Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g045390.3 Solanum lycopersicum HOM05M004225 ORTHO05M003248 6.4e-30 132.5 60 100.0
Potri.016G064800 Populus trichocarpa HOM05M004225 ORTHO05M003248 2.9e-22 107.1 54 87.0
Sobic.002G042400 Sorghum bicolor HOM05M004225 ORTHO05M003248 3.7e-22 106.7 54 88.9
GWHGAORA010152 Cenchrus purpureus HOM05M004225 ORTHO05M003248 4.9e-22 106.3 54 88.9
Dexi2B01G0003470 Digitaria exilis HOM05M004225 ORTHO05M003248 4.9e-22 106.3 54 88.9
V3.Lp_chr2_0G11660 Lolium perenne HOM05M004225 ORTHO05M003248 4.9e-22 106.3 54 88.9
Misin03G004500 Miscanthus sinensis HOM05M004225 ORTHO05M003248 4.9e-22 106.3 54 88.9
Misin03G007200 Miscanthus sinensis HOM05M004225 ORTHO05M003248 4.9e-22 106.3 54 88.9
Ot_Chr7_g09516 Oropetium thomaeum HOM05M004225 ORTHO05M003248 4.9e-22 106.3 54 88.9
OB07G13020 Oryza brachyantha HOM05M004225 ORTHO05M003248 4.9e-22 106.3 54 88.9
Pahal.2G033800 Panicum hallii HOM05M004225 ORTHO05M003248 4.9e-22 106.3 54 88.9
PH02Gene22279 Phyllostachys edulis HOM05M004225 ORTHO05M003248 4.9e-22 106.3 54 88.9
Seita.2G041800 Setaria italica HOM05M004225 ORTHO05M003248 4.9e-22 106.3 54 88.9
Sevir.2G045900 Setaria viridis HOM05M004225 ORTHO05M003248 4.9e-22 106.3 54 88.9
Zm00001eb117230 Zea mays B73 HOM05M004225 ORTHO05M003248 4.9e-22 106.3 54 88.9
AET2Gv20558300 Aegilops tauschii HOM05M004225 ORTHO05M003248 1.1e-21 105.1 54 87.0
AET6Gv20874200 Aegilops tauschii HOM05M004225 ORTHO05M003248 1.1e-21 105.1 54 87.0
Bradi1g56880 Brachypodium distachyon HOM05M004225 ORTHO05M003248 1.1e-21 105.1 54 87.0
GWHGASIY008433 Secale cereale HOM05M004225 ORTHO05M003248 1.1e-21 105.1 54 87.0
TraesCS2A03G0589400 Triticum aestivum HOM05M004225 ORTHO05M003248 1.1e-21 105.1 54 87.0
TraesCS2D03G0573100 Triticum aestivum HOM05M004225 ORTHO05M003248 1.1e-21 105.1 54 87.0
TraesCS6D03G0781400 Triticum aestivum HOM05M004225 ORTHO05M003248 1.1e-21 105.1 54 87.0
TraesCS6A03G0910600 Triticum aestivum HOM05M004225 ORTHO05M003248 1.4e-21 104.8 54 87.0
TRITD6Av1G209270 Triticum turgidum HOM05M004225 ORTHO05M003248 1.4e-21 104.8 54 87.0
TraesCS2B03G0676300 Triticum aestivum HOM05M004225 ORTHO05M003248 2.4e-21 104.0 54 85.2
TRIDC2BG037810 Triticum dicoccoides HOM05M004225 ORTHO05M003248 2.4e-21 104.0 54 85.2
TRIDC6AG053280 Triticum dicoccoides HOM05M004225 ORTHO05M003248 3.2e-21 103.6 54 85.2
OsKitaake07g042100 Oryza sativa Kitaake HOM05M004225 ORTHO05M003248 4.1e-21 103.2 54 87.0
AT5G06580 Arabidopsis thaliana HOM05M004225 ORTHO05M003248 5.4e-21 102.8 54 85.2
TRITD6Bv1G205710 Triticum turgidum HOM05M004225 ORTHO05M003248 5.4e-21 102.8 54 83.3
TRITD2Av1G131170 Triticum turgidum HOM05M004225 ORTHO05M003248 7.1e-21 102.4 54 85.2
TRIDC6BG062000 Triticum dicoccoides HOM05M004225 ORTHO05M003248 9.2e-21 102.1 54 85.2
EJB05_15032 Eragrostis curvula HOM05M004225 ORTHO05M003248 1.6e-20 101.3 56 85.7
MBI11_g39498_MAGBIO Magnolia biondii HOM05M004225 ORTHO05M003248 1.6e-20 101.3 54 83.3
Asa3G03678 Allium sativum HOM05M004225 ORTHO05M003248 2.7e-20 100.5 54 83.3
Horvu_MOREX_2H01G474800 Hordeum vulgare HOM05M004225 ORTHO05M003248 3.5e-20 100.1 54 83.3
Spipo2G0002900 Spirodela polyrhiza HOM05M004225 ORTHO05M003248 4.6e-20 99.8 54 83.3
Aco005152 Ananas comosus HOM05M004225 ORTHO05M003248 6.0e-20 99.4 54 83.3
evm.TU.AsparagusV1_01.3379.V1.1 Asparagus officinalis HOM05M004225 ORTHO05M003248 7.8e-20 99.0 54 81.5
Dexi2A01G0003620 Digitaria exilis HOM05M004225 ORTHO05M003248 7.8e-20 99.0 62 77.4
CDE07G2068 Ceratophyllum demersum HOM05M004225 ORTHO05M003248 1.0e-19 98.6 54 83.3
HPP92_012150 Vanilla planifolia HOM05M004225 ORTHO05M003248 1.0e-19 98.6 54 79.6
Asa3G01033 Allium sativum HOM05M004225 ORTHO05M003248 2.3e-19 97.4 52 80.8
Ma09_g26330 Musa acuminata HOM05M004225 ORTHO05M003248 2.3e-19 97.4 54 81.5
Ma09_g10060 Musa acuminata HOM05M004225 ORTHO05M003248 3.0e-19 97.1 54 83.3
Aco002195 Ananas comosus HOM05M004225 ORTHO05M003248 5.1e-19 96.3 54 79.6
CALSI_Maker00031363 Calamus simplicifolius HOM05M004225 ORTHO05M003248 5.1e-19 96.3 54 81.5
Zosma05g33100 Zostera marina HOM05M004225 ORTHO05M003248 6.6e-19 95.9 54 81.5
Pp3c24_4090 Physcomitrium patens HOM05M004225 ORTHO05M003248 9.9e-15 82.0 54 68.5
Mapoly0056s0055 Marchantia polymorpha HOM05M004225 ORTHO05M003248 4.9e-14 79.7 54 63.0
CBR_g59429 Chara braunii HOM05M000575 ORTHO05M000358 8.4e-14 79.0 52 63.5
AagrBONN_evm.TU.Sc2ySwM_228.4653 Anthoceros agrestis HOM05M004225 ORTHO05M003248 1.1e-13 78.6 54 64.8
Zm00007a00051989 Zea mays B104 HOM05M004225 ORTHO05M003248 5.4e-13 76.3 38 89.5
Pp3c20_18170 Physcomitrium patens HOM05M004225 ORTHO05M003248 9.2e-13 75.5 54 63.0
Zjn_sc00030.1.g03450.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M004225 ORTHO05M003248 9.2e-13 75.5 40 85.0
Cre10.g434900 Chlamydomonas reinhardtii HOM05M004225 ORTHO05M003248 1.2e-09 65.1 49 59.2
PRCOL_00003029 Prasinoderma coloniale HOM05M004225 ORTHO05M003248 2.4e-08 60.8 51 54.9
MCO11G780 Micromonas commoda HOM05M004225 ORTHO05M003248 2.2e-06 54.3 47 53.2


User provided reference genes

Program Settings