco024692 Ananas comosus HOM05M007081 ORTHO05M056467 3.2e-08 60.8 40 70.0


User provided reference genes

Program Settings